RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 C12orf57Q99622 126 aa9.41□□□□□ -0.9
EXOSC3-202ENST00000396521 PRO1933Q9H354 126 aa9.41□□□□□ -0.9
EXOSC3-202ENST00000396521 TAL2Q16559 108 aa9.4□□□□□ -0.9
EXOSC3-202ENST00000396521 HSD52Q0P140 79 aa9.39□□□□□ -0.91
EXOSC3-202ENST00000396521 COX6B2Q6YFQ2 88 aa9.39□□□□□ -0.91
EXOSC3-202ENST00000396521 TMEM238LA0A1B0GVL6 79 aa9.38□□□□□ -0.91
EXOSC3-202ENST00000396521 A6NJY4 79 aa9.38□□□□□ -0.91
EXOSC3-202ENST00000396521 H7C2G1 150 aa9.37□□□□□ -0.91
EXOSC3-202ENST00000396521 CEND1Q8N111 149 aa9.37□□□□□ -0.91
EXOSC3-202ENST00000396521 RAB37Q96AX2 223 aa9.37□□□□□ -0.91
EXOSC3-202ENST00000396521 RPL37P61927 97 aaKnown RBP9.36□□□□□ -0.91
EXOSC3-202ENST00000396521 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
EXOSC3-202ENST00000396521 TEX49A0A1B0GTD5 131 aa9.34□□□□□ -0.91
EXOSC3-202ENST00000396521 ELOF1P60002 83 aaKnown RBP9.34□□□□□ -0.91
EXOSC3-202ENST00000396521 TSTD3H0UI37 97 aa9.33□□□□□ -0.92
EXOSC3-202ENST00000396521 COX7BP24311 80 aa9.33□□□□□ -0.92
EXOSC3-202ENST00000396521 A0A0B4J2C4 111 aa9.32□□□□□ -0.92
EXOSC3-202ENST00000396521 C1orf195Q5TG92 126 aa9.32□□□□□ -0.92
EXOSC3-202ENST00000396521 FXYD2P54710 66 aa9.31□□□□□ -0.92
EXOSC3-202ENST00000396521 Q1RN00 199 aa9.31□□□□□ -0.92
EXOSC3-202ENST00000396521 SMIM11BQ8TCY0 68 aa9.31□□□□□ -0.92
EXOSC3-202ENST00000396521 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
EXOSC3-202ENST00000396521 A0A1B0GWB2 263 aa9.3□□□□□ -0.92
EXOSC3-202ENST00000396521 CFC1P0CG37 223 aa9.29□□□□□ -0.92
EXOSC3-202ENST00000396521 DEFB105AQ8NG35 78 aa9.29□□□□□ -0.92
EXOSC3-202ENST00000396521 NHP2Q9NX24 153 aaKnown RBP9.29□□□□□ -0.92
EXOSC3-202ENST00000396521 VAMP3Q15836 100 aa9.28□□□□□ -0.92
EXOSC3-202ENST00000396521 TCL1BO95988 128 aa9.27□□□□□ -0.93
EXOSC3-202ENST00000396521 SMIM29Q86T20 159 aa9.27□□□□□ -0.93
EXOSC3-202ENST00000396521 M0R143 59 aa9.26□□□□□ -0.93
EXOSC3-202ENST00000396521 K7ERJ3 54 aa9.25□□□□□ -0.93
EXOSC3-202ENST00000396521 PRO1854Q9UHT4 67 aa9.25□□□□□ -0.93
EXOSC3-202ENST00000396521 IGLV5-48A0A075B6I7 105 aa9.24□□□□□ -0.93
EXOSC3-202ENST00000396521 BVES-AS1Q5T3Y7 98 aa9.24□□□□□ -0.93
EXOSC3-202ENST00000396521 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
EXOSC3-202ENST00000396521 PSMB2P49721 201 aa9.18□□□□□ -0.94
EXOSC3-202ENST00000396521 ATP11AUNQ6ZP68 121 aa9.17□□□□□ -0.94
EXOSC3-202ENST00000396521 hADV29S1A0JD25 119 aa9.16□□□□□ -0.94
EXOSC3-202ENST00000396521 SNCGO76070 127 aa9.16□□□□□ -0.94
EXOSC3-202ENST00000396521 BATFQ16520 125 aa9.16□□□□□ -0.94
EXOSC3-202ENST00000396521 LINC00575Q6W349 94 aa9.16□□□□□ -0.94
EXOSC3-202ENST00000396521 KRTAP9-7A8MTY7 169 aa9.15□□□□□ -0.94
EXOSC3-202ENST00000396521 H0YGX0 51 aa9.15□□□□□ -0.94
EXOSC3-202ENST00000396521 TRIAP1O43715 76 aa9.15□□□□□ -0.94
EXOSC3-202ENST00000396521 F8WEM9 126 aa9.14□□□□□ -0.95
EXOSC3-202ENST00000396521 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.13□□□□□ -0.95
EXOSC3-202ENST00000396521 COX6CP09669 75 aa9.13□□□□□ -0.95
EXOSC3-202ENST00000396521 Q6ZQY7 126 aa9.13□□□□□ -0.95
EXOSC3-202ENST00000396521 Q75L30 129 aa9.13□□□□□ -0.95
EXOSC3-202ENST00000396521 Q6Q795 121 aa9.12□□□□□ -0.95
EXOSC3-202ENST00000396521 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
EXOSC3-202ENST00000396521 Q6JHZ5 121 aa9.1□□□□□ -0.95
EXOSC3-202ENST00000396521 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
EXOSC3-202ENST00000396521 CLEC2BQ92478 149 aa9.08□□□□□ -0.96
EXOSC3-202ENST00000396521 FAM218AQ96MZ4 157 aa9.08□□□□□ -0.96
EXOSC3-202ENST00000396521 A0A1B0GX51 115 aa9.07□□□□□ -0.96
EXOSC3-202ENST00000396521 DNAL4O96015 105 aa9.07□□□□□ -0.96
EXOSC3-202ENST00000396521 SCGB1C2P0DMR2 95 aa9.07□□□□□ -0.96
EXOSC3-202ENST00000396521 OBSCN-AS1Q96MR7 158 aa9.06□□□□□ -0.96
EXOSC3-202ENST00000396521 TRBV7-7A0A0K0K1E9 115 aa9.05□□□□□ -0.96
EXOSC3-202ENST00000396521 OCIAD2Q56VL3 154 aa9.04□□□□□ -0.96
EXOSC3-202ENST00000396521 PPDPFLQ8WWR9 84 aa9.04□□□□□ -0.96
EXOSC3-202ENST00000396521 GHRHP01286 108 aa9.03□□□□□ -0.96
EXOSC3-202ENST00000396521 LYRM7Q5U5X0 104 aa9.03□□□□□ -0.96
EXOSC3-202ENST00000396521 NAA38Q9BRA0 125 aaKnown RBP9.03□□□□□ -0.96
EXOSC3-202ENST00000396521 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.97
EXOSC3-202ENST00000396521 TRBV20-1A0A075B6N2 111 aa9.01□□□□□ -0.97
EXOSC3-202ENST00000396521 PCP4L1A6NKN8 68 aa9.01□□□□□ -0.97
EXOSC3-202ENST00000396521 SNHG12Q9BXW3 62 aa9□□□□□ -0.97
EXOSC3-202ENST00000396521 ORMDL1Q9P0S3 153 aa8.99□□□□□ -0.97
EXOSC3-202ENST00000396521 LST1O00453 97 aa8.98□□□□□ -0.97
EXOSC3-202ENST00000396521 IGFL1Q6UW32 110 aa8.98□□□□□ -0.97
EXOSC3-202ENST00000396521 H3BUT2 72 aa8.97□□□□□ -0.97
EXOSC3-202ENST00000396521 TRACP01848 142 aa8.97□□□□□ -0.97
EXOSC3-202ENST00000396521 FABP2P12104 132 aa8.97□□□□□ -0.97
EXOSC3-202ENST00000396521 Q96NJ1 140 aa8.97□□□□□ -0.97
EXOSC3-202ENST00000396521 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
EXOSC3-202ENST00000396521 H3BQ85 93 aa8.95□□□□□ -0.98
EXOSC3-202ENST00000396521 C20orf166-AS1Q96NR2 134 aa8.95□□□□□ -0.98
EXOSC3-202ENST00000396521 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
EXOSC3-202ENST00000396521 SS18L2Q9UHA2 77 aa8.94□□□□□ -0.98
EXOSC3-202ENST00000396521 TAX1BP3O14907 124 aa8.93□□□□□ -0.98
EXOSC3-202ENST00000396521 COL5A1-AS1Q5SY13 56 aa8.93□□□□□ -0.98
EXOSC3-202ENST00000396521 NDUFV3P56181 108 aaKnown RBP8.92□□□□□ -0.98
EXOSC3-202ENST00000396521 A8MUU9 505 aa8.91□□□□□ -0.98
EXOSC3-202ENST00000396521 A0A1W2PPM0 123 aa8.9□□□□□ -0.98
EXOSC3-202ENST00000396521 TMEM256-PLSCR3K7ERE1 68 aa8.9□□□□□ -0.98
EXOSC3-202ENST00000396521 SSPOA2VEC9 5147 aa8.9□□□□□ -0.99
EXOSC3-202ENST00000396521 A0A1B0GV72 72 aa8.89□□□□□ -0.99
EXOSC3-202ENST00000396521 USH2AO75445 5202 aa8.89□□□□□ -0.99
EXOSC3-202ENST00000396521 H3BMG7 143 aa8.88□□□□□ -0.99
EXOSC3-202ENST00000396521 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
EXOSC3-202ENST00000396521 BAALC-AS2P0C853 105 aa8.84□□□□□ -0.99
EXOSC3-202ENST00000396521 ANKRD29Q8N6D5 301 aa8.84□□□□□ -0.99
EXOSC3-202ENST00000396521 SPCS1Q9Y6A9 102 aa8.84□□□□□ -0.99
EXOSC3-202ENST00000396521 C9JAW5 83 aa8.83□□□□□ -1
EXOSC3-202ENST00000396521 TEN1Q86WV5 123 aa8.83□□□□□ -1
EXOSC3-202ENST00000396521 MT2AP02795 61 aa8.82□□□□□ -1
EXOSC3-202ENST00000396521 FCGBPQ9Y6R7 5405 aaPredicted RBP8.82□□□□□ -1
EXOSC3-202ENST00000396521 FAM236DA0A1B0GTK5 79 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 199.1 ms