RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 IGFL1Q6UW32 110 aa8.53□□□□□ -1.04
NPHP4-203ENST00000378169 APLNQ9ULZ1 77 aa8.52□□□□□ -1.05
NPHP4-203ENST00000378169 V9GYY9 64 aa8.52□□□□□ -1.05
NPHP4-203ENST00000378169 A0A087WTM6 91 aa8.51□□□□□ -1.05
NPHP4-203ENST00000378169 Q8NDZ9 215 aa8.51□□□□□ -1.05
NPHP4-203ENST00000378169 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
NPHP4-203ENST00000378169 CSMD2Q7Z408 3487 aa8.49□□□□□ -1.05
NPHP4-203ENST00000378169 IGKV2D-30A0A075B6S6 120 aa8.49□□□□□ -1.05
NPHP4-203ENST00000378169 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
NPHP4-203ENST00000378169 SPINK1P00995 79 aa8.48□□□□□ -1.05
NPHP4-203ENST00000378169 PRR15LQ9BU68 103 aa8.47□□□□□ -1.05
NPHP4-203ENST00000378169 SVIPQ8NHG7 77 aa8.46□□□□□ -1.05
NPHP4-203ENST00000378169 A0A1W2PNM2 257 aa8.46□□□□□ -1.06
NPHP4-203ENST00000378169 LIMD2Q9BT23 127 aa8.46□□□□□ -1.06
NPHP4-203ENST00000378169 PLA2G2DQ9UNK4 145 aa8.46□□□□□ -1.06
NPHP4-203ENST00000378169 TRAV22A0A0B4J277 110 aa8.44□□□□□ -1.06
NPHP4-203ENST00000378169 CNBPP62633 177 aaKnown RBP8.43□□□□□ -1.06
NPHP4-203ENST00000378169 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
NPHP4-203ENST00000378169 A8MWP4 228 aa8.42□□□□□ -1.06
NPHP4-203ENST00000378169 ZNF861PO60384 105 aa8.41□□□□□ -1.06
NPHP4-203ENST00000378169 PSORS1C2Q9UIG4 136 aa8.41□□□□□ -1.06
NPHP4-203ENST00000378169 OBSCN-AS1Q96MR7 158 aa8.4□□□□□ -1.06
NPHP4-203ENST00000378169 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.06
NPHP4-203ENST00000378169 PLA2G1BP04054 148 aaKnown RBP8.4□□□□□ -1.06
NPHP4-203ENST00000378169 LINC01600Q96MT4 127 aa8.39□□□□□ -1.07
NPHP4-203ENST00000378169 C4orf26Q17RF5 130 aa8.38□□□□□ -1.07
NPHP4-203ENST00000378169 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
NPHP4-203ENST00000378169 LINC00313P59037 77 aa8.37□□□□□ -1.07
NPHP4-203ENST00000378169 PRR15Q8IV56 129 aa8.37□□□□□ -1.07
NPHP4-203ENST00000378169 IGLV5-48A0A075B6I7 105 aa8.37□□□□□ -1.07
NPHP4-203ENST00000378169 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
NPHP4-203ENST00000378169 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
NPHP4-203ENST00000378169 KRTAP1-5Q9BYS1 174 aa8.35□□□□□ -1.07
NPHP4-203ENST00000378169 VWFP04275 2813 aa8.34□□□□□ -1.07
NPHP4-203ENST00000378169 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
NPHP4-203ENST00000378169 IGLV5-37A0A075B6J1 123 aa8.34□□□□□ -1.07
NPHP4-203ENST00000378169 TNP2Q05952 138 aa8.34□□□□□ -1.07
NPHP4-203ENST00000378169 NBPF19A0A087WUL8 3843 aa8.34□□□□□ -1.07
NPHP4-203ENST00000378169 KLKP1Q107X0 134 aa8.33□□□□□ -1.08
NPHP4-203ENST00000378169 SPRR4Q96PI1 79 aa8.32□□□□□ -1.08
NPHP4-203ENST00000378169 MRPL34Q9BQ48 92 aaKnown RBP8.32□□□□□ -1.08
NPHP4-203ENST00000378169 SPAG11AQ6PDA7 123 aa8.32□□□□□ -1.08
NPHP4-203ENST00000378169 OTOGQ6ZRI0 2925 aa8.32□□□□□ -1.08
NPHP4-203ENST00000378169 PMAIP1Q13794 54 aa8.31□□□□□ -1.08
NPHP4-203ENST00000378169 H7BZZ5 65 aa8.3□□□□□ -1.08
NPHP4-203ENST00000378169 IGLV7-43P04211 117 aa8.3□□□□□ -1.08
NPHP4-203ENST00000378169 KRTAP26-1Q6PEX3 210 aa8.3□□□□□ -1.08
NPHP4-203ENST00000378169 C8orf17Q9NRJ1 99 aa8.3□□□□□ -1.08
NPHP4-203ENST00000378169 FBN1P35555 2871 aaKnown RBP8.3□□□□□ -1.08
NPHP4-203ENST00000378169 Q96NJ1 140 aa8.29□□□□□ -1.08
NPHP4-203ENST00000378169 H3BPC8 53 aa8.29□□□□□ -1.08
NPHP4-203ENST00000378169 DSCR10P59022 87 aa8.29□□□□□ -1.08
NPHP4-203ENST00000378169 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
NPHP4-203ENST00000378169 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
NPHP4-203ENST00000378169 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
NPHP4-203ENST00000378169 VPS13CQ709C8 3753 aa8.28□□□□□ -1.08
NPHP4-203ENST00000378169 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.08
NPHP4-203ENST00000378169 K7ERS5 55 aa8.27□□□□□ -1.09
NPHP4-203ENST00000378169 ZFHX3Q15911 3703 aa8.27□□□□□ -1.09
NPHP4-203ENST00000378169 A0A1B0GVX0 72 aa8.26□□□□□ -1.09
NPHP4-203ENST00000378169 ACYP2P14621 99 aa8.24□□□□□ -1.09
NPHP4-203ENST00000378169 TENM3Q9P273 2699 aa8.23□□□□□ -1.09
NPHP4-203ENST00000378169 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
NPHP4-203ENST00000378169 SPRR1AP35321 89 aa8.23□□□□□ -1.09
NPHP4-203ENST00000378169 LOC101927531A0A1B0GV80 90 aa8.21□□□□□ -1.1
NPHP4-203ENST00000378169 C8orf87E5RJ46 101 aa8.21□□□□□ -1.1
NPHP4-203ENST00000378169 PDZD2O15018 2839 aa8.2□□□□□ -1.1
NPHP4-203ENST00000378169 A0A1B0GU69 56 aa8.19□□□□□ -1.1
NPHP4-203ENST00000378169 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
NPHP4-203ENST00000378169 OCR1Q9BZK8 76 aa8.18□□□□□ -1.1
NPHP4-203ENST00000378169 IGLV8-61A0A075B6I0 122 aa8.18□□□□□ -1.1
NPHP4-203ENST00000378169 A8MUN3 132 aa8.18□□□□□ -1.1
NPHP4-203ENST00000378169 COA5Q86WW8 74 aa8.17□□□□□ -1.1
NPHP4-203ENST00000378169 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
NPHP4-203ENST00000378169 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
NPHP4-203ENST00000378169 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
NPHP4-203ENST00000378169 CYSTM1Q9H1C7 97 aa8.14□□□□□ -1.11
NPHP4-203ENST00000378169 PKD1L1Q8TDX9 2849 aa8.13□□□□□ -1.11
NPHP4-203ENST00000378169 PANO1I0J062 215 aa8.11□□□□□ -1.11
NPHP4-203ENST00000378169 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
NPHP4-203ENST00000378169 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
NPHP4-203ENST00000378169 LINC00336Q6ZUF6 198 aa8.07□□□□□ -1.12
NPHP4-203ENST00000378169 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
NPHP4-203ENST00000378169 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
NPHP4-203ENST00000378169 ZNF469Q96JG9 3925 aaPredicted RBP8.03□□□□□ -1.12
NPHP4-203ENST00000378169 SPRR1BP22528 89 aa8.02□□□□□ -1.13
NPHP4-203ENST00000378169 KRTAP10-2P60368 255 aa8.02□□□□□ -1.13
NPHP4-203ENST00000378169 MMP24-AS1A0A0U1RRL7 71 aa8.01□□□□□ -1.13
NPHP4-203ENST00000378169 LINC00472Q9H8W2 130 aa8.01□□□□□ -1.13
NPHP4-203ENST00000378169 Q8N1X5 172 aa7.99□□□□□ -1.13
NPHP4-203ENST00000378169 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
NPHP4-203ENST00000378169 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
NPHP4-203ENST00000378169 TENM2Q9NT68 2774 aa7.96□□□□□ -1.13
NPHP4-203ENST00000378169 KRTAP10-1P60331 282 aa7.96□□□□□ -1.13
NPHP4-203ENST00000378169 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.14
NPHP4-203ENST00000378169 CD164Q04900 197 aa7.95□□□□□ -1.14
NPHP4-203ENST00000378169 J3QL48 77 aa7.94□□□□□ -1.14
NPHP4-203ENST00000378169 TRRAPQ9Y4A5 3859 aa7.94□□□□□ -1.14
NPHP4-203ENST00000378169 Q6ZR54 194 aa7.92□□□□□ -1.14
NPHP4-203ENST00000378169 CYP4F30PQ9H0H9 118 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms