RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 PLA2G10O15496 165 aa1.78□□□□□ -2.12
ECHDC1-211ENST00000460558 AKR1D1P51857 326 aa1.78□□□□□ -2.12
ECHDC1-211ENST00000460558 RPL7L1Q6DKI1 246 aaKnown RBP1.78□□□□□ -2.12
ECHDC1-211ENST00000460558 C8orf87E5RJ46 101 aa1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 NCR3O14931 201 aa1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 SPRR1BP22528 89 aa1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 CKS2P33552 79 aa1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 MRPL51Q4U2R6 128 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 SPINT4Q6UDR6 99 aa1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 BOD1L2Q8IYS8 172 aa1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 MANBALQ9NQG1 85 aa1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 CYSLTR1Q9Y271 337 aa1.77□□□□□ -2.13
ECHDC1-211ENST00000460558 HIGD1CA8MV81 97 aa1.76□□□□□ -2.13
ECHDC1-211ENST00000460558 SPINK8P0C7L1 97 aa1.76□□□□□ -2.13
ECHDC1-211ENST00000460558 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
ECHDC1-211ENST00000460558 MBD3L1Q8WWY6 194 aa1.76□□□□□ -2.13
ECHDC1-211ENST00000460558 TINCRA0A1B0GVN0 87 aa1.75□□□□□ -2.13
ECHDC1-211ENST00000460558 SSNA1O43805 119 aa1.75□□□□□ -2.13
ECHDC1-211ENST00000460558 PDE6DO43924 150 aa1.75□□□□□ -2.13
ECHDC1-211ENST00000460558 LINC00158P58513 81 aa1.75□□□□□ -2.13
ECHDC1-211ENST00000460558 SFTA2Q6UW10 78 aa1.75□□□□□ -2.13
ECHDC1-211ENST00000460558 FAM213BQ8TBF2 198 aa1.75□□□□□ -2.13
ECHDC1-211ENST00000460558 GNG13Q9P2W3 67 aa1.75□□□□□ -2.13
ECHDC1-211ENST00000460558 IGIPA6NJ69 53 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 HMSDA8MTL9 139 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 D6R8Y8 96 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 H3BRM9 83 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 NPYP01303 97 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 SCGB1C2P0DMR2 95 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 DDTP30046 118 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 NDUFA6P56556 154 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 PRO0461Q9UI25 63 aa1.74□□□□□ -2.13
ECHDC1-211ENST00000460558 UMAD1C9J7I0 102 aa1.73□□□□□ -2.13
ECHDC1-211ENST00000460558 PPBPP02775 128 aa1.73□□□□□ -2.13
ECHDC1-211ENST00000460558 TMEM136Q6ZRR5 245 aa1.73□□□□□ -2.13
ECHDC1-211ENST00000460558 ANAPC13Q9BS18 74 aa1.73□□□□□ -2.13
ECHDC1-211ENST00000460558 A0A1W2PNM2 257 aa1.72□□□□□ -2.13
ECHDC1-211ENST00000460558 MT4P47944 62 aa1.72□□□□□ -2.13
ECHDC1-211ENST00000460558 HINT1P49773 126 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-211ENST00000460558 SPRR2GQ9BYE4 73 aa1.72□□□□□ -2.13
ECHDC1-211ENST00000460558 TRAV23DV6A0A075B6W5 121 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 TRBV10-2A0A0K0K1G8 114 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 FAM236AA0A1B0GUQ0 79 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 FAM236BA0A1B0GV22 79 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 H3BQ85 93 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 ZNF73O43830 326 aaPredicted RBP1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 G0S2P27469 103 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 MP68P56378 58 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 S100A7L2Q5SY68 101 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 LINC00299Q6ZSB3 139 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
ECHDC1-211ENST00000460558 TEX49A0A1B0GTD5 131 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 F8W036 122 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 K7EMI3 77 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 C4orf26Q17RF5 130 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 Q5BKY6 102 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 ADM2Q7Z4H4 148 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 C1orf64Q8NEQ6 169 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 DEFB105AQ8NG35 78 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 PRELID3AQ96N28 172 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 MAP1LC3AQ9H492 121 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 NAT8BQ9UHF3 227 aa1.7□□□□□ -2.14
ECHDC1-211ENST00000460558 K7ERS5 55 aa1.69□□□□□ -2.14
ECHDC1-211ENST00000460558 S100A8P05109 93 aa1.69□□□□□ -2.14
ECHDC1-211ENST00000460558 ZNF345Q14585 488 aa1.69□□□□□ -2.14
ECHDC1-211ENST00000460558 Q8N8P6 123 aa1.69□□□□□ -2.14
ECHDC1-211ENST00000460558 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
ECHDC1-211ENST00000460558 CST9LQ9H4G1 147 aa1.69□□□□□ -2.14
ECHDC1-211ENST00000460558 PRO2289Q9P1D8 64 aa1.69□□□□□ -2.14
ECHDC1-211ENST00000460558 TRAPPC1Q9Y5R8 145 aa1.69□□□□□ -2.14
ECHDC1-211ENST00000460558 TRBV7-7A0A0K0K1E9 115 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 LST1O00453 97 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 SMIM13P0DJ93 91 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 MEIG1Q5JSS6 88 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 TOMM6Q96B49 74 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 SCGB3A1Q96QR1 104 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 OSTCQ9NRP0 149 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 SPANXB1Q9NS25 103 aaPredicted RBP1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 LAMTOR2Q9Y2Q5 125 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 R4GN34 69 aa1.68□□□□□ -2.14
ECHDC1-211ENST00000460558 LINC00587B1AMM8 73 aa1.67□□□□□ -2.14
ECHDC1-211ENST00000460558 ZNF22P17026 224 aaPredicted RBP1.67□□□□□ -2.14
ECHDC1-211ENST00000460558 WFDC13Q8IUB5 93 aa1.67□□□□□ -2.14
ECHDC1-211ENST00000460558 ZCCHC13Q8WW36 166 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-211ENST00000460558 NXT2Q9NPJ8 142 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-211ENST00000460558 V9GYV3 84 aa1.67□□□□□ -2.14
ECHDC1-211ENST00000460558 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-211ENST00000460558 F8WEM9 126 aa1.66□□□□□ -2.14
ECHDC1-211ENST00000460558 IGLC3P0DOY3 106 aa1.66□□□□□ -2.14
ECHDC1-211ENST00000460558 SPINK7P58062 85 aa1.66□□□□□ -2.14
ECHDC1-211ENST00000460558 RBM3P98179 157 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-211ENST00000460558 COMMD7Q86VX2 200 aa1.66□□□□□ -2.14
ECHDC1-211ENST00000460558 A0A1B0GU33 70 aa1.65□□□□□ -2.15
ECHDC1-211ENST00000460558 LINC01549A6NIU2 74 aa1.65□□□□□ -2.15
ECHDC1-211ENST00000460558 ZNF815PA8K554 130 aa1.65□□□□□ -2.15
ECHDC1-211ENST00000460558 ARPC5O15511 151 aa1.65□□□□□ -2.15
ECHDC1-211ENST00000460558 ADCYAP1P18509 176 aa1.65□□□□□ -2.15
ECHDC1-211ENST00000460558 KRTAP25-1Q3LHN0 102 aa1.65□□□□□ -2.15
ECHDC1-211ENST00000460558 H1FX-AS1Q4G0G2 97 aa1.65□□□□□ -2.15
ECHDC1-211ENST00000460558 MRPL54Q6P161 138 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 241.5 ms