RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 NBPF19A0A087WUL8 3843 aa4.62□□□□□ -1.67
GAPVD1-215ENST00000470056 C15orf56Q8N910 161 aa4.61□□□□□ -1.67
GAPVD1-215ENST00000470056 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
GAPVD1-215ENST00000470056 C22orf24Q9Y442 160 aa4.61□□□□□ -1.67
GAPVD1-215ENST00000470056 VPS13CQ709C8 3753 aa4.61□□□□□ -1.67
GAPVD1-215ENST00000470056 COA5Q86WW8 74 aa4.61□□□□□ -1.67
GAPVD1-215ENST00000470056 MDFIQ99750 246 aa4.61□□□□□ -1.67
GAPVD1-215ENST00000470056 AKAP9Q99996 3911 aa4.61□□□□□ -1.67
GAPVD1-215ENST00000470056 LINC00476Q8WZB0 136 aa4.6□□□□□ -1.67
GAPVD1-215ENST00000470056 TLX1NBP0CAT3 122 aa4.6□□□□□ -1.67
GAPVD1-215ENST00000470056 NIPBLQ6KC79 2804 aaeCLIP4.6□□□□□ -1.675e-8■□□□□ 8.6
GAPVD1-215ENST00000470056 KRTAP26-1Q6PEX3 210 aa4.59□□□□□ -1.67
GAPVD1-215ENST00000470056 A8MUN3 132 aa4.59□□□□□ -1.68
GAPVD1-215ENST00000470056 PLA2G2DQ9UNK4 145 aa4.58□□□□□ -1.68
GAPVD1-215ENST00000470056 COL6A5A8TX70 2615 aa4.58□□□□□ -1.68
GAPVD1-215ENST00000470056 APLNQ9ULZ1 77 aa4.58□□□□□ -1.68
GAPVD1-215ENST00000470056 STAB1Q9NY15 2570 aa4.58□□□□□ -1.68
GAPVD1-215ENST00000470056 C16orf90A8MZG2 172 aa4.56□□□□□ -1.68
GAPVD1-215ENST00000470056 TENM1Q9UKZ4 2725 aa4.56□□□□□ -1.68
GAPVD1-215ENST00000470056 PRLHP81277 87 aa4.56□□□□□ -1.68
GAPVD1-215ENST00000470056 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
GAPVD1-215ENST00000470056 LY6G6CO95867 125 aa4.55□□□□□ -1.68
GAPVD1-215ENST00000470056 NBDYA0A0U1RRE5 68 aa4.55□□□□□ -1.68
GAPVD1-215ENST00000470056 K7EQZ3 153 aa4.55□□□□□ -1.68
GAPVD1-215ENST00000470056 OCR1Q9BZK8 76 aa4.55□□□□□ -1.68
GAPVD1-215ENST00000470056 IGLV5-37A0A075B6J1 123 aa4.54□□□□□ -1.68
GAPVD1-215ENST00000470056 ZNF469Q96JG9 3925 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-215ENST00000470056 MGAM2Q2M2H8 2515 aa4.54□□□□□ -1.68
GAPVD1-215ENST00000470056 CNBPP62633 177 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-215ENST00000470056 MRPL34Q9BQ48 92 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-215ENST00000470056 Q75L30 129 aa4.54□□□□□ -1.68
GAPVD1-215ENST00000470056 PLA2G1BP04054 148 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-215ENST00000470056 CIRBP-AS1Q8TBR5 109 aa4.53□□□□□ -1.68
GAPVD1-215ENST00000470056 NBEAL2Q6ZNJ1 2754 aa4.53□□□□□ -1.68
GAPVD1-215ENST00000470056 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
GAPVD1-215ENST00000470056 C9orf129Q5T035 196 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-215ENST00000470056 IGLV1-50A0A075B6I6 118 aa4.52□□□□□ -1.69
GAPVD1-215ENST00000470056 ASB16-AS1Q495Z4 193 aa4.52□□□□□ -1.69
GAPVD1-215ENST00000470056 EPM2AB3EWF7 344 aa4.51□□□□□ -1.69
GAPVD1-215ENST00000470056 NOTCH1P46531 2555 aa4.51□□□□□ -1.69
GAPVD1-215ENST00000470056 DEFB116Q30KQ4 102 aa4.51□□□□□ -1.69
GAPVD1-215ENST00000470056 Q5XG85 94 aa4.51□□□□□ -1.69
GAPVD1-215ENST00000470056 VWFP04275 2813 aa4.51□□□□□ -1.69
GAPVD1-215ENST00000470056 IGKV2D-30A0A075B6S6 120 aa4.5□□□□□ -1.69
GAPVD1-215ENST00000470056 IGKV2-30P06310 120 aa4.5□□□□□ -1.69
GAPVD1-215ENST00000470056 KRTAP21-3Q3LHN1 58 aa4.5□□□□□ -1.69
GAPVD1-215ENST00000470056 IGLV5-52A0A0A0MRZ9 124 aa4.5□□□□□ -1.69
GAPVD1-215ENST00000470056 A0A1B0GVX0 72 aa4.49□□□□□ -1.69
GAPVD1-215ENST00000470056 SPRR4Q96PI1 79 aa4.49□□□□□ -1.69
GAPVD1-215ENST00000470056 LINC00313P59037 77 aa4.49□□□□□ -1.69
GAPVD1-215ENST00000470056 Q8NDZ9 215 aa4.49□□□□□ -1.69
GAPVD1-215ENST00000470056 C8orf17Q9NRJ1 99 aa4.49□□□□□ -1.69
GAPVD1-215ENST00000470056 SPINK1P00995 79 aa4.49□□□□□ -1.69
GAPVD1-215ENST00000470056 CASC10Q5T4H9 136 aa4.49□□□□□ -1.69
GAPVD1-215ENST00000470056 IGFL1Q6UW32 110 aa4.48□□□□□ -1.69
GAPVD1-215ENST00000470056 ST20-AS1Q8NBB2 130 aa4.48□□□□□ -1.69
GAPVD1-215ENST00000470056 Q8N377 158 aa4.47□□□□□ -1.69
GAPVD1-215ENST00000470056 C9orf163Q8N9P6 203 aa4.47□□□□□ -1.69
GAPVD1-215ENST00000470056 SSBP3-AS1Q7Z2R9 100 aa4.47□□□□□ -1.69
GAPVD1-215ENST00000470056 IGLV7-46A0A075B6I9 117 aa4.47□□□□□ -1.69
GAPVD1-215ENST00000470056 C1orf134Q5TEV5 83 aa4.47□□□□□ -1.69
GAPVD1-215ENST00000470056 M0R2N4 97 aa4.46□□□□□ -1.7
GAPVD1-215ENST00000470056 WWC2-AS2Q96NR7 200 aa4.46□□□□□ -1.7
GAPVD1-215ENST00000470056 KRTAP1-5Q9BYS1 174 aa4.45□□□□□ -1.7
GAPVD1-215ENST00000470056 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
GAPVD1-215ENST00000470056 RBM12B-AS1Q9P1G2 102 aa4.45□□□□□ -1.7
GAPVD1-215ENST00000470056 SPRR1AP35321 89 aa4.45□□□□□ -1.7
GAPVD1-215ENST00000470056 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
GAPVD1-215ENST00000470056 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
GAPVD1-215ENST00000470056 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
GAPVD1-215ENST00000470056 SPINT4Q6UDR6 99 aa4.44□□□□□ -1.7
GAPVD1-215ENST00000470056 FP248Q71RG6 208 aaPredicted RBP4.44□□□□□ -1.7
GAPVD1-215ENST00000470056 A0A1W2PNM2 257 aa4.43□□□□□ -1.7
GAPVD1-215ENST00000470056 A0A087WTM6 91 aa4.43□□□□□ -1.7
GAPVD1-215ENST00000470056 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
GAPVD1-215ENST00000470056 FBN1P35555 2871 aaKnown RBP4.42□□□□□ -1.7
GAPVD1-215ENST00000470056 RTL8CO15255 209 aa4.41□□□□□ -1.7
GAPVD1-215ENST00000470056 NBEAL1Q6ZS30 2694 aa4.41□□□□□ -1.7
GAPVD1-215ENST00000470056 J3QL48 77 aa4.41□□□□□ -1.7
GAPVD1-215ENST00000470056 TENM3Q9P273 2699 aa4.4□□□□□ -1.71
GAPVD1-215ENST00000470056 KRTAP4-16G5E9R7 235 aaPredicted RBP4.4□□□□□ -1.71
GAPVD1-215ENST00000470056 Q6ZRN7 208 aaPredicted RBP4.39□□□□□ -1.71
GAPVD1-215ENST00000470056 Q6ZR54 194 aa4.39□□□□□ -1.71
GAPVD1-215ENST00000470056 A0A1W2PNN7 141 aa4.39□□□□□ -1.71
GAPVD1-215ENST00000470056 PHF5AQ7RTV0 110 aaKnown RBP4.39□□□□□ -1.71
GAPVD1-215ENST00000470056 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
GAPVD1-215ENST00000470056 DSCR10P59022 87 aa4.39□□□□□ -1.71
GAPVD1-215ENST00000470056 IGLV8-61A0A075B6I0 122 aa4.38□□□□□ -1.71
GAPVD1-215ENST00000470056 CUBNO60494 3623 aa4.38□□□□□ -1.71
GAPVD1-215ENST00000470056 A0A087X002 238 aa4.38□□□□□ -1.71
GAPVD1-215ENST00000470056 CHTF8P0CG12 524 aa4.38□□□□□ -1.71
GAPVD1-215ENST00000470056 ZNF861PO60384 105 aa4.37□□□□□ -1.71
GAPVD1-215ENST00000470056 DMAC1Q96GE9 116 aa4.37□□□□□ -1.71
GAPVD1-215ENST00000470056 SPACA4Q8TDM5 124 aa4.37□□□□□ -1.71
GAPVD1-215ENST00000470056 TRRAPQ9Y4A5 3859 aa4.36□□□□□ -1.71
GAPVD1-215ENST00000470056 Q5VV11 94 aa4.36□□□□□ -1.71
GAPVD1-215ENST00000470056 FLG2Q5D862 2391 aaPredicted RBP4.35□□□□□ -1.71
GAPVD1-215ENST00000470056 KRTAP7-1Q8IUC3 87 aa4.35□□□□□ -1.71
GAPVD1-215ENST00000470056 SPRR1BP22528 89 aa4.35□□□□□ -1.71
GAPVD1-215ENST00000470056 PLAC8Q9NZF1 115 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms