RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SPINK7P58062 85 aa8.21□□□□□ -1.1
RTFDC1-207ENST00000477573 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
RTFDC1-207ENST00000477573 A0A096LPF7 62 aa8.2□□□□□ -1.1
RTFDC1-207ENST00000477573 RETNLBQ9BQ08 111 aa8.2□□□□□ -1.1
RTFDC1-207ENST00000477573 IGLV7-46A0A075B6I9 117 aa8.18□□□□□ -1.1
RTFDC1-207ENST00000477573 DNAH3Q8TD57 4116 aa8.18□□□□□ -1.1
RTFDC1-207ENST00000477573 K7EQZ3 153 aa8.18□□□□□ -1.1
RTFDC1-207ENST00000477573 KPRPQ5T749 579 aaPredicted RBP8.18□□□□□ -1.1
RTFDC1-207ENST00000477573 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
RTFDC1-207ENST00000477573 ANK2Q01484 3957 aa8.17□□□□□ -1.1
RTFDC1-207ENST00000477573 H3BNG1 76 aa8.16□□□□□ -1.1
RTFDC1-207ENST00000477573 RTL8CO15255 209 aa8.16□□□□□ -1.1
RTFDC1-207ENST00000477573 LELP1Q5T871 98 aa8.16□□□□□ -1.1
RTFDC1-207ENST00000477573 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
RTFDC1-207ENST00000477573 LINC00528Q8N1L1 170 aa8.16□□□□□ -1.1
RTFDC1-207ENST00000477573 H0Y9P7 68 aa8.15□□□□□ -1.11
RTFDC1-207ENST00000477573 IGKV2D-24A0A075B6R9 120 aa8.14□□□□□ -1.11
RTFDC1-207ENST00000477573 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
RTFDC1-207ENST00000477573 SPRR4Q96PI1 79 aa8.14□□□□□ -1.11
RTFDC1-207ENST00000477573 NOTCH1P46531 2555 aa8.14□□□□□ -1.11
RTFDC1-207ENST00000477573 A0A0J9YWU9 116 aa8.13□□□□□ -1.11
RTFDC1-207ENST00000477573 ANGP03950 147 aaKnown RBP8.13□□□□□ -1.11
RTFDC1-207ENST00000477573 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
RTFDC1-207ENST00000477573 Q8NBF4 154 aa8.12□□□□□ -1.11
RTFDC1-207ENST00000477573 A0A1W2PNM2 257 aa8.11□□□□□ -1.11
RTFDC1-207ENST00000477573 REG3AQ06141 175 aa8.11□□□□□ -1.11
RTFDC1-207ENST00000477573 CLPSL2Q6UWE3 100 aa8.11□□□□□ -1.11
RTFDC1-207ENST00000477573 NBEAL1Q6ZS30 2694 aa8.1□□□□□ -1.11
RTFDC1-207ENST00000477573 CHCHD10Q8WYQ3 142 aaPredicted RBP8.08□□□□□ -1.12
RTFDC1-207ENST00000477573 DEFB131BA0A096LNP1 70 aa8.08□□□□□ -1.12
RTFDC1-207ENST00000477573 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
RTFDC1-207ENST00000477573 IGHV6-1A0A0B4J1U7 121 aa8.07□□□□□ -1.12
RTFDC1-207ENST00000477573 K7EIL1 84 aa8.07□□□□□ -1.12
RTFDC1-207ENST00000477573 KRTAP29-1A8MX34 341 aaPredicted RBP8.06□□□□□ -1.12
RTFDC1-207ENST00000477573 TENM3Q9P273 2699 aa8.06□□□□□ -1.12
RTFDC1-207ENST00000477573 C1orf137Q5JT78 98 aa8.05□□□□□ -1.12
RTFDC1-207ENST00000477573 PRR34Q9NV39 138 aa8.05□□□□□ -1.12
RTFDC1-207ENST00000477573 MGAM2Q2M2H8 2515 aa8.05□□□□□ -1.12
RTFDC1-207ENST00000477573 IGLV10-54A0A075B6I4 117 aa8.05□□□□□ -1.12
RTFDC1-207ENST00000477573 TNP2Q05952 138 aa8.05□□□□□ -1.12
RTFDC1-207ENST00000477573 Q8N377 158 aa8.05□□□□□ -1.12
RTFDC1-207ENST00000477573 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
RTFDC1-207ENST00000477573 UNQ6190/PRO20217Q6UXQ8 127 aa8.03□□□□□ -1.12
RTFDC1-207ENST00000477573 IGLV1-50A0A075B6I6 118 aa8.01□□□□□ -1.13
RTFDC1-207ENST00000477573 CSAG1Q6PB30 78 aa8.01□□□□□ -1.13
RTFDC1-207ENST00000477573 WFDC10BQ8IUB3 73 aa8.01□□□□□ -1.13
RTFDC1-207ENST00000477573 IGLV5-37A0A075B6J1 123 aa8□□□□□ -1.13
RTFDC1-207ENST00000477573 HUWE1Q7Z6Z7 4374 aaKnown RBP7.99□□□□□ -1.13
RTFDC1-207ENST00000477573 C1orf134Q5TEV5 83 aa7.99□□□□□ -1.13
RTFDC1-207ENST00000477573 LINC01556Q5JQF7 62 aa7.98□□□□□ -1.13
RTFDC1-207ENST00000477573 SPATA8Q6RVD6 105 aa7.98□□□□□ -1.13
RTFDC1-207ENST00000477573 Q6ZR54 194 aa7.98□□□□□ -1.13
RTFDC1-207ENST00000477573 DEFB116Q30KQ4 102 aa7.97□□□□□ -1.13
RTFDC1-207ENST00000477573 C7orf33Q8WU49 177 aa7.97□□□□□ -1.13
RTFDC1-207ENST00000477573 DHRS4-AS1Q9P1J3 65 aa7.96□□□□□ -1.14
RTFDC1-207ENST00000477573 ROMO1P60602 79 aa7.95□□□□□ -1.14
RTFDC1-207ENST00000477573 DEFB105AQ8NG35 78 aa7.95□□□□□ -1.14
RTFDC1-207ENST00000477573 HRES1P13985 223 aa7.94□□□□□ -1.14
RTFDC1-207ENST00000477573 XAGE1AQ9HD64 81 aa7.94□□□□□ -1.14
RTFDC1-207ENST00000477573 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
RTFDC1-207ENST00000477573 DNAH10OSP0CZ25 163 aa7.94□□□□□ -1.14
RTFDC1-207ENST00000477573 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
RTFDC1-207ENST00000477573 C6orf48Q9UBA6 75 aa7.92□□□□□ -1.14
RTFDC1-207ENST00000477573 DNAH9Q9NYC9 4486 aa7.9□□□□□ -1.14
RTFDC1-207ENST00000477573 KRTAP26-1Q6PEX3 210 aa7.9□□□□□ -1.14
RTFDC1-207ENST00000477573 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
RTFDC1-207ENST00000477573 STAB2Q8WWQ8 2551 aa7.87□□□□□ -1.15
RTFDC1-207ENST00000477573 TP53AIP1Q9HCN2 124 aa7.87□□□□□ -1.15
RTFDC1-207ENST00000477573 REG3GQ6UW15 175 aa7.86□□□□□ -1.15
RTFDC1-207ENST00000477573 PCOTHQ58A44 107 aa7.86□□□□□ -1.15
RTFDC1-207ENST00000477573 C15orf56Q8N910 161 aa7.86□□□□□ -1.15
RTFDC1-207ENST00000477573 A8MWP4 228 aa7.85□□□□□ -1.15
RTFDC1-207ENST00000477573 Q6ZRX8 168 aa7.85□□□□□ -1.15
RTFDC1-207ENST00000477573 COL7A1Q02388 2944 aa7.83□□□□□ -1.16
RTFDC1-207ENST00000477573 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
RTFDC1-207ENST00000477573 UQCR11O14957 56 aa7.81□□□□□ -1.16
RTFDC1-207ENST00000477573 UBE2DNLQ8IWF7 75 aa7.81□□□□□ -1.16
RTFDC1-207ENST00000477573 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
RTFDC1-207ENST00000477573 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
RTFDC1-207ENST00000477573 NUPR2A6NF83 97 aa7.79□□□□□ -1.16
RTFDC1-207ENST00000477573 APLNQ9ULZ1 77 aa7.79□□□□□ -1.16
RTFDC1-207ENST00000477573 DNAH1Q9P2D7 4330 aa7.79□□□□□ -1.16
RTFDC1-207ENST00000477573 A0A1B0GU69 56 aa7.78□□□□□ -1.16
RTFDC1-207ENST00000477573 KRTAP4-16G5E9R7 235 aaPredicted RBP7.78□□□□□ -1.16
RTFDC1-207ENST00000477573 ZNF861PO60384 105 aa7.78□□□□□ -1.16
RTFDC1-207ENST00000477573 RPL37AP61513 92 aaKnown RBP7.78□□□□□ -1.16
RTFDC1-207ENST00000477573 IGLV8-61A0A075B6I0 122 aa7.77□□□□□ -1.17
RTFDC1-207ENST00000477573 A0A087WSZ3 146 aa7.77□□□□□ -1.17
RTFDC1-207ENST00000477573 IGFL1Q6UW32 110 aa7.77□□□□□ -1.17
RTFDC1-207ENST00000477573 SPRR1AP35321 89 aa7.76□□□□□ -1.17
RTFDC1-207ENST00000477573 KRTAP25-1Q3LHN0 102 aa7.76□□□□□ -1.17
RTFDC1-207ENST00000477573 MMP24-AS1A0A0U1RRL7 71 aa7.74□□□□□ -1.17
RTFDC1-207ENST00000477573 TLX1NBP0CAT3 122 aa7.74□□□□□ -1.17
RTFDC1-207ENST00000477573 ACYP2P14621 99 aa7.73□□□□□ -1.17
RTFDC1-207ENST00000477573 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
RTFDC1-207ENST00000477573 LINC00472Q9H8W2 130 aa7.71□□□□□ -1.17
RTFDC1-207ENST00000477573 PRKDCP78527 4128 aaKnown RBP7.71□□□□□ -1.17
RTFDC1-207ENST00000477573 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
RTFDC1-207ENST00000477573 RPL37AP8A6NKH3 93 aa7.7□□□□□ -1.18
RTFDC1-207ENST00000477573 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms