RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 LINC00612Q8N6U2 182 aa3.08□□□□□ -1.92
ECHDC1-204ENST00000368292 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
ECHDC1-204ENST00000368292 SNURFQ9Y675 71 aa3.08□□□□□ -1.92
ECHDC1-204ENST00000368292 VPS13BQ7Z7G8 4022 aa3.08□□□□□ -1.92
ECHDC1-204ENST00000368292 LRP2P98164 4655 aa3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 TRBV30A0A0K0K1B3 111 aa3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 WISP3O95389 354 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 ERHP84090 104 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 Q5W150 140 aa3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 KRTAP26-1Q6PEX3 210 aa3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 TXNDC17Q9BRA2 123 aa3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 ORMDL1Q9P0S3 153 aa3.07□□□□□ -1.92
ECHDC1-204ENST00000368292 A0A096LNJ9 63 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 IGHV3-30P01768 117 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 IGHV3-30-5P0DP03 117 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 FCER1GP30273 86 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 CAV3P56539 151 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 C1orf137Q5JT78 98 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 Q5VSD8 79 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 ZNF563Q8TA94 476 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 DMAC1Q96GE9 116 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 KIF25-AS1Q9Y6Z4 181 aa3.06□□□□□ -1.92
ECHDC1-204ENST00000368292 A0A087WVE0 104 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 A0A0J9YX75 114 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 A0A0J9YY99 117 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 PPP1R17O96001 155 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 IFI6P09912 130 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 SNRPGP62308 76 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 SPAG11BQ08648 103 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 KLK12Q9UKR0 248 aa3.05□□□□□ -1.92
ECHDC1-204ENST00000368292 LRP1Q07954 4544 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 TRBV6-6A0A0A6YYG2 114 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 TRAV1-2A0A0B4J238 106 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 IGKV3D-7A0A0C4DH55 119 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 TRBV6-5A0A0K0K1A5 114 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 DNAL4O96015 105 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 FAM74A4Q5TZK3 123 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 LINC00322Q6ZN03 302 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 Q86TA4 180 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 LYPD1Q8N2G4 141 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 ST20-AS1Q8NBB2 130 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 MRPL36Q9P0J6 103 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 LHFPL6Q9Y693 200 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 PKHD1L1Q86WI1 4243 aa3.04□□□□□ -1.92
ECHDC1-204ENST00000368292 H3BSH0 61 aa3.03□□□□□ -1.92
ECHDC1-204ENST00000368292 UBALD1Q8TB05 177 aa3.03□□□□□ -1.92
ECHDC1-204ENST00000368292 AMELXQ99217 191 aa3.03□□□□□ -1.92
ECHDC1-204ENST00000368292 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
ECHDC1-204ENST00000368292 M0R2N4 97 aa3.02□□□□□ -1.93
ECHDC1-204ENST00000368292 Q9BRP9 147 aa3.02□□□□□ -1.93
ECHDC1-204ENST00000368292 A0A1B0GUT8 65 aa3.01□□□□□ -1.93
ECHDC1-204ENST00000368292 SERF2P84101 59 aa3.01□□□□□ -1.93
ECHDC1-204ENST00000368292 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
ECHDC1-204ENST00000368292 LELP1Q5T871 98 aa3.01□□□□□ -1.93
ECHDC1-204ENST00000368292 C9orf163Q8N9P6 203 aa3□□□□□ -1.93
ECHDC1-204ENST00000368292 APLNQ9ULZ1 77 aa3□□□□□ -1.93
ECHDC1-204ENST00000368292 FSIP2Q5CZC0 6907 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 IGKV3-7A0A075B6H7 116 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 SMIM27A0A1W2PRY6 76 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 F8VRH5 84 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 M0R1W7 72 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 M0R3E3 92 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 IGKV1-17P01599 117 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 NDPQ00604 133 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 PDE6HQ13956 83 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 RPS27LQ71UM5 84 aaKnown RBP2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 KAAG1Q9UBP8 84 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 V9GYV3 84 aa2.99□□□□□ -1.93
ECHDC1-204ENST00000368292 FAT3Q8TDW7 4589 aa2.98□□□□□ -1.93
ECHDC1-204ENST00000368292 CNBPP62633 177 aaKnown RBP2.98□□□□□ -1.93
ECHDC1-204ENST00000368292 NREPQ16612 68 aa2.98□□□□□ -1.93
ECHDC1-204ENST00000368292 WFDC6Q9BQY6 131 aa2.98□□□□□ -1.93
ECHDC1-204ENST00000368292 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
ECHDC1-204ENST00000368292 R4GMQ9 66 aa2.98□□□□□ -1.93
ECHDC1-204ENST00000368292 LRCOL1A6NCL2 159 aa2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 K7EMI3 77 aa2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 NDUFB1O75438 58 aa2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 KRTAP1-4P0C5Y4 121 aa2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 TMEM263Q8WUH6 116 aaKnown RBP2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 C4orf3Q8WVX3 66 aa2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 HIGD2AQ9BW72 106 aa2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 WFDC10AQ9H1F0 79 aa2.97□□□□□ -1.93
ECHDC1-204ENST00000368292 CTXND1A0A1B0GTU2 59 aa2.96□□□□□ -1.94
ECHDC1-204ENST00000368292 SMR3BP02814 79 aaPredicted RBP2.96□□□□□ -1.94
ECHDC1-204ENST00000368292 CCL3L1P16619 93 aa2.96□□□□□ -1.94
ECHDC1-204ENST00000368292 PLNP26678 52 aa2.96□□□□□ -1.94
ECHDC1-204ENST00000368292 COX7B2Q8TF08 81 aa2.96□□□□□ -1.94
ECHDC1-204ENST00000368292 TNXBP22105 4242 aa2.95□□□□□ -1.94
ECHDC1-204ENST00000368292 M0R135 149 aa2.95□□□□□ -1.94
ECHDC1-204ENST00000368292 CCL18P55774 89 aa2.95□□□□□ -1.94
ECHDC1-204ENST00000368292 LINC00846Q9NV44 126 aa2.95□□□□□ -1.94
ECHDC1-204ENST00000368292 PLAC8Q9NZF1 115 aa2.95□□□□□ -1.94
ECHDC1-204ENST00000368292 IGLV4-69A0A075B6H9 119 aa2.94□□□□□ -1.94
ECHDC1-204ENST00000368292 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
ECHDC1-204ENST00000368292 UBL5Q9BZL1 73 aa2.94□□□□□ -1.94
ECHDC1-204ENST00000368292 TRAV21A0A0B4J279 112 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms