RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 LMO7Q8WWI1 1683 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 H0YAA0 97 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 SPINK6Q6UWN8 80 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 DEFB105AQ8NG35 78 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 TTTY10Q9BZA0 68 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 KAAG1Q9UBP8 84 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 KNL1Q8NG31 2342 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 CHD9Q3L8U1 2897 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 POLQO75417 2590 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 GCC2Q8IWJ2 1684 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 PLCE1Q9P212 2302 aa0.79□□□□□ -2.28
CFHR3-201ENST00000367425 SYNE2Q8WXH0 6885 aaKnown RBP0.79□□□□□ -2.28
CFHR3-201ENST00000367425 H1FX-AS1Q4G0G2 97 aa0.78□□□□□ -2.28
CFHR3-201ENST00000367425 LELP1Q5T871 98 aa0.78□□□□□ -2.28
CFHR3-201ENST00000367425 RPS27LQ71UM5 84 aaKnown RBP0.78□□□□□ -2.28
CFHR3-201ENST00000367425 DSPP15924 2871 aaKnown RBP0.78□□□□□ -2.28
CFHR3-201ENST00000367425 C4BP0C0L5 1744 aa0.78□□□□□ -2.29
CFHR3-201ENST00000367425 DEFB130BP0DP73 79 aa0.78□□□□□ -2.29
CFHR3-201ENST00000367425 DEFB130AP0DP74 79 aa0.78□□□□□ -2.29
CFHR3-201ENST00000367425 RPL39P62891 51 aaKnown RBP0.78□□□□□ -2.29
CFHR3-201ENST00000367425 TNRC6CQ9HCJ0 1690 aaKnown RBP0.78□□□□□ -2.29
CFHR3-201ENST00000367425 PTPRQQ9UMZ3 2332 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 SPTBN2O15020 2390 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 SPTBN1Q01082 2364 aaKnown RBP0.77□□□□□ -2.29
CFHR3-201ENST00000367425 H3BSH0 61 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 SPRR1AP35321 89 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 POLR2KP53803 58 aaKnown RBP0.77□□□□□ -2.29
CFHR3-201ENST00000367425 KRTAP2-4Q9BYR9 128 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 TPRP12270 2363 aaKnown RBP0.77□□□□□ -2.29
CFHR3-201ENST00000367425 CELSR2Q9HCU4 2923 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 FRAS1Q86XX4 4008 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 PKDREJQ9NTG1 2253 aa0.77□□□□□ -2.29
CFHR3-201ENST00000367425 BDP1A6H8Y1 2624 aa0.76□□□□□ -2.29
CFHR3-201ENST00000367425 H3BUA1 57 aa0.76□□□□□ -2.29
CFHR3-201ENST00000367425 RPS27P42677 84 aaKnown RBP0.76□□□□□ -2.29
CFHR3-201ENST00000367425 C2CD3Q4AC94 2353 aa0.76□□□□□ -2.29
CFHR3-201ENST00000367425 PTPRZ1P23471 2315 aaPredicted RBP0.76□□□□□ -2.29
CFHR3-201ENST00000367425 IGLV5-48A0A075B6I7 105 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 PRLHP81277 87 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 WT1-ASQ06250 92 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 Q5VSD8 79 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 RPL39LQ96EH5 51 aaKnown RBP0.75□□□□□ -2.29
CFHR3-201ENST00000367425 ZNF292O60281 2723 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 SPRR1BP22528 89 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 DEFB131AP59861 70 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 KLK9Q2XQG4 91 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 LEAP2Q969E1 77 aa0.75□□□□□ -2.29
CFHR3-201ENST00000367425 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
CFHR3-201ENST00000367425 ALMS1Q8TCU4 4167 aa0.74□□□□□ -2.29
CFHR3-201ENST00000367425 ABCA12Q86UK0 2595 aa0.74□□□□□ -2.29
CFHR3-201ENST00000367425 LINC01590Q5TEZ4 76 aa0.74□□□□□ -2.29
CFHR3-201ENST00000367425 USF3Q68DE3 2245 aa0.74□□□□□ -2.29
CFHR3-201ENST00000367425 A0A0C4DFX4 3053 aa0.74□□□□□ -2.29
CFHR3-201ENST00000367425 ANK2Q01484 3957 aa0.73□□□□□ -2.29
CFHR3-201ENST00000367425 KMT2DO14686 5537 aa0.73□□□□□ -2.29
CFHR3-201ENST00000367425 SMR3AQ99954 134 aa0.73□□□□□ -2.29
CFHR3-201ENST00000367425 IGF2RP11717 2491 aa0.73□□□□□ -2.29
CFHR3-201ENST00000367425 GVINP1Q7Z2Y8 2422 aa0.73□□□□□ -2.29
CFHR3-201ENST00000367425 TOMM7Q9P0U1 55 aa0.72□□□□□ -2.29
CFHR3-201ENST00000367425 PRCDQ00LT1 54 aa0.71□□□□□ -2.3
CFHR3-201ENST00000367425 DEFB106AQ8N104 65 aa0.71□□□□□ -2.3
CFHR3-201ENST00000367425 ABCA2Q9BZC7 2435 aa0.71□□□□□ -2.3
CFHR3-201ENST00000367425 F8P00451 2351 aa0.71□□□□□ -2.3
CFHR3-201ENST00000367425 SRRM2Q9UQ35 2752 aaKnown RBP0.71□□□□□ -2.3
CFHR3-201ENST00000367425 MMP24-AS1A0A0U1RRL7 71 aa0.71□□□□□ -2.3
CFHR3-201ENST00000367425 SPINK1P00995 79 aa0.71□□□□□ -2.3
CFHR3-201ENST00000367425 DEFB109BQ30KR1 87 aa0.71□□□□□ -2.3
CFHR3-201ENST00000367425 PCNX1Q96RV3 2341 aa0.7□□□□□ -2.3
CFHR3-201ENST00000367425 HECTD1Q9ULT8 2610 aa0.7□□□□□ -2.3
CFHR3-201ENST00000367425 PRRC2CQ9Y520 2896 aaKnown RBP0.7□□□□□ -2.3
CFHR3-201ENST00000367425 A8MTW9 85 aa0.7□□□□□ -2.3
CFHR3-201ENST00000367425 M0QY20 66 aa0.7□□□□□ -2.3
CFHR3-201ENST00000367425 S4R3F8 94 aa0.7□□□□□ -2.3
CFHR3-201ENST00000367425 AKAP13Q12802 2813 aa0.69□□□□□ -2.3
CFHR3-201ENST00000367425 DEFB104AQ8WTQ1 72 aa0.69□□□□□ -2.3
CFHR3-201ENST00000367425 NOP10Q9NPE3 64 aaKnown RBP0.69□□□□□ -2.3
CFHR3-201ENST00000367425 PIEZO1Q92508 2521 aa0.69□□□□□ -2.3
CFHR3-201ENST00000367425 CHD7Q9P2D1 2997 aa0.69□□□□□ -2.3
CFHR3-201ENST00000367425 CSPG4Q6UVK1 2322 aa0.68□□□□□ -2.3
CFHR3-201ENST00000367425 ATRQ13535 2644 aa0.68□□□□□ -2.3
CFHR3-201ENST00000367425 CSMD3Q7Z407 3707 aa0.68□□□□□ -2.3
CFHR3-201ENST00000367425 PKD1L2Q7Z442 2459 aa0.68□□□□□ -2.3
CFHR3-201ENST00000367425 AKAP6Q13023 2319 aa0.67□□□□□ -2.3
CFHR3-201ENST00000367425 FSIP2Q5CZC0 6907 aa0.67□□□□□ -2.3
CFHR3-201ENST00000367425 CLPSL2Q6UWE3 100 aa0.67□□□□□ -2.3
CFHR3-201ENST00000367425 CREBBPQ92793 2442 aa0.66□□□□□ -2.3
CFHR3-201ENST00000367425 SPTA1P02549 2419 aa0.66□□□□□ -2.3
CFHR3-201ENST00000367425 H0YGG7 62 aa0.66□□□□□ -2.3
CFHR3-201ENST00000367425 MGAQ8IWI9 3026 aa0.66□□□□□ -2.3
CFHR3-201ENST00000367425 CEP290O15078 2479 aa0.65□□□□□ -2.3
CFHR3-201ENST00000367425 CRYBG3Q68DQ2 2970 aa0.65□□□□□ -2.31
CFHR3-201ENST00000367425 UBR5O95071 2799 aaPredicted RBP0.64□□□□□ -2.31
CFHR3-201ENST00000367425 CHD6Q8TD26 2715 aa0.64□□□□□ -2.31
CFHR3-201ENST00000367425 OTOGQ6ZRI0 2925 aa0.64□□□□□ -2.31
CFHR3-201ENST00000367425 K7EIM0 57 aa0.64□□□□□ -2.31
CFHR3-201ENST00000367425 TMEM167AQ8TBQ9 72 aa0.64□□□□□ -2.31
CFHR3-201ENST00000367425 VWFP04275 2813 aa0.63□□□□□ -2.31
CFHR3-201ENST00000367425 NBASA2RRP1 2371 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms