RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 NDUFC1O43677 76 aa8.13□□□□□ -1.11
USP11-204ENST00000377107 TNP2Q05952 138 aa8.12□□□□□ -1.11
USP11-204ENST00000377107 MDFIQ99750 246 aa8.12□□□□□ -1.11
USP11-204ENST00000377107 Q5XG85 94 aa8.12□□□□□ -1.11
USP11-204ENST00000377107 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
USP11-204ENST00000377107 B9D2Q9BPU9 175 aa8.1□□□□□ -1.11
USP11-204ENST00000377107 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
USP11-204ENST00000377107 PANO1I0J062 215 aa8.09□□□□□ -1.11
USP11-204ENST00000377107 APLNQ9ULZ1 77 aa8.09□□□□□ -1.11
USP11-204ENST00000377107 LYSTQ99698 3801 aa8.09□□□□□ -1.11
USP11-204ENST00000377107 A0A0U1RQV1 116 aa8.08□□□□□ -1.12
USP11-204ENST00000377107 SMIM26A0A096LP01 95 aa8.08□□□□□ -1.12
USP11-204ENST00000377107 LINC00208Q96KT6 92 aa8.08□□□□□ -1.12
USP11-204ENST00000377107 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
USP11-204ENST00000377107 DNAH10Q8IVF4 4471 aa8.07□□□□□ -1.12
USP11-204ENST00000377107 FAM229BQ4G0N7 80 aa8.07□□□□□ -1.12
USP11-204ENST00000377107 TGP01266 2768 aa8.07□□□□□ -1.12
USP11-204ENST00000377107 ANAPC11Q9NYG5 84 aa8.07□□□□□ -1.12
USP11-204ENST00000377107 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
USP11-204ENST00000377107 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
USP11-204ENST00000377107 MP68P56378 58 aa8.05□□□□□ -1.12
USP11-204ENST00000377107 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
USP11-204ENST00000377107 HUWE1Q7Z6Z7 4374 aaKnown RBP8.04□□□□□ -1.12
USP11-204ENST00000377107 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
USP11-204ENST00000377107 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
USP11-204ENST00000377107 NDUFS5O43920 106 aa8.03□□□□□ -1.12
USP11-204ENST00000377107 CASC2Q6XLA1 102 aa8.03□□□□□ -1.12
USP11-204ENST00000377107 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
USP11-204ENST00000377107 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
USP11-204ENST00000377107 A0A1B0GW54 56 aa8.01□□□□□ -1.13
USP11-204ENST00000377107 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
USP11-204ENST00000377107 CMYA5Q8N3K9 4069 aa8□□□□□ -1.13
USP11-204ENST00000377107 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
USP11-204ENST00000377107 NDUFB1O75438 58 aa7.98□□□□□ -1.13
USP11-204ENST00000377107 H0Y9P7 68 aa7.98□□□□□ -1.13
USP11-204ENST00000377107 NUPR2A6NF83 97 aa7.97□□□□□ -1.13
USP11-204ENST00000377107 PKIGQ9Y2B9 76 aa7.97□□□□□ -1.13
USP11-204ENST00000377107 PSPHP1O15172 72 aa7.97□□□□□ -1.13
USP11-204ENST00000377107 C1orf64Q8NEQ6 169 aa7.96□□□□□ -1.14
USP11-204ENST00000377107 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
USP11-204ENST00000377107 MOBPQ13875 183 aa7.96□□□□□ -1.14
USP11-204ENST00000377107 IGHV6-1A0A0B4J1U7 121 aa7.95□□□□□ -1.14
USP11-204ENST00000377107 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
USP11-204ENST00000377107 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
USP11-204ENST00000377107 LY6G6CO95867 125 aa7.94□□□□□ -1.14
USP11-204ENST00000377107 RTL8CO15255 209 aa7.92□□□□□ -1.14
USP11-204ENST00000377107 A8MWP4 228 aa7.92□□□□□ -1.14
USP11-204ENST00000377107 A0A087WTM6 91 aa7.91□□□□□ -1.14
USP11-204ENST00000377107 PSORS1C2Q9UIG4 136 aa7.9□□□□□ -1.14
USP11-204ENST00000377107 IGLV5-52A0A0A0MRZ9 124 aa7.89□□□□□ -1.15
USP11-204ENST00000377107 hDV103S1A0JD37 113 aa7.89□□□□□ -1.15
USP11-204ENST00000377107 CIRBP-AS1Q8TBR5 109 aa7.89□□□□□ -1.15
USP11-204ENST00000377107 IGLV8-61A0A075B6I0 122 aa7.89□□□□□ -1.15
USP11-204ENST00000377107 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
USP11-204ENST00000377107 LINC00472Q9H8W2 130 aa7.88□□□□□ -1.15
USP11-204ENST00000377107 Q6ZRN7 208 aaPredicted RBP7.87□□□□□ -1.15
USP11-204ENST00000377107 TRAV22A0A0B4J277 110 aa7.86□□□□□ -1.15
USP11-204ENST00000377107 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
USP11-204ENST00000377107 DNAH7Q8WXX0 4024 aa7.85□□□□□ -1.15
USP11-204ENST00000377107 ZCCHC13Q8WW36 166 aaKnown RBP7.84□□□□□ -1.15
USP11-204ENST00000377107 DNAH3Q8TD57 4116 aa7.84□□□□□ -1.15
USP11-204ENST00000377107 FBN3Q75N90 2809 aa7.84□□□□□ -1.16
USP11-204ENST00000377107 SPRR1BP22528 89 aa7.83□□□□□ -1.16
USP11-204ENST00000377107 PRO0628Q9UI54 55 aa7.83□□□□□ -1.16
USP11-204ENST00000377107 KRTAP29-1A8MX34 341 aaPredicted RBP7.83□□□□□ -1.16
USP11-204ENST00000377107 RETNLBQ9BQ08 111 aa7.83□□□□□ -1.16
USP11-204ENST00000377107 C1orf134Q5TEV5 83 aa7.82□□□□□ -1.16
USP11-204ENST00000377107 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
USP11-204ENST00000377107 MMP24-AS1A0A0U1RRL7 71 aa7.81□□□□□ -1.16
USP11-204ENST00000377107 PLECQ15149 4684 aaKnown RBP7.8□□□□□ -1.16
USP11-204ENST00000377107 LCE6AA0A183 80 aa7.8□□□□□ -1.16
USP11-204ENST00000377107 A8MUN3 132 aa7.8□□□□□ -1.16
USP11-204ENST00000377107 ZNF706Q9Y5V0 76 aaPredicted RBP7.8□□□□□ -1.16
USP11-204ENST00000377107 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
USP11-204ENST00000377107 ZNF861PO60384 105 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 A0A087X002 238 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
USP11-204ENST00000377107 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
USP11-204ENST00000377107 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
USP11-204ENST00000377107 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
USP11-204ENST00000377107 Q96NJ1 140 aa7.72□□□□□ -1.17
USP11-204ENST00000377107 CYP4F30PQ9H0H9 118 aa7.71□□□□□ -1.18
USP11-204ENST00000377107 SPAG11AQ6PDA7 123 aa7.7□□□□□ -1.18
USP11-204ENST00000377107 COA5Q86WW8 74 aa7.7□□□□□ -1.18
USP11-204ENST00000377107 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
USP11-204ENST00000377107 IGLV7-43P04211 117 aa7.7□□□□□ -1.18
USP11-204ENST00000377107 SPTSSBQ8NFR3 76 aa7.7□□□□□ -1.18
USP11-204ENST00000377107 KRTAP10-2P60368 255 aa7.69□□□□□ -1.18
USP11-204ENST00000377107 PLAC8Q9NZF1 115 aa7.69□□□□□ -1.18
USP11-204ENST00000377107 CD164Q04900 197 aa7.69□□□□□ -1.18
USP11-204ENST00000377107 STARD9Q9P2P6 4700 aa7.68□□□□□ -1.18
USP11-204ENST00000377107 H3BPC8 53 aa7.68□□□□□ -1.18
USP11-204ENST00000377107 A8MU10 97 aa7.67□□□□□ -1.18
USP11-204ENST00000377107 C1orf195Q5TG92 126 aa7.67□□□□□ -1.18
USP11-204ENST00000377107 Q6ZR54 194 aa7.67□□□□□ -1.18
USP11-204ENST00000377107 PRKDCP78527 4128 aaKnown RBP7.66□□□□□ -1.18
USP11-204ENST00000377107 Q1T7F1 81 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms