RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 C8orf17Q9NRJ1 99 aa3.12□□□□□ -1.91
NPHP3-206ENST00000474871 PDZD2O15018 2839 aa3.11□□□□□ -1.91
NPHP3-206ENST00000474871 KRTAP24-1Q3LI83 254 aa3.11□□□□□ -1.91
NPHP3-206ENST00000474871 CSMD3Q7Z407 3707 aa3.11□□□□□ -1.91
NPHP3-206ENST00000474871 KRTAP1-1Q07627 177 aa3.11□□□□□ -1.91
NPHP3-206ENST00000474871 APCP25054 2843 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 LOC110117498A0A087WWA1 95 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 A0A1B0GUV1 79 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 DNAH3Q8TD57 4116 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 ANK3Q12955 4377 aaKnown RBP3.1□□□□□ -1.91
NPHP3-206ENST00000474871 C1orf137Q5JT78 98 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 Q8N9L7 120 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 IGKV2-28A0A075B6P5 120 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 IGKV2D-28P01615 120 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 CENPEQ02224 2701 aa3.1□□□□□ -1.91
NPHP3-206ENST00000474871 A8MWP4 228 aa3.09□□□□□ -1.91
NPHP3-206ENST00000474871 LINC01556Q5JQF7 62 aa3.09□□□□□ -1.91
NPHP3-206ENST00000474871 LINC00308Q8TCZ7 52 aa3.09□□□□□ -1.91
NPHP3-206ENST00000474871 MAST4O15021 2626 aa3.09□□□□□ -1.91
NPHP3-206ENST00000474871 SLPIP03973 132 aa3.09□□□□□ -1.92
NPHP3-206ENST00000474871 RNASE3P12724 160 aaKnown RBP3.09□□□□□ -1.92
NPHP3-206ENST00000474871 ELOF1P60002 83 aaKnown RBP3.09□□□□□ -1.92
NPHP3-206ENST00000474871 POLR2KP53803 58 aaKnown RBP3.09□□□□□ -1.92
NPHP3-206ENST00000474871 NTM-AS1Q6ZSK4 140 aa3.09□□□□□ -1.92
NPHP3-206ENST00000474871 CSNK1G2-AS1Q8NCQ2 148 aa3.09□□□□□ -1.92
NPHP3-206ENST00000474871 MGAM2Q2M2H8 2515 aa3.08□□□□□ -1.92
NPHP3-206ENST00000474871 HELZ2Q9BYK8 2649 aaKnown RBP3.08□□□□□ -1.92
NPHP3-206ENST00000474871 CIRBP-AS1Q8TBR5 109 aa3.08□□□□□ -1.92
NPHP3-206ENST00000474871 FLG2Q5D862 2391 aaPredicted RBP3.08□□□□□ -1.92
NPHP3-206ENST00000474871 A0A1B0GW54 56 aa3.08□□□□□ -1.92
NPHP3-206ENST00000474871 Q6ZQY7 126 aa3.08□□□□□ -1.92
NPHP3-206ENST00000474871 PRR9Q5T870 116 aa3.08□□□□□ -1.92
NPHP3-206ENST00000474871 DNAH6Q9C0G6 4158 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 MXRA5Q9NR99 2828 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 ZANQ9Y493 2812 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 CHD6Q8TD26 2715 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 ZNF861PO60384 105 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 A0A087WSZ3 146 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 COX6A2Q02221 97 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 SMIM29Q86T20 159 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 C9orf163Q8N9P6 203 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 SPRR4Q96PI1 79 aa3.07□□□□□ -1.92
NPHP3-206ENST00000474871 NBDYA0A0U1RRE5 68 aa3.06□□□□□ -1.92
NPHP3-206ENST00000474871 MAP1AP78559 2803 aaPredicted RBP3.06□□□□□ -1.92
NPHP3-206ENST00000474871 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
NPHP3-206ENST00000474871 LINC00315P59091 139 aa3.06□□□□□ -1.92
NPHP3-206ENST00000474871 CASC10Q5T4H9 136 aa3.05□□□□□ -1.92
NPHP3-206ENST00000474871 UNQ6190/PRO20217Q6UXQ8 127 aa3.05□□□□□ -1.92
NPHP3-206ENST00000474871 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
NPHP3-206ENST00000474871 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
NPHP3-206ENST00000474871 ITPR3Q14573 2671 aa3.05□□□□□ -1.92
NPHP3-206ENST00000474871 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
NPHP3-206ENST00000474871 WFDC10BQ8IUB3 73 aa3.05□□□□□ -1.92
NPHP3-206ENST00000474871 SPANXA2-OT1Q8N9U9 137 aa3.05□□□□□ -1.92
NPHP3-206ENST00000474871 GCN1Q92616 2671 aaKnown RBP3.04□□□□□ -1.92
NPHP3-206ENST00000474871 TEX15Q9BXT5 2789 aa3.04□□□□□ -1.92
NPHP3-206ENST00000474871 C15orf56Q8N910 161 aa3.04□□□□□ -1.92
NPHP3-206ENST00000474871 ST20-AS1Q8NBB2 130 aa3.04□□□□□ -1.92
NPHP3-206ENST00000474871 HECTD1Q9ULT8 2610 aa3.04□□□□□ -1.92
NPHP3-206ENST00000474871 LINC00472Q9H8W2 130 aa3.04□□□□□ -1.92
NPHP3-206ENST00000474871 ATRQ13535 2644 aa3.03□□□□□ -1.92
NPHP3-206ENST00000474871 DNAH10OSP0CZ25 163 aa3.03□□□□□ -1.93
NPHP3-206ENST00000474871 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.93
NPHP3-206ENST00000474871 WFDC13Q8IUB5 93 aa3.02□□□□□ -1.93
NPHP3-206ENST00000474871 A8MTW9 85 aa3.02□□□□□ -1.93
NPHP3-206ENST00000474871 SMIM11BQ8TCY0 68 aa3.02□□□□□ -1.93
NPHP3-206ENST00000474871 A8MUU9 505 aa3.02□□□□□ -1.93
NPHP3-206ENST00000474871 STAB1Q9NY15 2570 aa3.02□□□□□ -1.93
NPHP3-206ENST00000474871 SMIM1B2RUZ4 78 aa3.01□□□□□ -1.93
NPHP3-206ENST00000474871 TYMSOSQ8TAI1 123 aa3.01□□□□□ -1.93
NPHP3-206ENST00000474871 UNC79Q9P2D8 2635 aa3.01□□□□□ -1.93
NPHP3-206ENST00000474871 RPL37AP61513 92 aaKnown RBP3.01□□□□□ -1.93
NPHP3-206ENST00000474871 IGLV1-50A0A075B6I6 118 aa3.01□□□□□ -1.93
NPHP3-206ENST00000474871 KRTAP10-3P60369 221 aa3.01□□□□□ -1.93
NPHP3-206ENST00000474871 A0A087WTM6 91 aa3.01□□□□□ -1.93
NPHP3-206ENST00000474871 FLNAP21333 2647 aaKnown RBP3□□□□□ -1.93
NPHP3-206ENST00000474871 IGLV5-39A0A0G2JS06 123 aa3□□□□□ -1.93
NPHP3-206ENST00000474871 LINC00208Q96KT6 92 aa3□□□□□ -1.93
NPHP3-206ENST00000474871 IGLV7-46A0A075B6I9 117 aa3□□□□□ -1.93
NPHP3-206ENST00000474871 KCNQ1DNQ9H478 68 aa3□□□□□ -1.93
NPHP3-206ENST00000474871 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
NPHP3-206ENST00000474871 Q8NBF4 154 aa2.99□□□□□ -1.93
NPHP3-206ENST00000474871 TRRAPQ9Y4A5 3859 aa2.99□□□□□ -1.93
NPHP3-206ENST00000474871 ITPR2Q14571 2701 aa2.99□□□□□ -1.93
NPHP3-206ENST00000474871 PANO1I0J062 215 aa2.99□□□□□ -1.93
NPHP3-206ENST00000474871 SPACA4Q8TDM5 124 aa2.99□□□□□ -1.93
NPHP3-206ENST00000474871 Q6ZSN1 163 aa2.98□□□□□ -1.93
NPHP3-206ENST00000474871 TP53AIP1Q9HCN2 124 aa2.98□□□□□ -1.93
NPHP3-206ENST00000474871 SETXQ7Z333 2677 aaKnown RBP2.98□□□□□ -1.93
NPHP3-206ENST00000474871 IGLV5-37A0A075B6J1 123 aa2.98□□□□□ -1.93
NPHP3-206ENST00000474871 K7EIL1 84 aa2.98□□□□□ -1.93
NPHP3-206ENST00000474871 A0A1B0GVX0 72 aa2.97□□□□□ -1.93
NPHP3-206ENST00000474871 CMYA5Q8N3K9 4069 aa2.97□□□□□ -1.93
NPHP3-206ENST00000474871 COA5Q86WW8 74 aa2.97□□□□□ -1.93
NPHP3-206ENST00000474871 PRLHP81277 87 aa2.97□□□□□ -1.93
NPHP3-206ENST00000474871 FBN1P35555 2871 aaKnown RBP2.96□□□□□ -1.93
NPHP3-206ENST00000474871 IGLV8-61A0A075B6I0 122 aa2.96□□□□□ -1.94
NPHP3-206ENST00000474871 GVQW2A0A096LPI5 108 aaPredicted RBP2.96□□□□□ -1.94
NPHP3-206ENST00000474871 TLX1NBP0CAT3 122 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms