RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 OTOGQ6ZRI0 2925 aa7.11□□□□□ -1.27
CCDC40-204ENST00000397545 PRR34Q9NV39 138 aa7.1□□□□□ -1.27
CCDC40-204ENST00000397545 C1orf134Q5TEV5 83 aa7.1□□□□□ -1.27
CCDC40-204ENST00000397545 Q8N377 158 aa7.1□□□□□ -1.27
CCDC40-204ENST00000397545 C15orf56Q8N910 161 aa7.09□□□□□ -1.28
CCDC40-204ENST00000397545 LIMD2Q9BT23 127 aa7.09□□□□□ -1.28
CCDC40-204ENST00000397545 TRAV22A0A0B4J277 110 aa7.08□□□□□ -1.28
CCDC40-204ENST00000397545 H7BZZ5 65 aa7.08□□□□□ -1.28
CCDC40-204ENST00000397545 A8MUN3 132 aa7.08□□□□□ -1.28
CCDC40-204ENST00000397545 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
CCDC40-204ENST00000397545 TENM1Q9UKZ4 2725 aa7.07□□□□□ -1.28
CCDC40-204ENST00000397545 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
CCDC40-204ENST00000397545 LINC00336Q6ZUF6 198 aa7.07□□□□□ -1.28
CCDC40-204ENST00000397545 KLKP1Q107X0 134 aa7.07□□□□□ -1.28
CCDC40-204ENST00000397545 A0A1B0GW54 56 aa7.07□□□□□ -1.28
CCDC40-204ENST00000397545 C16orf90A8MZG2 172 aa7.07□□□□□ -1.28
CCDC40-204ENST00000397545 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
CCDC40-204ENST00000397545 IGLV1-50A0A075B6I6 118 aa7.06□□□□□ -1.28
CCDC40-204ENST00000397545 LINC00612Q8N6U2 182 aa7.05□□□□□ -1.28
CCDC40-204ENST00000397545 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
CCDC40-204ENST00000397545 ERC2-IT1O76042 136 aa7.04□□□□□ -1.28
CCDC40-204ENST00000397545 CASC10Q5T4H9 136 aa7.04□□□□□ -1.28
CCDC40-204ENST00000397545 IGLV8-61A0A075B6I0 122 aa7.02□□□□□ -1.29
CCDC40-204ENST00000397545 KRTAP10-11P60412 298 aa7.02□□□□□ -1.29
CCDC40-204ENST00000397545 TP53AIP1Q9HCN2 124 aa7.02□□□□□ -1.29
CCDC40-204ENST00000397545 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
CCDC40-204ENST00000397545 OBSCN-AS1Q96MR7 158 aa7.01□□□□□ -1.29
CCDC40-204ENST00000397545 A0A1W2PNM2 257 aa7.01□□□□□ -1.29
CCDC40-204ENST00000397545 A0A1B0GU69 56 aa7□□□□□ -1.29
CCDC40-204ENST00000397545 TRRAPQ9Y4A5 3859 aa7□□□□□ -1.29
CCDC40-204ENST00000397545 A8MWP4 228 aa6.99□□□□□ -1.29
CCDC40-204ENST00000397545 K7EIL1 84 aa6.98□□□□□ -1.29
CCDC40-204ENST00000397545 ANAPC11Q9NYG5 84 aa6.98□□□□□ -1.29
CCDC40-204ENST00000397545 RTL8CO15255 209 aa6.98□□□□□ -1.29
CCDC40-204ENST00000397545 C7orf65Q6ZTY9 151 aa6.98□□□□□ -1.29
CCDC40-204ENST00000397545 ACYP2P14621 99 aa6.97□□□□□ -1.29
CCDC40-204ENST00000397545 H3BPC8 53 aa6.97□□□□□ -1.29
CCDC40-204ENST00000397545 LINC01600Q96MT4 127 aa6.96□□□□□ -1.29
CCDC40-204ENST00000397545 COA5Q86WW8 74 aa6.96□□□□□ -1.3
CCDC40-204ENST00000397545 PRR15Q8IV56 129 aa6.96□□□□□ -1.3
CCDC40-204ENST00000397545 CYSTM1Q9H1C7 97 aa6.96□□□□□ -1.3
CCDC40-204ENST00000397545 Q8NDZ9 215 aa6.95□□□□□ -1.3
CCDC40-204ENST00000397545 FLG2Q5D862 2391 aaPredicted RBP6.95□□□□□ -1.3
CCDC40-204ENST00000397545 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
CCDC40-204ENST00000397545 LINC00313P59037 77 aa6.94□□□□□ -1.3
CCDC40-204ENST00000397545 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
CCDC40-204ENST00000397545 FBN1P35555 2871 aaKnown RBP6.9□□□□□ -1.3
CCDC40-204ENST00000397545 PKD1L1Q8TDX9 2849 aa6.9□□□□□ -1.3
CCDC40-204ENST00000397545 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.31
CCDC40-204ENST00000397545 IGLV5-48A0A075B6I7 105 aa6.88□□□□□ -1.31
CCDC40-204ENST00000397545 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
CCDC40-204ENST00000397545 C9orf163Q8N9P6 203 aa6.88□□□□□ -1.31
CCDC40-204ENST00000397545 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
CCDC40-204ENST00000397545 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
CCDC40-204ENST00000397545 DSCR10P59022 87 aa6.87□□□□□ -1.31
CCDC40-204ENST00000397545 LOC101927531A0A1B0GV80 90 aa6.87□□□□□ -1.31
CCDC40-204ENST00000397545 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
CCDC40-204ENST00000397545 Q96NJ1 140 aa6.87□□□□□ -1.31
CCDC40-204ENST00000397545 PLA2G2DQ9UNK4 145 aa6.84□□□□□ -1.31
CCDC40-204ENST00000397545 A0A1B0GVX0 72 aa6.84□□□□□ -1.31
CCDC40-204ENST00000397545 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
CCDC40-204ENST00000397545 TENM3Q9P273 2699 aa6.83□□□□□ -1.32
CCDC40-204ENST00000397545 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
CCDC40-204ENST00000397545 ZNF861PO60384 105 aa6.83□□□□□ -1.32
CCDC40-204ENST00000397545 WWC2-AS2Q96NR7 200 aa6.83□□□□□ -1.32
CCDC40-204ENST00000397545 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
CCDC40-204ENST00000397545 PSORS1C2Q9UIG4 136 aa6.81□□□□□ -1.32
CCDC40-204ENST00000397545 A0A087WTM6 91 aa6.81□□□□□ -1.32
CCDC40-204ENST00000397545 PRR26Q8N8Z3 221 aa6.8□□□□□ -1.32
CCDC40-204ENST00000397545 C8orf87E5RJ46 101 aa6.79□□□□□ -1.32
CCDC40-204ENST00000397545 SPRR4Q96PI1 79 aa6.78□□□□□ -1.32
CCDC40-204ENST00000397545 FAM229BQ4G0N7 80 aa6.78□□□□□ -1.32
CCDC40-204ENST00000397545 UQCR11O14957 56 aa6.76□□□□□ -1.33
CCDC40-204ENST00000397545 Q5XG85 94 aa6.76□□□□□ -1.33
CCDC40-204ENST00000397545 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
CCDC40-204ENST00000397545 WIPF1O43516 503 aa6.76□□□□□ -1.33
CCDC40-204ENST00000397545 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
CCDC40-204ENST00000397545 OXTP01178 125 aa6.75□□□□□ -1.33
CCDC40-204ENST00000397545 SSBP3-AS1Q7Z2R9 100 aa6.75□□□□□ -1.33
CCDC40-204ENST00000397545 IGLV5-37A0A075B6J1 123 aa6.74□□□□□ -1.33
CCDC40-204ENST00000397545 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
CCDC40-204ENST00000397545 APLNQ9ULZ1 77 aa6.74□□□□□ -1.33
CCDC40-204ENST00000397545 C9orf92A6NGG3 77 aa6.73□□□□□ -1.33
CCDC40-204ENST00000397545 MIR22HGQ0VDD5 57 aa6.72□□□□□ -1.33
CCDC40-204ENST00000397545 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
CCDC40-204ENST00000397545 IGLV7-43P04211 117 aa6.71□□□□□ -1.33
CCDC40-204ENST00000397545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.71□□□□□ -1.33
CCDC40-204ENST00000397545 TGP01266 2768 aa6.71□□□□□ -1.34
CCDC40-204ENST00000397545 Q8N1X5 172 aa6.7□□□□□ -1.34
CCDC40-204ENST00000397545 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
CCDC40-204ENST00000397545 Q1T7F1 81 aa6.67□□□□□ -1.34
CCDC40-204ENST00000397545 SPRR1AP35321 89 aa6.67□□□□□ -1.34
CCDC40-204ENST00000397545 KRTAP26-1Q6PEX3 210 aa6.67□□□□□ -1.34
CCDC40-204ENST00000397545 CD164Q04900 197 aa6.66□□□□□ -1.34
CCDC40-204ENST00000397545 LINC00304Q8N9R0 145 aa6.66□□□□□ -1.34
CCDC40-204ENST00000397545 TNP2Q05952 138 aa6.64□□□□□ -1.35
CCDC40-204ENST00000397545 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
CCDC40-204ENST00000397545 KRTAP1-5Q9BYS1 174 aa6.63□□□□□ -1.35
CCDC40-204ENST00000397545 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
CCDC40-204ENST00000397545 MMP24-AS1A0A0U1RRL7 71 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms