RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 A0A0U1RQV1 116 aa7.14□□□□□ -1.27
COL27A1-204ENST00000477421 HCG22E2RYF7 251 aa7.14□□□□□ -1.27
COL27A1-204ENST00000477421 C1orf134Q5TEV5 83 aa7.14□□□□□ -1.27
COL27A1-204ENST00000477421 PCOTHQ58A44 107 aa7.13□□□□□ -1.27
COL27A1-204ENST00000477421 OBSCN-AS1Q96MR7 158 aa7.12□□□□□ -1.27
COL27A1-204ENST00000477421 K7EQZ3 153 aa7.11□□□□□ -1.27
COL27A1-204ENST00000477421 MOBPQ13875 183 aa7.11□□□□□ -1.27
COL27A1-204ENST00000477421 ZNF706Q9Y5V0 76 aaPredicted RBP7.11□□□□□ -1.27
COL27A1-204ENST00000477421 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
COL27A1-204ENST00000477421 RETNLBQ9BQ08 111 aa7.1□□□□□ -1.27
COL27A1-204ENST00000477421 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.27
COL27A1-204ENST00000477421 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
COL27A1-204ENST00000477421 A0A1W2PNM2 257 aa7.09□□□□□ -1.28
COL27A1-204ENST00000477421 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
COL27A1-204ENST00000477421 VPS13CQ709C8 3753 aa7.08□□□□□ -1.28
COL27A1-204ENST00000477421 H0Y9P7 68 aa7.08□□□□□ -1.28
COL27A1-204ENST00000477421 IGFL1Q6UW32 110 aa7.08□□□□□ -1.28
COL27A1-204ENST00000477421 PKD1L1Q8TDX9 2849 aa7.07□□□□□ -1.28
COL27A1-204ENST00000477421 RTL8CO15255 209 aa7.07□□□□□ -1.28
COL27A1-204ENST00000477421 PSPHP1O15172 72 aa7.06□□□□□ -1.28
COL27A1-204ENST00000477421 PMAIP1Q13794 54 aa7.06□□□□□ -1.28
COL27A1-204ENST00000477421 TLX1NBP0CAT3 122 aa7.05□□□□□ -1.28
COL27A1-204ENST00000477421 ATP5EP56381 51 aaPredicted RBP7.05□□□□□ -1.28
COL27A1-204ENST00000477421 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
COL27A1-204ENST00000477421 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
COL27A1-204ENST00000477421 C9orf163Q8N9P6 203 aa7.03□□□□□ -1.28
COL27A1-204ENST00000477421 KRTAP26-1Q6PEX3 210 aa7.03□□□□□ -1.28
COL27A1-204ENST00000477421 C1orf64Q8NEQ6 169 aa7.02□□□□□ -1.28
COL27A1-204ENST00000477421 KRTAP1-5Q9BYS1 174 aa7.02□□□□□ -1.28
COL27A1-204ENST00000477421 APLNQ9ULZ1 77 aa7.02□□□□□ -1.28
COL27A1-204ENST00000477421 BCE1O60756 84 aa7.02□□□□□ -1.29
COL27A1-204ENST00000477421 H7BZZ5 65 aa7□□□□□ -1.29
COL27A1-204ENST00000477421 TENM2Q9NT68 2774 aa7□□□□□ -1.29
COL27A1-204ENST00000477421 hDV103S1A0JD37 113 aa7□□□□□ -1.29
COL27A1-204ENST00000477421 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
COL27A1-204ENST00000477421 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
COL27A1-204ENST00000477421 A0A087WTM6 91 aa6.98□□□□□ -1.29
COL27A1-204ENST00000477421 A0A1B0GW54 56 aa6.98□□□□□ -1.29
COL27A1-204ENST00000477421 KLKP1Q107X0 134 aa6.97□□□□□ -1.29
COL27A1-204ENST00000477421 SPACA4Q8TDM5 124 aa6.96□□□□□ -1.3
COL27A1-204ENST00000477421 CNBPP62633 177 aaKnown RBP6.96□□□□□ -1.3
COL27A1-204ENST00000477421 A6NED7 52 aa6.94□□□□□ -1.3
COL27A1-204ENST00000477421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
COL27A1-204ENST00000477421 PSORS1C2Q9UIG4 136 aa6.93□□□□□ -1.3
COL27A1-204ENST00000477421 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
COL27A1-204ENST00000477421 A8MWP4 228 aa6.93□□□□□ -1.3
COL27A1-204ENST00000477421 IGLV5-37A0A075B6J1 123 aa6.92□□□□□ -1.3
COL27A1-204ENST00000477421 TRAV22A0A0B4J277 110 aa6.92□□□□□ -1.3
COL27A1-204ENST00000477421 DSCR10P59022 87 aa6.91□□□□□ -1.3
COL27A1-204ENST00000477421 PRR15Q8IV56 129 aa6.91□□□□□ -1.3
COL27A1-204ENST00000477421 TRRAPQ9Y4A5 3859 aa6.9□□□□□ -1.3
COL27A1-204ENST00000477421 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
COL27A1-204ENST00000477421 IGKV2-30P06310 120 aa6.89□□□□□ -1.31
COL27A1-204ENST00000477421 SPRR1AP35321 89 aa6.89□□□□□ -1.31
COL27A1-204ENST00000477421 ZNF861PO60384 105 aa6.88□□□□□ -1.31
COL27A1-204ENST00000477421 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
COL27A1-204ENST00000477421 SPINK1P00995 79 aa6.88□□□□□ -1.31
COL27A1-204ENST00000477421 TGP01266 2768 aa6.88□□□□□ -1.31
COL27A1-204ENST00000477421 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
COL27A1-204ENST00000477421 SPRR4Q96PI1 79 aa6.86□□□□□ -1.31
COL27A1-204ENST00000477421 PANO1I0J062 215 aa6.85□□□□□ -1.31
COL27A1-204ENST00000477421 C8orf87E5RJ46 101 aa6.85□□□□□ -1.31
COL27A1-204ENST00000477421 SPAG11AQ6PDA7 123 aa6.85□□□□□ -1.31
COL27A1-204ENST00000477421 WWC2-AS2Q96NR7 200 aa6.84□□□□□ -1.31
COL27A1-204ENST00000477421 Q5XG85 94 aa6.84□□□□□ -1.31
COL27A1-204ENST00000477421 Q75L30 129 aa6.84□□□□□ -1.31
COL27A1-204ENST00000477421 SMR3BP02814 79 aaPredicted RBP6.83□□□□□ -1.32
COL27A1-204ENST00000477421 C8orf17Q9NRJ1 99 aa6.83□□□□□ -1.32
COL27A1-204ENST00000477421 TP53AIP1Q9HCN2 124 aa6.82□□□□□ -1.32
COL27A1-204ENST00000477421 RBM12B-AS1Q9P1G2 102 aa6.82□□□□□ -1.32
COL27A1-204ENST00000477421 KRTAP7-1Q8IUC3 87 aa6.81□□□□□ -1.32
COL27A1-204ENST00000477421 MRPL34Q9BQ48 92 aaKnown RBP6.81□□□□□ -1.32
COL27A1-204ENST00000477421 A8MUN3 132 aa6.81□□□□□ -1.32
COL27A1-204ENST00000477421 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
COL27A1-204ENST00000477421 ZNF469Q96JG9 3925 aaPredicted RBP6.8□□□□□ -1.32
COL27A1-204ENST00000477421 LINC00313P59037 77 aa6.8□□□□□ -1.32
COL27A1-204ENST00000477421 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
COL27A1-204ENST00000477421 DMBT1Q9UGM3 2413 aaPredicted RBP6.8□□□□□ -1.32
COL27A1-204ENST00000477421 IGLV7-43P04211 117 aa6.8□□□□□ -1.32
COL27A1-204ENST00000477421 FAM229AH3BQW9 127 aa6.79□□□□□ -1.32
COL27A1-204ENST00000477421 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
COL27A1-204ENST00000477421 KRTAP11-1Q8IUC1 163 aa6.79□□□□□ -1.32
COL27A1-204ENST00000477421 LIMD2Q9BT23 127 aa6.77□□□□□ -1.33
COL27A1-204ENST00000477421 H3BPC8 53 aa6.75□□□□□ -1.33
COL27A1-204ENST00000477421 COA5Q86WW8 74 aa6.75□□□□□ -1.33
COL27A1-204ENST00000477421 Q96NJ1 140 aa6.74□□□□□ -1.33
COL27A1-204ENST00000477421 FAM229BQ4G0N7 80 aa6.73□□□□□ -1.33
COL27A1-204ENST00000477421 SSBP3-AS1Q7Z2R9 100 aa6.72□□□□□ -1.33
COL27A1-204ENST00000477421 IGLV8-61A0A075B6I0 122 aa6.71□□□□□ -1.34
COL27A1-204ENST00000477421 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
COL27A1-204ENST00000477421 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
COL27A1-204ENST00000477421 ACYP2P14621 99 aa6.68□□□□□ -1.34
COL27A1-204ENST00000477421 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
COL27A1-204ENST00000477421 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
COL27A1-204ENST00000477421 LOC101927531A0A1B0GV80 90 aa6.67□□□□□ -1.34
COL27A1-204ENST00000477421 SRRM2Q9UQ35 2752 aaKnown RBP6.67□□□□□ -1.34
COL27A1-204ENST00000477421 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
COL27A1-204ENST00000477421 FLG2Q5D862 2391 aaPredicted RBP6.67□□□□□ -1.34
COL27A1-204ENST00000477421 C9orf92A6NGG3 77 aa6.67□□□□□ -1.34
COL27A1-204ENST00000477421 SPRR1BP22528 89 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms