RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 USH2AO75445 5202 aa3.91□□□□□ -1.78
HDLBP-222ENST00000449504 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.78
HDLBP-222ENST00000449504 K7ERJ3 54 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 SLC25A20O43772 301 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 COX7CP15954 63 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 PSMB2P49721 201 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 HERVK_113P63121 156 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 PAPPA-AS1Q5QFB9 102 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 Q8N377 158 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 ANKRD29Q8N6D5 301 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 NRACQ8N912 160 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 SPRR4Q96PI1 79 aa3.9□□□□□ -1.79
HDLBP-222ENST00000449504 ATOX1O00244 68 aa3.89□□□□□ -1.79
HDLBP-222ENST00000449504 PPP1R17O96001 155 aa3.89□□□□□ -1.79
HDLBP-222ENST00000449504 IFI27P40305 119 aaPredicted RBP3.89□□□□□ -1.79
HDLBP-222ENST00000449504 ATXN8Q156A1 80 aa3.89□□□□□ -1.79
HDLBP-222ENST00000449504 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
HDLBP-222ENST00000449504 GAGE2AQ6NT46 116 aa3.89□□□□□ -1.79
HDLBP-222ENST00000449504 LOC107984156A0A0G2JMH3 177 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 F8VRH5 84 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 TCL1BO95988 128 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 LINC00643Q86TS7 51 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 ARL17AQ8IVW1 177 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 Q8IZM0 81 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 LINC01561Q8N1V8 128 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 COPS9Q8WXC6 57 aa3.88□□□□□ -1.79
HDLBP-222ENST00000449504 IGLV5-37A0A075B6J1 123 aa3.87□□□□□ -1.79
HDLBP-222ENST00000449504 A0A0B4J2C4 111 aa3.87□□□□□ -1.79
HDLBP-222ENST00000449504 TRACP01848 142 aa3.87□□□□□ -1.79
HDLBP-222ENST00000449504 CFC1P0CG37 223 aa3.87□□□□□ -1.79
HDLBP-222ENST00000449504 Q8N8P6 123 aa3.87□□□□□ -1.79
HDLBP-222ENST00000449504 PRO1854Q9UHT4 67 aa3.87□□□□□ -1.79
HDLBP-222ENST00000449504 IGLV4-3A0A075B6K6 122 aa3.86□□□□□ -1.79
HDLBP-222ENST00000449504 D6R8Y8 96 aa3.86□□□□□ -1.79
HDLBP-222ENST00000449504 M0R378 163 aa3.86□□□□□ -1.79
HDLBP-222ENST00000449504 CKS2P33552 79 aa3.86□□□□□ -1.79
HDLBP-222ENST00000449504 HERVK_113P61574 105 aa3.86□□□□□ -1.79
HDLBP-222ENST00000449504 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
HDLBP-222ENST00000449504 ZNF706Q9Y5V0 76 aaPredicted RBP3.86□□□□□ -1.79
HDLBP-222ENST00000449504 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
HDLBP-222ENST00000449504 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
HDLBP-222ENST00000449504 COX6CP09669 75 aa3.85□□□□□ -1.79
HDLBP-222ENST00000449504 MOBPQ13875 183 aa3.85□□□□□ -1.79
HDLBP-222ENST00000449504 TMEM141Q96I45 108 aa3.85□□□□□ -1.79
HDLBP-222ENST00000449504 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
HDLBP-222ENST00000449504 NDUFC2O95298 119 aa3.84□□□□□ -1.79
HDLBP-222ENST00000449504 SEC61GP60059 68 aa3.84□□□□□ -1.79
HDLBP-222ENST00000449504 HIST1H4AP62805 103 aaKnown RBP3.84□□□□□ -1.79
HDLBP-222ENST00000449504 ORMDL2Q53FV1 153 aa3.84□□□□□ -1.79
HDLBP-222ENST00000449504 SMIM2Q9BVW6 85 aa3.84□□□□□ -1.79
HDLBP-222ENST00000449504 V9GYY9 64 aa3.84□□□□□ -1.79
HDLBP-222ENST00000449504 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.8
HDLBP-222ENST00000449504 FAM236AA0A1B0GUQ0 79 aa3.83□□□□□ -1.8
HDLBP-222ENST00000449504 FAM236BA0A1B0GV22 79 aa3.83□□□□□ -1.8
HDLBP-222ENST00000449504 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
HDLBP-222ENST00000449504 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
HDLBP-222ENST00000449504 SCGB1D4Q6XE38 83 aa3.83□□□□□ -1.8
HDLBP-222ENST00000449504 CDKN2A-AS1Q9UH64 79 aa3.83□□□□□ -1.8
HDLBP-222ENST00000449504 LAMTOR3Q9UHA4 124 aa3.83□□□□□ -1.8
HDLBP-222ENST00000449504 PYGO1Q9Y3Y4 419 aa3.83□□□□□ -1.8
HDLBP-222ENST00000449504 LOC389332A0A1B0GUA5 103 aa3.82□□□□□ -1.8
HDLBP-222ENST00000449504 ZNF815PA8K554 130 aa3.82□□□□□ -1.8
HDLBP-222ENST00000449504 SERP2Q8N6R1 65 aa3.82□□□□□ -1.8
HDLBP-222ENST00000449504 SMCR5Q8TEV8 140 aa3.82□□□□□ -1.8
HDLBP-222ENST00000449504 TIMM17AQ99595 171 aa3.82□□□□□ -1.8
HDLBP-222ENST00000449504 VPREB1P12018 145 aa3.81□□□□□ -1.8
HDLBP-222ENST00000449504 PFN2P35080 140 aa3.81□□□□□ -1.8
HDLBP-222ENST00000449504 Q5XG85 94 aa3.81□□□□□ -1.8
HDLBP-222ENST00000449504 SSBP3-AS1Q7Z2R9 100 aa3.81□□□□□ -1.8
HDLBP-222ENST00000449504 COX7B2Q8TF08 81 aa3.81□□□□□ -1.8
HDLBP-222ENST00000449504 C11orf86A6NJI1 115 aa3.8□□□□□ -1.8
HDLBP-222ENST00000449504 IGLV6-57P01721 117 aa3.8□□□□□ -1.8
HDLBP-222ENST00000449504 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
HDLBP-222ENST00000449504 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
HDLBP-222ENST00000449504 TOMM6Q96B49 74 aa3.8□□□□□ -1.8
HDLBP-222ENST00000449504 AMELXQ99217 191 aa3.8□□□□□ -1.8
HDLBP-222ENST00000449504 TTTY13Q9BZ97 58 aa3.8□□□□□ -1.8
HDLBP-222ENST00000449504 SERP1Q9Y6X1 66 aa3.8□□□□□ -1.8
HDLBP-222ENST00000449504 ATP5EP56381 51 aaPredicted RBP3.79□□□□□ -1.8
HDLBP-222ENST00000449504 NPC2P61916 151 aa3.79□□□□□ -1.8
HDLBP-222ENST00000449504 LINC00846Q9NV44 126 aa3.79□□□□□ -1.8
HDLBP-222ENST00000449504 SMIM26A0A096LP01 95 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 TEX49A0A1B0GTD5 131 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 J3QQQ9 107 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 LST1O00453 97 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 LINC00483Q53H64 154 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 Q8NDZ9 215 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 SCGB3A1Q96QR1 104 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.8
HDLBP-222ENST00000449504 A0A0J9YXY3 114 aa3.77□□□□□ -1.81
HDLBP-222ENST00000449504 S100A7L2Q5SY68 101 aa3.77□□□□□ -1.81
HDLBP-222ENST00000449504 ATP5EP2Q5VTU8 51 aa3.77□□□□□ -1.81
HDLBP-222ENST00000449504 Q6JHZ5 121 aa3.77□□□□□ -1.81
HDLBP-222ENST00000449504 HRCT1Q6UXD1 115 aa3.77□□□□□ -1.81
HDLBP-222ENST00000449504 FAM19A3Q7Z5A8 133 aa3.77□□□□□ -1.81
HDLBP-222ENST00000449504 TMEM223A0PJW6 202 aa3.76□□□□□ -1.81
HDLBP-222ENST00000449504 LEPROTO15243 131 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms