RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LINC01556Q5JQF7 62 aa7.32□□□□□ -1.24
HMGCS1-202ENST00000433297 LIMD2Q9BT23 127 aa7.31□□□□□ -1.24
HMGCS1-202ENST00000433297 H0Y9J4 135 aa7.3□□□□□ -1.24
HMGCS1-202ENST00000433297 CD164Q04900 197 aa7.3□□□□□ -1.24
HMGCS1-202ENST00000433297 PCOTHQ58A44 107 aa7.3□□□□□ -1.24
HMGCS1-202ENST00000433297 OXLD1Q5BKU9 147 aa7.3□□□□□ -1.24
HMGCS1-202ENST00000433297 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
HMGCS1-202ENST00000433297 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
HMGCS1-202ENST00000433297 SRRM2Q9UQ35 2752 aaKnown RBP7.28□□□□□ -1.24
HMGCS1-202ENST00000433297 H3BNG1 76 aa7.28□□□□□ -1.24
HMGCS1-202ENST00000433297 TENM3Q9P273 2699 aa7.27□□□□□ -1.25
HMGCS1-202ENST00000433297 LCA10Q71F78 164 aa7.27□□□□□ -1.25
HMGCS1-202ENST00000433297 LINC00588Q9Y4M8 146 aa7.27□□□□□ -1.25
HMGCS1-202ENST00000433297 COA5Q86WW8 74 aa7.27□□□□□ -1.25
HMGCS1-202ENST00000433297 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
HMGCS1-202ENST00000433297 CNBPP62633 177 aaKnown RBP7.26□□□□□ -1.25
HMGCS1-202ENST00000433297 SPAG11AQ6PDA7 123 aa7.26□□□□□ -1.25
HMGCS1-202ENST00000433297 C11orf45Q8TAV5 145 aa7.26□□□□□ -1.25
HMGCS1-202ENST00000433297 KTN1-AS1Q86SY8 53 aa7.25□□□□□ -1.25
HMGCS1-202ENST00000433297 SPANXA2-OT1Q8N9U9 137 aa7.25□□□□□ -1.25
HMGCS1-202ENST00000433297 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
HMGCS1-202ENST00000433297 INAFM1C9JVW0 142 aa7.25□□□□□ -1.25
HMGCS1-202ENST00000433297 OTOGQ6ZRI0 2925 aa7.25□□□□□ -1.25
HMGCS1-202ENST00000433297 TENM4Q6N022 2769 aa7.24□□□□□ -1.25
HMGCS1-202ENST00000433297 RBM12B-AS1Q9P1G2 102 aa7.24□□□□□ -1.25
HMGCS1-202ENST00000433297 FLNBO75369 2602 aaKnown RBP7.23□□□□□ -1.25
HMGCS1-202ENST00000433297 DNAH10OSP0CZ25 163 aa7.22□□□□□ -1.25
HMGCS1-202ENST00000433297 HELZ2Q9BYK8 2649 aaKnown RBP7.22□□□□□ -1.25
HMGCS1-202ENST00000433297 A8MWP4 228 aa7.22□□□□□ -1.25
HMGCS1-202ENST00000433297 ATP11AUNQ6ZP68 121 aa7.21□□□□□ -1.25
HMGCS1-202ENST00000433297 H3BPC8 53 aa7.21□□□□□ -1.26
HMGCS1-202ENST00000433297 NDUFS5O43920 106 aa7.21□□□□□ -1.26
HMGCS1-202ENST00000433297 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
HMGCS1-202ENST00000433297 Q75L30 129 aa7.2□□□□□ -1.26
HMGCS1-202ENST00000433297 FBN1P35555 2871 aaKnown RBP7.19□□□□□ -1.26
HMGCS1-202ENST00000433297 HECTD1Q9ULT8 2610 aa7.19□□□□□ -1.26
HMGCS1-202ENST00000433297 KRTAP10-11P60412 298 aa7.18□□□□□ -1.26
HMGCS1-202ENST00000433297 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
HMGCS1-202ENST00000433297 MAST4O15021 2626 aa7.17□□□□□ -1.26
HMGCS1-202ENST00000433297 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
HMGCS1-202ENST00000433297 PHF5AQ7RTV0 110 aaKnown RBP7.17□□□□□ -1.26
HMGCS1-202ENST00000433297 LINC00472Q9H8W2 130 aa7.17□□□□□ -1.26
HMGCS1-202ENST00000433297 CSMD3Q7Z407 3707 aa7.16□□□□□ -1.26
HMGCS1-202ENST00000433297 CHTF8P0CG12 524 aa7.16□□□□□ -1.26
HMGCS1-202ENST00000433297 IGLV8-61A0A075B6I0 122 aa7.15□□□□□ -1.26
HMGCS1-202ENST00000433297 MMP24-AS1A0A0U1RRL7 71 aa7.14□□□□□ -1.27
HMGCS1-202ENST00000433297 CDC42SE1Q9NRR8 79 aa7.14□□□□□ -1.27
HMGCS1-202ENST00000433297 KRTAP11-1Q8IUC1 163 aa7.14□□□□□ -1.27
HMGCS1-202ENST00000433297 A6NN06 94 aa7.14□□□□□ -1.27
HMGCS1-202ENST00000433297 NOTCH1P46531 2555 aa7.14□□□□□ -1.27
HMGCS1-202ENST00000433297 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
HMGCS1-202ENST00000433297 SPINK7P58062 85 aa7.13□□□□□ -1.27
HMGCS1-202ENST00000433297 MOBPQ13875 183 aa7.13□□□□□ -1.27
HMGCS1-202ENST00000433297 NSD1Q96L73 2696 aaPredicted RBP7.12□□□□□ -1.27
HMGCS1-202ENST00000433297 COL6A5A8TX70 2615 aa7.11□□□□□ -1.27
HMGCS1-202ENST00000433297 IGHV6-1A0A0B4J1U7 121 aa7.11□□□□□ -1.27
HMGCS1-202ENST00000433297 COL7A1Q02388 2944 aa7.09□□□□□ -1.27
HMGCS1-202ENST00000433297 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
HMGCS1-202ENST00000433297 C7orf65Q6ZTY9 151 aa7.08□□□□□ -1.28
HMGCS1-202ENST00000433297 HRES1P13985 223 aa7.08□□□□□ -1.28
HMGCS1-202ENST00000433297 ANK2Q01484 3957 aa7.07□□□□□ -1.28
HMGCS1-202ENST00000433297 PRR26Q8N8Z3 221 aa7.07□□□□□ -1.28
HMGCS1-202ENST00000433297 CDK2AP2O75956 126 aa7.06□□□□□ -1.28
HMGCS1-202ENST00000433297 STAB1Q9NY15 2570 aa7.05□□□□□ -1.28
HMGCS1-202ENST00000433297 TP53AIP1Q9HCN2 124 aa7.05□□□□□ -1.28
HMGCS1-202ENST00000433297 C8orf17Q9NRJ1 99 aa7.05□□□□□ -1.28
HMGCS1-202ENST00000433297 NBEAL1Q6ZS30 2694 aa7.03□□□□□ -1.28
HMGCS1-202ENST00000433297 K7EIL1 84 aa7.03□□□□□ -1.28
HMGCS1-202ENST00000433297 KRTAP1-5Q9BYS1 174 aa7.03□□□□□ -1.28
HMGCS1-202ENST00000433297 TENM2Q9NT68 2774 aa7.03□□□□□ -1.28
HMGCS1-202ENST00000433297 PRAC1Q96KF2 57 aa7.03□□□□□ -1.28
HMGCS1-202ENST00000433297 SPRR1BP22528 89 aa7.02□□□□□ -1.29
HMGCS1-202ENST00000433297 KMT2BQ9UMN6 2715 aaPredicted RBP7.01□□□□□ -1.29
HMGCS1-202ENST00000433297 SPINK6Q6UWN8 80 aa7□□□□□ -1.29
HMGCS1-202ENST00000433297 DNAH10Q8IVF4 4471 aa7□□□□□ -1.29
HMGCS1-202ENST00000433297 A0A087X002 238 aa7□□□□□ -1.29
HMGCS1-202ENST00000433297 NOTCH2NLQ7Z3S9 236 aa7□□□□□ -1.29
HMGCS1-202ENST00000433297 Q96NJ1 140 aa7□□□□□ -1.29
HMGCS1-202ENST00000433297 UBE2DNLQ8IWF7 75 aa6.99□□□□□ -1.29
HMGCS1-202ENST00000433297 Q6ZR54 194 aa6.99□□□□□ -1.29
HMGCS1-202ENST00000433297 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
HMGCS1-202ENST00000433297 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
HMGCS1-202ENST00000433297 J3QKU1 62 aa6.99□□□□□ -1.29
HMGCS1-202ENST00000433297 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
HMGCS1-202ENST00000433297 LINC00313P59037 77 aa6.98□□□□□ -1.29
HMGCS1-202ENST00000433297 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
HMGCS1-202ENST00000433297 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
HMGCS1-202ENST00000433297 PANO1I0J062 215 aa6.96□□□□□ -1.3
HMGCS1-202ENST00000433297 MDFIQ99750 246 aa6.94□□□□□ -1.3
HMGCS1-202ENST00000433297 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
HMGCS1-202ENST00000433297 RETNLBQ9BQ08 111 aa6.93□□□□□ -1.3
HMGCS1-202ENST00000433297 LYSTQ99698 3801 aa6.93□□□□□ -1.3
HMGCS1-202ENST00000433297 Q5W150 140 aa6.93□□□□□ -1.3
HMGCS1-202ENST00000433297 C8orf87E5RJ46 101 aa6.92□□□□□ -1.3
HMGCS1-202ENST00000433297 C14orf177Q52M58 125 aa6.91□□□□□ -1.3
HMGCS1-202ENST00000433297 DNAH1Q9P2D7 4330 aa6.9□□□□□ -1.3
HMGCS1-202ENST00000433297 ACYP2P14621 99 aa6.9□□□□□ -1.3
HMGCS1-202ENST00000433297 A0A1B0GU69 56 aa6.88□□□□□ -1.31
HMGCS1-202ENST00000433297 STAB2Q8WWQ8 2551 aa6.88□□□□□ -1.31
HMGCS1-202ENST00000433297 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms