RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 NDUFC1O43677 76 aa8.13□□□□□ -1.11
USP11-204ENST00000377107 TNP2Q05952 138 aa8.12□□□□□ -1.11
USP11-204ENST00000377107 MDFIQ99750 246 aa8.12□□□□□ -1.11
USP11-204ENST00000377107 Q5XG85 94 aa8.12□□□□□ -1.11
USP11-204ENST00000377107 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
USP11-204ENST00000377107 B9D2Q9BPU9 175 aa8.1□□□□□ -1.11
USP11-204ENST00000377107 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
USP11-204ENST00000377107 PANO1I0J062 215 aa8.09□□□□□ -1.11
USP11-204ENST00000377107 APLNQ9ULZ1 77 aa8.09□□□□□ -1.11
USP11-204ENST00000377107 LYSTQ99698 3801 aa8.09□□□□□ -1.11
USP11-204ENST00000377107 A0A0U1RQV1 116 aa8.08□□□□□ -1.12
USP11-204ENST00000377107 SMIM26A0A096LP01 95 aa8.08□□□□□ -1.12
USP11-204ENST00000377107 LINC00208Q96KT6 92 aa8.08□□□□□ -1.12
USP11-204ENST00000377107 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
USP11-204ENST00000377107 DNAH10Q8IVF4 4471 aa8.07□□□□□ -1.12
USP11-204ENST00000377107 FAM229BQ4G0N7 80 aa8.07□□□□□ -1.12
USP11-204ENST00000377107 TGP01266 2768 aa8.07□□□□□ -1.12
USP11-204ENST00000377107 ANAPC11Q9NYG5 84 aa8.07□□□□□ -1.12
USP11-204ENST00000377107 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
USP11-204ENST00000377107 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
USP11-204ENST00000377107 MP68P56378 58 aa8.05□□□□□ -1.12
USP11-204ENST00000377107 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
USP11-204ENST00000377107 HUWE1Q7Z6Z7 4374 aaKnown RBP8.04□□□□□ -1.12
USP11-204ENST00000377107 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
USP11-204ENST00000377107 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
USP11-204ENST00000377107 NDUFS5O43920 106 aa8.03□□□□□ -1.12
USP11-204ENST00000377107 CASC2Q6XLA1 102 aa8.03□□□□□ -1.12
USP11-204ENST00000377107 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
USP11-204ENST00000377107 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
USP11-204ENST00000377107 A0A1B0GW54 56 aa8.01□□□□□ -1.13
USP11-204ENST00000377107 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
USP11-204ENST00000377107 CMYA5Q8N3K9 4069 aa8□□□□□ -1.13
USP11-204ENST00000377107 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
USP11-204ENST00000377107 NDUFB1O75438 58 aa7.98□□□□□ -1.13
USP11-204ENST00000377107 H0Y9P7 68 aa7.98□□□□□ -1.13
USP11-204ENST00000377107 NUPR2A6NF83 97 aa7.97□□□□□ -1.13
USP11-204ENST00000377107 PKIGQ9Y2B9 76 aa7.97□□□□□ -1.13
USP11-204ENST00000377107 PSPHP1O15172 72 aa7.97□□□□□ -1.13
USP11-204ENST00000377107 C1orf64Q8NEQ6 169 aa7.96□□□□□ -1.14
USP11-204ENST00000377107 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
USP11-204ENST00000377107 MOBPQ13875 183 aa7.96□□□□□ -1.14
USP11-204ENST00000377107 IGHV6-1A0A0B4J1U7 121 aa7.95□□□□□ -1.14
USP11-204ENST00000377107 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
USP11-204ENST00000377107 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
USP11-204ENST00000377107 LY6G6CO95867 125 aa7.94□□□□□ -1.14
USP11-204ENST00000377107 RTL8CO15255 209 aa7.92□□□□□ -1.14
USP11-204ENST00000377107 A8MWP4 228 aa7.92□□□□□ -1.14
USP11-204ENST00000377107 A0A087WTM6 91 aa7.91□□□□□ -1.14
USP11-204ENST00000377107 PSORS1C2Q9UIG4 136 aa7.9□□□□□ -1.14
USP11-204ENST00000377107 IGLV5-52A0A0A0MRZ9 124 aa7.89□□□□□ -1.15
USP11-204ENST00000377107 hDV103S1A0JD37 113 aa7.89□□□□□ -1.15
USP11-204ENST00000377107 CIRBP-AS1Q8TBR5 109 aa7.89□□□□□ -1.15
USP11-204ENST00000377107 IGLV8-61A0A075B6I0 122 aa7.89□□□□□ -1.15
USP11-204ENST00000377107 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
USP11-204ENST00000377107 LINC00472Q9H8W2 130 aa7.88□□□□□ -1.15
USP11-204ENST00000377107 Q6ZRN7 208 aaPredicted RBP7.87□□□□□ -1.15
USP11-204ENST00000377107 TRAV22A0A0B4J277 110 aa7.86□□□□□ -1.15
USP11-204ENST00000377107 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
USP11-204ENST00000377107 DNAH7Q8WXX0 4024 aa7.85□□□□□ -1.15
USP11-204ENST00000377107 ZCCHC13Q8WW36 166 aaKnown RBP7.84□□□□□ -1.15
USP11-204ENST00000377107 DNAH3Q8TD57 4116 aa7.84□□□□□ -1.15
USP11-204ENST00000377107 FBN3Q75N90 2809 aa7.84□□□□□ -1.16
USP11-204ENST00000377107 SPRR1BP22528 89 aa7.83□□□□□ -1.16
USP11-204ENST00000377107 PRO0628Q9UI54 55 aa7.83□□□□□ -1.16
USP11-204ENST00000377107 KRTAP29-1A8MX34 341 aaPredicted RBP7.83□□□□□ -1.16
USP11-204ENST00000377107 RETNLBQ9BQ08 111 aa7.83□□□□□ -1.16
USP11-204ENST00000377107 C1orf134Q5TEV5 83 aa7.82□□□□□ -1.16
USP11-204ENST00000377107 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
USP11-204ENST00000377107 MMP24-AS1A0A0U1RRL7 71 aa7.81□□□□□ -1.16
USP11-204ENST00000377107 PLECQ15149 4684 aaKnown RBP7.8□□□□□ -1.16
USP11-204ENST00000377107 LCE6AA0A183 80 aa7.8□□□□□ -1.16
USP11-204ENST00000377107 A8MUN3 132 aa7.8□□□□□ -1.16
USP11-204ENST00000377107 ZNF706Q9Y5V0 76 aaPredicted RBP7.8□□□□□ -1.16
USP11-204ENST00000377107 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
USP11-204ENST00000377107 ZNF861PO60384 105 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 A0A087X002 238 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
USP11-204ENST00000377107 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
USP11-204ENST00000377107 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
USP11-204ENST00000377107 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
USP11-204ENST00000377107 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
USP11-204ENST00000377107 Q96NJ1 140 aa7.72□□□□□ -1.17
USP11-204ENST00000377107 CYP4F30PQ9H0H9 118 aa7.71□□□□□ -1.18
USP11-204ENST00000377107 SPAG11AQ6PDA7 123 aa7.7□□□□□ -1.18
USP11-204ENST00000377107 COA5Q86WW8 74 aa7.7□□□□□ -1.18
USP11-204ENST00000377107 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
USP11-204ENST00000377107 IGLV7-43P04211 117 aa7.7□□□□□ -1.18
USP11-204ENST00000377107 SPTSSBQ8NFR3 76 aa7.7□□□□□ -1.18
USP11-204ENST00000377107 KRTAP10-2P60368 255 aa7.69□□□□□ -1.18
USP11-204ENST00000377107 PLAC8Q9NZF1 115 aa7.69□□□□□ -1.18
USP11-204ENST00000377107 CD164Q04900 197 aa7.69□□□□□ -1.18
USP11-204ENST00000377107 STARD9Q9P2P6 4700 aa7.68□□□□□ -1.18
USP11-204ENST00000377107 H3BPC8 53 aa7.68□□□□□ -1.18
USP11-204ENST00000377107 A8MU10 97 aa7.67□□□□□ -1.18
USP11-204ENST00000377107 C1orf195Q5TG92 126 aa7.67□□□□□ -1.18
USP11-204ENST00000377107 Q6ZR54 194 aa7.67□□□□□ -1.18
USP11-204ENST00000377107 PRKDCP78527 4128 aaKnown RBP7.66□□□□□ -1.18
USP11-204ENST00000377107 Q1T7F1 81 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms