RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TRAV23DV6A0A075B6W5 121 aa4.64□□□□□ -1.67
CDC42BPA-208ENST00000442054 CXCL6P80162 114 aa4.64□□□□□ -1.67
CDC42BPA-208ENST00000442054 F8WEM9 126 aa4.64□□□□□ -1.67
CDC42BPA-208ENST00000442054 TMEM258P61165 79 aa4.64□□□□□ -1.67
CDC42BPA-208ENST00000442054 DEFB105AQ8NG35 78 aa4.64□□□□□ -1.67
CDC42BPA-208ENST00000442054 FRAS1Q86XX4 4008 aa4.64□□□□□ -1.67
CDC42BPA-208ENST00000442054 RBM3P98179 157 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-208ENST00000442054 Q6ZQY7 126 aa4.64□□□□□ -1.67
CDC42BPA-208ENST00000442054 FAM168BA1KXE4 195 aa4.63□□□□□ -1.67
CDC42BPA-208ENST00000442054 ZNF73O43830 326 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-208ENST00000442054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-208ENST00000442054 M0R378 163 aa4.63□□□□□ -1.67
CDC42BPA-208ENST00000442054 DNAH8Q96JB1 4490 aa4.63□□□□□ -1.67
CDC42BPA-208ENST00000442054 A0A1W2PNN7 141 aa4.63□□□□□ -1.67
CDC42BPA-208ENST00000442054 H3BQ85 93 aa4.63□□□□□ -1.67
CDC42BPA-208ENST00000442054 H7BZZ5 65 aa4.63□□□□□ -1.67
CDC42BPA-208ENST00000442054 KLKP1Q107X0 134 aa4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 PRR4Q16378 134 aa4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 SPACA4Q8TDM5 124 aa4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 KCNQ1DNQ9H478 68 aa4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 PSORS1C2Q9UIG4 136 aa4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 SPRR1AP35321 89 aa4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 PRLHP81277 87 aa4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 PLA2G2DQ9UNK4 145 aa4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 ZNF706Q9Y5V0 76 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-208ENST00000442054 TLX1NBP0CAT3 122 aa4.61□□□□□ -1.67
CDC42BPA-208ENST00000442054 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
CDC42BPA-208ENST00000442054 IGLV5-48A0A075B6I7 105 aa4.61□□□□□ -1.67
CDC42BPA-208ENST00000442054 ALMS1Q8TCU4 4167 aa4.6□□□□□ -1.67
CDC42BPA-208ENST00000442054 PDE6GP18545 87 aa4.6□□□□□ -1.67
CDC42BPA-208ENST00000442054 STARD9Q9P2P6 4700 aa4.6□□□□□ -1.67
CDC42BPA-208ENST00000442054 PLAC8Q9NZF1 115 aa4.6□□□□□ -1.67
CDC42BPA-208ENST00000442054 V9GYY9 64 aa4.6□□□□□ -1.67
CDC42BPA-208ENST00000442054 LCE2BO14633 110 aa4.6□□□□□ -1.67
CDC42BPA-208ENST00000442054 TYMSOSQ8TAI1 123 aa4.6□□□□□ -1.67
CDC42BPA-208ENST00000442054 TRAV7A0A075B6U4 112 aa4.59□□□□□ -1.67
CDC42BPA-208ENST00000442054 Q8N377 158 aa4.59□□□□□ -1.67
CDC42BPA-208ENST00000442054 IGKV4-1P06312 121 aa4.59□□□□□ -1.67
CDC42BPA-208ENST00000442054 COX7BP24311 80 aa4.59□□□□□ -1.67
CDC42BPA-208ENST00000442054 HRCT1Q6UXD1 115 aa4.59□□□□□ -1.67
CDC42BPA-208ENST00000442054 Q9BRP9 147 aa4.59□□□□□ -1.67
CDC42BPA-208ENST00000442054 DNAH17Q9UFH2 4485 aa4.59□□□□□ -1.67
CDC42BPA-208ENST00000442054 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.68
CDC42BPA-208ENST00000442054 IGLV7-43P04211 117 aa4.59□□□□□ -1.68
CDC42BPA-208ENST00000442054 UBL5Q9BZL1 73 aa4.59□□□□□ -1.68
CDC42BPA-208ENST00000442054 PANO1I0J062 215 aa4.58□□□□□ -1.68
CDC42BPA-208ENST00000442054 SPINK6Q6UWN8 80 aa4.58□□□□□ -1.68
CDC42BPA-208ENST00000442054 DSCR8Q96T75 97 aa4.58□□□□□ -1.68
CDC42BPA-208ENST00000442054 OCR1Q9BZK8 76 aa4.57□□□□□ -1.68
CDC42BPA-208ENST00000442054 KMT2AQ03164 3969 aa4.57□□□□□ -1.68
CDC42BPA-208ENST00000442054 DNAH6Q9C0G6 4158 aa4.57□□□□□ -1.68
CDC42BPA-208ENST00000442054 ZNF861PO60384 105 aa4.57□□□□□ -1.68
CDC42BPA-208ENST00000442054 LAMTOR3Q9UHA4 124 aa4.56□□□□□ -1.68
CDC42BPA-208ENST00000442054 ERC2-IT1O76042 136 aa4.56□□□□□ -1.68
CDC42BPA-208ENST00000442054 FP248Q71RG6 208 aaPredicted RBP4.56□□□□□ -1.68
CDC42BPA-208ENST00000442054 PRR26Q8N8Z3 221 aa4.56□□□□□ -1.68
CDC42BPA-208ENST00000442054 IGLV1-50A0A075B6I6 118 aa4.55□□□□□ -1.68
CDC42BPA-208ENST00000442054 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
CDC42BPA-208ENST00000442054 SMIM29Q86T20 159 aa4.55□□□□□ -1.68
CDC42BPA-208ENST00000442054 SPRR4Q96PI1 79 aa4.55□□□□□ -1.68
CDC42BPA-208ENST00000442054 Q6ZRX8 168 aa4.54□□□□□ -1.68
CDC42BPA-208ENST00000442054 A0A0U1RQV1 116 aa4.53□□□□□ -1.68
CDC42BPA-208ENST00000442054 PRYO14603 147 aa4.53□□□□□ -1.68
CDC42BPA-208ENST00000442054 C20orf197Q8N268 126 aa4.53□□□□□ -1.68
CDC42BPA-208ENST00000442054 A0A1B0GW54 56 aa4.52□□□□□ -1.69
CDC42BPA-208ENST00000442054 DNAH11Q96DT5 4516 aa4.52□□□□□ -1.69
CDC42BPA-208ENST00000442054 Q6ZSA8 131 aa4.52□□□□□ -1.69
CDC42BPA-208ENST00000442054 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-208ENST00000442054 ANAPC11Q9NYG5 84 aa4.52□□□□□ -1.69
CDC42BPA-208ENST00000442054 H0Y9J4 135 aa4.51□□□□□ -1.69
CDC42BPA-208ENST00000442054 DSCR10P59022 87 aa4.51□□□□□ -1.69
CDC42BPA-208ENST00000442054 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
CDC42BPA-208ENST00000442054 Q8N9L7 120 aa4.51□□□□□ -1.69
CDC42BPA-208ENST00000442054 DHRS4-AS1Q9P1J3 65 aa4.5□□□□□ -1.69
CDC42BPA-208ENST00000442054 BPY2O14599 106 aa4.5□□□□□ -1.69
CDC42BPA-208ENST00000442054 SERP1Q9Y6X1 66 aa4.5□□□□□ -1.69
CDC42BPA-208ENST00000442054 PKD1P98161 4303 aa4.5□□□□□ -1.69
CDC42BPA-208ENST00000442054 DNAH5Q8TE73 4624 aa4.5□□□□□ -1.69
CDC42BPA-208ENST00000442054 IGLV8-61A0A075B6I0 122 aa4.5□□□□□ -1.69
CDC42BPA-208ENST00000442054 FAM236DA0A1B0GTK5 79 aa4.5□□□□□ -1.69
CDC42BPA-208ENST00000442054 FAM236CP0DP71 79 aa4.5□□□□□ -1.69
CDC42BPA-208ENST00000442054 LINC00304Q8N9R0 145 aa4.49□□□□□ -1.69
CDC42BPA-208ENST00000442054 ST20-AS1Q8NBB2 130 aa4.49□□□□□ -1.69
CDC42BPA-208ENST00000442054 MOBPQ13875 183 aa4.49□□□□□ -1.69
CDC42BPA-208ENST00000442054 NREPQ16612 68 aa4.49□□□□□ -1.69
CDC42BPA-208ENST00000442054 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
CDC42BPA-208ENST00000442054 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
CDC42BPA-208ENST00000442054 Q8NBF4 154 aa4.47□□□□□ -1.69
CDC42BPA-208ENST00000442054 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
CDC42BPA-208ENST00000442054 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
CDC42BPA-208ENST00000442054 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
CDC42BPA-208ENST00000442054 KMT2CQ8NEZ4 4911 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-208ENST00000442054 NDUFC1O43677 76 aa4.46□□□□□ -1.7
CDC42BPA-208ENST00000442054 PRR15Q8IV56 129 aa4.46□□□□□ -1.7
CDC42BPA-208ENST00000442054 C1orf195Q5TG92 126 aa4.46□□□□□ -1.7
CDC42BPA-208ENST00000442054 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-208ENST00000442054 FAT2Q9NYQ8 4349 aa4.45□□□□□ -1.7
CDC42BPA-208ENST00000442054 SPAG11AQ6PDA7 123 aa4.44□□□□□ -1.7
CDC42BPA-208ENST00000442054 KRTAP29-1A8MX34 341 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-208ENST00000442054 SPRR1BP22528 89 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms