RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 VWFP04275 2813 aa3.44□□□□□ -1.86
VPS41-203ENST00000395969 M0R378 163 aa3.44□□□□□ -1.86
VPS41-203ENST00000395969 ZNF73O43830 326 aaPredicted RBP3.44□□□□□ -1.86
VPS41-203ENST00000395969 CDK2AP2O75956 126 aa3.44□□□□□ -1.86
VPS41-203ENST00000395969 A6NED7 52 aa3.44□□□□□ -1.86
VPS41-203ENST00000395969 SYCNQ0VAF6 134 aa3.44□□□□□ -1.86
VPS41-203ENST00000395969 Q6ZR54 194 aa3.44□□□□□ -1.86
VPS41-203ENST00000395969 SMIM29Q86T20 159 aa3.44□□□□□ -1.86
VPS41-203ENST00000395969 PRR15LQ9BU68 103 aa3.44□□□□□ -1.86
VPS41-203ENST00000395969 DEFB4AO15263 64 aa3.43□□□□□ -1.86
VPS41-203ENST00000395969 NOTCH2Q04721 2471 aa3.43□□□□□ -1.86
VPS41-203ENST00000395969 UNQ6190/PRO20217Q6UXQ8 127 aa3.43□□□□□ -1.86
VPS41-203ENST00000395969 ACANP16112 2415 aa3.43□□□□□ -1.86
VPS41-203ENST00000395969 HCG22E2RYF7 251 aa3.43□□□□□ -1.86
VPS41-203ENST00000395969 PSCAO43653 123 aa3.43□□□□□ -1.86
VPS41-203ENST00000395969 XAGE1AQ9HD64 81 aa3.43□□□□□ -1.86
VPS41-203ENST00000395969 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
VPS41-203ENST00000395969 HIGD2BQ4VC39 106 aa3.42□□□□□ -1.86
VPS41-203ENST00000395969 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
VPS41-203ENST00000395969 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
VPS41-203ENST00000395969 C16orf90A8MZG2 172 aa3.42□□□□□ -1.86
VPS41-203ENST00000395969 IGLV5-48A0A075B6I7 105 aa3.41□□□□□ -1.86
VPS41-203ENST00000395969 Q5VV11 94 aa3.41□□□□□ -1.86
VPS41-203ENST00000395969 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.41□□□□□ -1.86
VPS41-203ENST00000395969 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.86
VPS41-203ENST00000395969 ETDCA0A1B0GVM5 59 aa3.4□□□□□ -1.86
VPS41-203ENST00000395969 UBE2BP63146 152 aa3.4□□□□□ -1.86
VPS41-203ENST00000395969 ST20-AS1Q8NBB2 130 aa3.4□□□□□ -1.86
VPS41-203ENST00000395969 DNAH17Q9UFH2 4485 aa3.4□□□□□ -1.87
VPS41-203ENST00000395969 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
VPS41-203ENST00000395969 NDUFS5O43920 106 aa3.4□□□□□ -1.87
VPS41-203ENST00000395969 SPRR1BP22528 89 aa3.4□□□□□ -1.87
VPS41-203ENST00000395969 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
VPS41-203ENST00000395969 DNAH8Q96JB1 4490 aa3.4□□□□□ -1.87
VPS41-203ENST00000395969 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
VPS41-203ENST00000395969 RPL37AP8A6NKH3 93 aa3.39□□□□□ -1.87
VPS41-203ENST00000395969 WWC2-AS2Q96NR7 200 aa3.39□□□□□ -1.87
VPS41-203ENST00000395969 ZNF706Q9Y5V0 76 aaPredicted RBP3.39□□□□□ -1.87
VPS41-203ENST00000395969 NBDYA0A0U1RRE5 68 aa3.39□□□□□ -1.87
VPS41-203ENST00000395969 WFDC13Q8IUB5 93 aa3.39□□□□□ -1.87
VPS41-203ENST00000395969 CAMK2N2Q96S95 79 aa3.39□□□□□ -1.87
VPS41-203ENST00000395969 HECTD1Q9ULT8 2610 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 NDUFB1O75438 58 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 DSCR10P59022 87 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 Q8N377 158 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 C9orf163Q8N9P6 203 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 KRTAP1-5Q9BYS1 174 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 FRAS1Q86XX4 4008 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 A0A1W2PNM2 257 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 DHRS4-AS1Q9P1J3 65 aa3.38□□□□□ -1.87
VPS41-203ENST00000395969 UBE2AP49459 152 aa3.37□□□□□ -1.87
VPS41-203ENST00000395969 LCA10Q71F78 164 aa3.37□□□□□ -1.87
VPS41-203ENST00000395969 KRTAP13-1Q8IUC0 172 aa3.37□□□□□ -1.87
VPS41-203ENST00000395969 SPRR4Q96PI1 79 aa3.37□□□□□ -1.87
VPS41-203ENST00000395969 A0A0G2JQZ4 141 aa3.37□□□□□ -1.87
VPS41-203ENST00000395969 A0A1W2PNN7 141 aa3.37□□□□□ -1.87
VPS41-203ENST00000395969 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
VPS41-203ENST00000395969 LINC00208Q96KT6 92 aa3.37□□□□□ -1.87
VPS41-203ENST00000395969 RPL37AP61513 92 aaKnown RBP3.37□□□□□ -1.87
VPS41-203ENST00000395969 PHF5AQ7RTV0 110 aaKnown RBP3.37□□□□□ -1.87
VPS41-203ENST00000395969 LIMD2Q9BT23 127 aa3.37□□□□□ -1.87
VPS41-203ENST00000395969 K7EQZ3 153 aa3.36□□□□□ -1.87
VPS41-203ENST00000395969 HTN3P15516 51 aa3.36□□□□□ -1.87
VPS41-203ENST00000395969 SPANXA2-OT1Q8N9U9 137 aa3.36□□□□□ -1.87
VPS41-203ENST00000395969 Q9BRP9 147 aa3.36□□□□□ -1.87
VPS41-203ENST00000395969 ATP11AUNQ6ZP68 121 aa3.36□□□□□ -1.87
VPS41-203ENST00000395969 Q6ZRX8 168 aa3.36□□□□□ -1.87
VPS41-203ENST00000395969 ADM2Q7Z4H4 148 aa3.36□□□□□ -1.87
VPS41-203ENST00000395969 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
VPS41-203ENST00000395969 A6NN06 94 aa3.35□□□□□ -1.87
VPS41-203ENST00000395969 SPAG11AQ6PDA7 123 aa3.35□□□□□ -1.87
VPS41-203ENST00000395969 Q8NBF4 154 aa3.35□□□□□ -1.87
VPS41-203ENST00000395969 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
VPS41-203ENST00000395969 SRRM2Q9UQ35 2752 aaKnown RBP3.35□□□□□ -1.87
VPS41-203ENST00000395969 SPACA4Q8TDM5 124 aa3.35□□□□□ -1.87
VPS41-203ENST00000395969 C7orf33Q8WU49 177 aa3.35□□□□□ -1.87
VPS41-203ENST00000395969 IGKV2D-24A0A075B6R9 120 aa3.34□□□□□ -1.87
VPS41-203ENST00000395969 LOC101927531A0A1B0GV80 90 aa3.34□□□□□ -1.87
VPS41-203ENST00000395969 LINC00483Q53H64 154 aa3.34□□□□□ -1.87
VPS41-203ENST00000395969 PLAC8Q9NZF1 115 aa3.34□□□□□ -1.87
VPS41-203ENST00000395969 FLG2Q5D862 2391 aaPredicted RBP3.34□□□□□ -1.87
VPS41-203ENST00000395969 C1orf137Q5JT78 98 aa3.34□□□□□ -1.88
VPS41-203ENST00000395969 Q6ZSA8 131 aa3.34□□□□□ -1.88
VPS41-203ENST00000395969 CSMD3Q7Z407 3707 aa3.33□□□□□ -1.88
VPS41-203ENST00000395969 LYSTQ99698 3801 aa3.33□□□□□ -1.88
VPS41-203ENST00000395969 PLECQ15149 4684 aaKnown RBP3.33□□□□□ -1.88
VPS41-203ENST00000395969 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
VPS41-203ENST00000395969 PKD1L1Q8TDX9 2849 aa3.33□□□□□ -1.88
VPS41-203ENST00000395969 H3BPC8 53 aa3.33□□□□□ -1.88
VPS41-203ENST00000395969 CASC10Q5T4H9 136 aa3.33□□□□□ -1.88
VPS41-203ENST00000395969 STARD9Q9P2P6 4700 aa3.32□□□□□ -1.88
VPS41-203ENST00000395969 MP68P56378 58 aa3.32□□□□□ -1.88
VPS41-203ENST00000395969 PCOTHQ58A44 107 aa3.32□□□□□ -1.88
VPS41-203ENST00000395969 C7orf65Q6ZTY9 151 aa3.32□□□□□ -1.88
VPS41-203ENST00000395969 KRTAP29-1A8MX34 341 aaPredicted RBP3.32□□□□□ -1.88
VPS41-203ENST00000395969 NOTCH1P46531 2555 aa3.31□□□□□ -1.88
VPS41-203ENST00000395969 HECTD4Q9Y4D8 3996 aa3.31□□□□□ -1.88
VPS41-203ENST00000395969 A0A087WTM6 91 aa3.31□□□□□ -1.88
VPS41-203ENST00000395969 NKAPP1Q8N9T2 125 aa3.31□□□□□ -1.88
VPS41-203ENST00000395969 CDC42SE1Q9NRR8 79 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms