RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TENM3Q9P273 2699 aa7.01□□□□□ -1.29
TCOF1-204ENST00000427724 GVQW2A0A096LPI5 108 aaPredicted RBP7.01□□□□□ -1.29
TCOF1-204ENST00000427724 LINC00528Q8N1L1 170 aa7□□□□□ -1.29
TCOF1-204ENST00000427724 FLG2Q5D862 2391 aaPredicted RBP7□□□□□ -1.29
TCOF1-204ENST00000427724 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
TCOF1-204ENST00000427724 LOC110117498A0A087WWA1 95 aa6.99□□□□□ -1.29
TCOF1-204ENST00000427724 PDZD2O15018 2839 aa6.98□□□□□ -1.29
TCOF1-204ENST00000427724 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
TCOF1-204ENST00000427724 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
TCOF1-204ENST00000427724 A0A087WSZ3 146 aa6.96□□□□□ -1.3
TCOF1-204ENST00000427724 OBSCN-AS1Q96MR7 158 aa6.95□□□□□ -1.3
TCOF1-204ENST00000427724 IGLV6-57P01721 117 aa6.94□□□□□ -1.3
TCOF1-204ENST00000427724 PRR34Q9NV39 138 aa6.94□□□□□ -1.3
TCOF1-204ENST00000427724 ELOF1P60002 83 aaKnown RBP6.94□□□□□ -1.3
TCOF1-204ENST00000427724 RETNLBQ9BQ08 111 aa6.93□□□□□ -1.3
TCOF1-204ENST00000427724 TENM1Q9UKZ4 2725 aa6.93□□□□□ -1.3
TCOF1-204ENST00000427724 IGHV6-1A0A0B4J1U7 121 aa6.93□□□□□ -1.3
TCOF1-204ENST00000427724 CASC2Q6XLA1 102 aa6.93□□□□□ -1.3
TCOF1-204ENST00000427724 TENM2Q9NT68 2774 aa6.92□□□□□ -1.3
TCOF1-204ENST00000427724 A8MUN3 132 aa6.92□□□□□ -1.3
TCOF1-204ENST00000427724 FP248Q71RG6 208 aaPredicted RBP6.92□□□□□ -1.3
TCOF1-204ENST00000427724 C15orf56Q8N910 161 aa6.92□□□□□ -1.3
TCOF1-204ENST00000427724 VPREB1P12018 145 aa6.91□□□□□ -1.3
TCOF1-204ENST00000427724 FBN1P35555 2871 aaKnown RBP6.9□□□□□ -1.31
TCOF1-204ENST00000427724 PCOTHQ58A44 107 aa6.9□□□□□ -1.31
TCOF1-204ENST00000427724 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
TCOF1-204ENST00000427724 SERTAD4-AS1Q5TG53 156 aa6.89□□□□□ -1.31
TCOF1-204ENST00000427724 ST20-AS1Q8NBB2 130 aa6.89□□□□□ -1.31
TCOF1-204ENST00000427724 C1orf64Q8NEQ6 169 aa6.88□□□□□ -1.31
TCOF1-204ENST00000427724 H0Y9P7 68 aa6.88□□□□□ -1.31
TCOF1-204ENST00000427724 ANAPC11Q9NYG5 84 aa6.88□□□□□ -1.31
TCOF1-204ENST00000427724 PSORS1C2Q9UIG4 136 aa6.87□□□□□ -1.31
TCOF1-204ENST00000427724 Q8NDZ9 215 aa6.86□□□□□ -1.31
TCOF1-204ENST00000427724 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
TCOF1-204ENST00000427724 FAM229BQ4G0N7 80 aa6.86□□□□□ -1.31
TCOF1-204ENST00000427724 ZNF861PO60384 105 aa6.85□□□□□ -1.31
TCOF1-204ENST00000427724 ERC2-IT1O76042 136 aa6.85□□□□□ -1.31
TCOF1-204ENST00000427724 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
TCOF1-204ENST00000427724 Q6ZRX8 168 aa6.85□□□□□ -1.31
TCOF1-204ENST00000427724 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
TCOF1-204ENST00000427724 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.32
TCOF1-204ENST00000427724 COX6B2Q6YFQ2 88 aa6.84□□□□□ -1.32
TCOF1-204ENST00000427724 K7EQZ3 153 aa6.82□□□□□ -1.32
TCOF1-204ENST00000427724 hDV103S1A0JD37 113 aa6.82□□□□□ -1.32
TCOF1-204ENST00000427724 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
TCOF1-204ENST00000427724 Q8NBF4 154 aa6.81□□□□□ -1.32
TCOF1-204ENST00000427724 KRTAP1-5Q9BYS1 174 aa6.81□□□□□ -1.32
TCOF1-204ENST00000427724 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
TCOF1-204ENST00000427724 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
TCOF1-204ENST00000427724 VWFP04275 2813 aa6.8□□□□□ -1.32
TCOF1-204ENST00000427724 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
TCOF1-204ENST00000427724 TGP01266 2768 aa6.79□□□□□ -1.32
TCOF1-204ENST00000427724 A0A0G2JQZ4 141 aa6.79□□□□□ -1.32
TCOF1-204ENST00000427724 Q5VSD8 79 aa6.79□□□□□ -1.32
TCOF1-204ENST00000427724 Q8N377 158 aa6.78□□□□□ -1.32
TCOF1-204ENST00000427724 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
TCOF1-204ENST00000427724 KCNQ1DNQ9H478 68 aa6.78□□□□□ -1.32
TCOF1-204ENST00000427724 KRTAP10-2P60368 255 aa6.78□□□□□ -1.32
TCOF1-204ENST00000427724 IGLV1-50A0A075B6I6 118 aa6.77□□□□□ -1.33
TCOF1-204ENST00000427724 CD164Q04900 197 aa6.77□□□□□ -1.33
TCOF1-204ENST00000427724 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
TCOF1-204ENST00000427724 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
TCOF1-204ENST00000427724 ATP11AUNQ6ZP68 121 aa6.75□□□□□ -1.33
TCOF1-204ENST00000427724 PRR26Q8N8Z3 221 aa6.75□□□□□ -1.33
TCOF1-204ENST00000427724 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
TCOF1-204ENST00000427724 KRTAP10-1P60331 282 aa6.74□□□□□ -1.33
TCOF1-204ENST00000427724 PRR15Q8IV56 129 aa6.74□□□□□ -1.33
TCOF1-204ENST00000427724 Q96NJ1 140 aa6.73□□□□□ -1.33
TCOF1-204ENST00000427724 TRRAPQ9Y4A5 3859 aa6.73□□□□□ -1.33
TCOF1-204ENST00000427724 SRRM2Q9UQ35 2752 aaKnown RBP6.72□□□□□ -1.33
TCOF1-204ENST00000427724 SSBP3-AS1Q7Z2R9 100 aa6.71□□□□□ -1.33
TCOF1-204ENST00000427724 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
TCOF1-204ENST00000427724 A0A1W2PNM2 257 aa6.71□□□□□ -1.34
TCOF1-204ENST00000427724 A0A1B0GW54 56 aa6.7□□□□□ -1.34
TCOF1-204ENST00000427724 KTN1-AS1Q86SY8 53 aa6.69□□□□□ -1.34
TCOF1-204ENST00000427724 COA5Q86WW8 74 aa6.69□□□□□ -1.34
TCOF1-204ENST00000427724 SPINK1P00995 79 aa6.68□□□□□ -1.34
TCOF1-204ENST00000427724 Q1T7F1 81 aa6.68□□□□□ -1.34
TCOF1-204ENST00000427724 LINC00313P59037 77 aa6.67□□□□□ -1.34
TCOF1-204ENST00000427724 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
TCOF1-204ENST00000427724 Q6ZR54 194 aa6.67□□□□□ -1.34
TCOF1-204ENST00000427724 IGLV5-48A0A075B6I7 105 aa6.65□□□□□ -1.35
TCOF1-204ENST00000427724 IGLV7-46A0A075B6I9 117 aa6.65□□□□□ -1.35
TCOF1-204ENST00000427724 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.35
TCOF1-204ENST00000427724 AKAP9Q99996 3911 aa6.65□□□□□ -1.35
TCOF1-204ENST00000427724 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
TCOF1-204ENST00000427724 SPRR4Q96PI1 79 aa6.64□□□□□ -1.35
TCOF1-204ENST00000427724 H3BPC8 53 aa6.63□□□□□ -1.35
TCOF1-204ENST00000427724 DSCR10P59022 87 aa6.62□□□□□ -1.35
TCOF1-204ENST00000427724 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
TCOF1-204ENST00000427724 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
TCOF1-204ENST00000427724 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
TCOF1-204ENST00000427724 H3BS24 57 aa6.61□□□□□ -1.35
TCOF1-204ENST00000427724 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
TCOF1-204ENST00000427724 C7orf65Q6ZTY9 151 aa6.59□□□□□ -1.35
TCOF1-204ENST00000427724 A8MWP4 228 aa6.58□□□□□ -1.36
TCOF1-204ENST00000427724 A0A1B0GU69 56 aa6.57□□□□□ -1.36
TCOF1-204ENST00000427724 M0R2T5 61 aa6.57□□□□□ -1.36
TCOF1-204ENST00000427724 Q5VV11 94 aa6.57□□□□□ -1.36
TCOF1-204ENST00000427724 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms