RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 LINC00322Q6ZN03 302 aaPredicted RBP1.54□□□□□ -2.16
HMGN4-202ENST00000477243 COX7B2Q8TF08 81 aa1.54□□□□□ -2.16
HMGN4-202ENST00000477243 KRTAP1-5Q9BYS1 174 aa1.54□□□□□ -2.16
HMGN4-202ENST00000477243 TTTY12Q9BZ98 90 aa1.54□□□□□ -2.16
HMGN4-202ENST00000477243 WFDC10AQ9H1F0 79 aa1.54□□□□□ -2.16
HMGN4-202ENST00000477243 R4GMQ9 66 aa1.54□□□□□ -2.16
HMGN4-202ENST00000477243 IGKV2-40A0A087WW87 121 aaPredicted RBP1.53□□□□□ -2.16
HMGN4-202ENST00000477243 A0A087WWC5 75 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 TRBV6-5A0A0K0K1A5 114 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 CLPSL1A2RUU4 121 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 UMAD1C9J7I0 102 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 LY6G6CO95867 125 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 IGKV2D-40P01614 121 aaPredicted RBP1.53□□□□□ -2.16
HMGN4-202ENST00000477243 EFNA4P52798 201 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 SPAG11BQ08648 103 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 SPAG11AQ6PDA7 123 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 COA5Q86WW8 74 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 FAM223AQ8IWN6 122 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 BPESC1Q9GZL8 116 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 TMEM14BQ9NUH8 114 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 DNAH6Q9C0G6 4158 aa1.53□□□□□ -2.16
HMGN4-202ENST00000477243 DNAH5Q8TE73 4624 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 LOC110117498A0A087WWA1 95 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 F8WEM9 126 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 M0R2N4 97 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 IGKV1-17P01599 117 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 SMIM13P0DJ93 91 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 PLGLAQ15195 96 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 DEFB110Q30KQ9 67 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 HCP5Q6MZN7 132 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 ZCCHC13Q8WW36 166 aaKnown RBP1.52□□□□□ -2.17
HMGN4-202ENST00000477243 SNURFQ9Y675 71 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 V9GYV3 84 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 STARD9Q9P2P6 4700 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 PKD1P98161 4303 aa1.52□□□□□ -2.17
HMGN4-202ENST00000477243 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
HMGN4-202ENST00000477243 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
HMGN4-202ENST00000477243 CCL18P55774 89 aa1.51□□□□□ -2.17
HMGN4-202ENST00000477243 SFTA2Q6UW10 78 aa1.51□□□□□ -2.17
HMGN4-202ENST00000477243 COX14Q96I36 57 aa1.51□□□□□ -2.17
HMGN4-202ENST00000477243 KRTAP4-12Q9BQ66 201 aa1.51□□□□□ -2.17
HMGN4-202ENST00000477243 ARL2-SNX15V9GYD0 113 aa1.51□□□□□ -2.17
HMGN4-202ENST00000477243 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
HMGN4-202ENST00000477243 MYMXA0A1B0GTQ4 84 aa1.5□□□□□ -2.17
HMGN4-202ENST00000477243 F8VRH5 84 aa1.5□□□□□ -2.17
HMGN4-202ENST00000477243 FXYD3Q14802 87 aa1.5□□□□□ -2.17
HMGN4-202ENST00000477243 ATP5EP2Q5VTU8 51 aa1.5□□□□□ -2.17
HMGN4-202ENST00000477243 LINC00304Q8N9R0 145 aa1.5□□□□□ -2.17
HMGN4-202ENST00000477243 ZNF563Q8TA94 476 aa1.5□□□□□ -2.17
HMGN4-202ENST00000477243 NBDYA0A0U1RRE5 68 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 A0A1B0GWA3 101 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 FAM223BA6NKX1 122 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 CEBPZOSA8MTT3 80 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 IQCF6A8MYZ5 107 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 UQCR11O14957 56 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 MGPP08493 103 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 ARMS2P0C7Q2 107 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 COX17Q14061 63 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 GDF5OSQ5U4N7 250 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 C6orf201Q7Z4U5 140 aa1.49□□□□□ -2.17
HMGN4-202ENST00000477243 ZNF625Q96I27 306 aaPredicted RBP1.49□□□□□ -2.17
HMGN4-202ENST00000477243 A0A1B0GVY2 172 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 IGKV2-29A2NJV5 120 aaPredicted RBP1.48□□□□□ -2.17
HMGN4-202ENST00000477243 C7orf77A4D0Y5 90 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 D6R8Y8 96 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 FXYD1O00168 92 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 LEPROTL1O95214 131 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 BAGE3Q86Y29 109 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 BAGE2Q86Y30 109 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 MUSTN1Q8IVN3 82 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 C5orf56Q8N8D9 126 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 WFDC9Q8NEX5 89 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 LINC01558Q9Y6Z2 57 aa1.48□□□□□ -2.17
HMGN4-202ENST00000477243 TRGV2A0A075B6R0 118 aa1.47□□□□□ -2.17
HMGN4-202ENST00000477243 M0R135 149 aa1.47□□□□□ -2.17
HMGN4-202ENST00000477243 Q6JHZ5 121 aa1.47□□□□□ -2.17
HMGN4-202ENST00000477243 DEFB106AQ8N104 65 aa1.47□□□□□ -2.17
HMGN4-202ENST00000477243 SMIM4Q8WVI0 70 aa1.47□□□□□ -2.17
HMGN4-202ENST00000477243 PRR15LQ9BU68 103 aa1.47□□□□□ -2.17
HMGN4-202ENST00000477243 PSENENQ9NZ42 101 aa1.47□□□□□ -2.17
HMGN4-202ENST00000477243 CTXND1A0A1B0GTU2 59 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 LYNX1G3V0Z9 82 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 LYNX1P0DP58 116 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 CAV3P56539 151 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 FXYD4P59646 89 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 PP632Q6XCG6 107 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 Q6ZQY7 126 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 Q6ZRN7 208 aaPredicted RBP1.46□□□□□ -2.18
HMGN4-202ENST00000477243 WFDC6Q9BQY6 131 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 KRTAP4-7Q9BYR0 210 aa1.46□□□□□ -2.18
HMGN4-202ENST00000477243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.45□□□□□ -2.18
HMGN4-202ENST00000477243 A0A087WTM6 91 aa1.45□□□□□ -2.18
HMGN4-202ENST00000477243 SFTA3P0C7M3 94 aa1.45□□□□□ -2.18
HMGN4-202ENST00000477243 COX8AP10176 69 aa1.45□□□□□ -2.18
HMGN4-202ENST00000477243 GCHFRP30047 84 aa1.45□□□□□ -2.18
HMGN4-202ENST00000477243 SPINT3P49223 89 aa1.45□□□□□ -2.18
HMGN4-202ENST00000477243 LCE1FQ5T754 118 aa1.45□□□□□ -2.18
HMGN4-202ENST00000477243 UBE2D4Q9Y2X8 147 aa1.45□□□□□ -2.18
HMGN4-202ENST00000477243 A0A087WXM4 84 aa1.44□□□□□ -2.18
HMGN4-202ENST00000477243 TRAV1-2A0A0B4J238 106 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms