RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 XAF1Q6GPH4 301 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 LYPD5Q6UWN5 251 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.87□□□□□ -2.27
RFC4-211ENST00000460408 PATE2Q6UY27 113 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 DPPA3Q6W0C5 159 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 MIR17HGQ75NE6 70 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 VSTM2AQ8TAG5 236 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 ZNF431Q8TF32 576 aaPredicted RBP0.87□□□□□ -2.27
RFC4-211ENST00000460408 GINS4Q9BRT9 223 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 NAA60Q9H7X0 242 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 NOP10Q9NPE3 64 aaKnown RBP0.87□□□□□ -2.27
RFC4-211ENST00000460408 UQCR10Q9UDW1 63 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 TPRKBQ9Y3C4 175 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 SERP1Q9Y6X1 66 aa0.87□□□□□ -2.27
RFC4-211ENST00000460408 A8MTW9 85 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 NUPR1O60356 82 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 CST7O76096 145 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 SIX6O95475 246 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 TRACP01848 142 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 HBDP02042 147 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 SLC25A4P12235 298 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 TPT1P13693 172 aaKnown RBP0.86□□□□□ -2.27
RFC4-211ENST00000460408 HTN1P15515 57 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 COX7CP15954 63 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 SPRR2DP22532 72 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 SNCAP37840 140 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 EIF5AP63241 154 aaKnown RBP0.86□□□□□ -2.27
RFC4-211ENST00000460408 PRCDQ00LT1 54 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 SPINK13Q1W4C9 94 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 BVES-AS1Q5T3Y7 98 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 EIF5AL1Q6IS14 154 aaKnown RBP0.86□□□□□ -2.27
RFC4-211ENST00000460408 ARHGAP5-AS1Q96IT6 56 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 PRELID3AQ96N28 172 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 NDUFA4L2Q9NRX3 87 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 PLAC8Q9NZF1 115 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 MRPL36Q9P0J6 103 aaKnown RBP0.86□□□□□ -2.27
RFC4-211ENST00000460408 EPDR1Q9UM22 224 aa0.86□□□□□ -2.27
RFC4-211ENST00000460408 FLGP20930 4061 aaPredicted RBP0.86□□□□□ -2.27
RFC4-211ENST00000460408 TRBV7-7A0A0K0K1E9 115 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 hADV29S1A0JD25 119 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 F8W1H4 67 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 H3BRM9 83 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 IGHV3-30P01768 117 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 IGHV3-33P01772 117 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 IGHV3-30-5P0DP03 117 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 LSM3P62310 102 aaKnown RBP0.85□□□□□ -2.27
RFC4-211ENST00000460408 UBE2BP63146 152 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 SPINK9Q5DT21 86 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 NMSQ5H8A3 153 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 LINC01545Q5VT33 79 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 SOSTDC1Q6X4U4 206 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 Q8N8P6 123 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 TMEM263Q8WUH6 116 aaKnown RBP0.85□□□□□ -2.27
RFC4-211ENST00000460408 S100A16Q96FQ6 103 aaKnown RBP0.85□□□□□ -2.27
RFC4-211ENST00000460408 AQP10Q96PS8 301 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 SPANXDQ9BXN6 97 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 ST20Q9HBF5 79 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 SLC39A9Q9NUM3 307 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 LINC00474Q9P2X8 69 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 CACFD1Q9UGQ2 172 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 NDUFA12Q9UI09 145 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 PRO0255Q9UI72 69 aa0.85□□□□□ -2.27
RFC4-211ENST00000460408 TRGV1A0A0A0MS02 117 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 A0A1W2PPM0 123 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 C7orf77A4D0Y5 90 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 TIMM17BO60830 172 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 IGKCP01834 107 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 FAUP35544 74 aaKnown RBP0.84□□□□□ -2.27
RFC4-211ENST00000460408 NPC2P61916 151 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 SEC11AP67812 179 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 ETDBQ3ZM63 59 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 SPATA45Q537H7 98 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 OR10AG1Q8NH19 301 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 C18orf32Q8TCD1 76 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 ODF3Q96PU9 254 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 SLC50A1Q9BRV3 221 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 NPCDR1Q9BY65 106 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 UBE2D4Q9Y2X8 147 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 SPCS1Q9Y6A9 102 aa0.84□□□□□ -2.27
RFC4-211ENST00000460408 TRAV12-3A0A0B4J271 114 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 NAP1L6A6NFF2 107 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 SYS1-DBNDD2H3BUS1 97 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 H3BUT2 72 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 LYRM1O43325 122 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 SSSCA1O60232 199 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 SPINK4O60575 86 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 SNCGO76070 127 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 CCKP06307 115 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 SFTA3P0C7M3 94 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 FXYD4P59646 89 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 MRPS36P82909 103 aaKnown RBP0.83□□□□□ -2.28
RFC4-211ENST00000460408 ADIRFQ15847 76 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 KRTAP19-2Q3LHN2 52 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 C1orf137Q5JT78 98 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 ZNF818PQ6ZRF7 136 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 C5orf38Q86SI9 138 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 FAM19A2Q8N3H0 131 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 TOMM5Q8N4H5 51 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms