RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 IFI27P40305 119 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 POLR2KP53803 58 aaKnown RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 RBM3P98179 157 aaKnown RBP1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 DEFB114Q30KQ6 69 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 HRCT1Q6UXD1 115 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 FOXI2Q6ZQN5 318 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 FAM19A2Q8N3H0 131 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 PRELID3AQ96N28 172 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 VAMP8Q9BV40 100 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 SNHG12Q9BXW3 62 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 UQCR10Q9UDW1 63 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 TP73-AS1Q9UF72 201 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 HHLA3Q9XRX5 114 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 HLA-DRB4X5D2U9 266 aa1.04□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRAV12-1A0A0B4J245 112 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 C7orf71A4D174 169 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGIPA6NJ69 53 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 H3BPC8 53 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 M0QY20 66 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 TCL1BO95988 128 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 HBDP02042 147 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 COX8AP10176 69 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 ZNF25P17030 456 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 RNASE4P34096 147 aaKnown RBP1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 KRTDAPP60985 99 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 SNRPD3P62318 126 aaKnown RBP1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 SPATA45Q537H7 98 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 COL5A1-AS1Q5SY13 56 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 SPANXN1Q5VSR9 72 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 ZNF705AQ6ZN79 300 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 SDIM1Q6ZPB5 146 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 ADM2Q7Z4H4 148 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 KRTAP8-1Q8IUC2 63 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q8NAQ8 132 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q8NDZ9 215 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q8TAT8 98 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 IFI27L1Q96BM0 104 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 TMEM141Q96I45 108 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 SMIM2Q9BVW6 85 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 PRO1933Q9H354 126 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 MRPL16Q9NX20 251 aaKnown RBP1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 HIGD1BQ9P298 99 aa1.03□□□□□ -2.24
HMGB1P18-201ENST00000438801 TMSB15BA0A087X1C1 80 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRAV13-1A0A0B4J241 112 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRBV10-1A0A0K0K1A3 114 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 LOC107984640A0A0U1RRK4 108 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 A0A1B0GU33 70 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 A6NED7 52 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 A8MWV9 139 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 F8VRH5 84 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 H3BQ85 93 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 H3BVH4 76 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 M0R2P5 195 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 GNRH2O43555 120 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 PSCAO43653 123 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 LINC00694P0DN24 101 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 PLNP26678 52 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 XCL1P47992 114 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 FXYD2P54710 66 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 UBE2BP63146 152 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 SEC11AP67812 179 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 RHOHQ15669 191 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 OCIAD2Q56VL3 154 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 BVES-AS1Q5T3Y7 98 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 SPINK6Q6UWN8 80 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 C2orf91Q6ZV80 131 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 DIRC1Q969H9 104 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 AP1S3Q96PC3 154 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 TIMM21Q9BVV7 248 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 SPANXDQ9BXN6 97 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 ICOSQ9Y6W8 199 aa1.02□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRAV12-3A0A0B4J271 114 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 MUC21A0A0G2JKD1 596 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 MUC21A0A140T8X8 626 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 SDHAF1A6NFY7 115 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 C11orf86A6NJI1 115 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 H3BRM9 83 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 I3L3M4 83 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 UQCRQO14949 82 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGLV6-57P01721 117 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGKCP01834 107 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 P0C880 135 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 DEFB131AP59861 70 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 DEFB1P60022 68 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 MRPS36P82909 103 aaKnown RBP1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 HSD52Q0P140 79 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 CFAP126Q5VTH2 177 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 TEN1Q86WV5 123 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 SCGB3A1Q96QR1 104 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 AMELXQ99217 191 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 CST9LQ9H4G1 147 aa1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 NHP2Q9NX24 153 aaKnown RBP1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 MRPL35Q9NZE8 188 aaKnown RBP1.01□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRBV7-3A0A075B6L6 115 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRBV25-1A0A075B6N4 114 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRAV12-2A0A075B6T6 113 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 TRAV7A0A075B6U4 112 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 IGKV2D-26A0A0A0MRZ7 120 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 A0A0B4J2C4 111 aa1□□□□□ -2.25
HMGB1P18-201ENST00000438801 A0A0J9YY99 117 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms