RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 SMCPP49901 116 aaPredicted RBP7.75□□□□□ -1.17
TRAF3-201ENST00000347662 PRR26Q8N8Z3 221 aa7.75□□□□□ -1.17
TRAF3-201ENST00000347662 LINC00528Q8N1L1 170 aa7.74□□□□□ -1.17
TRAF3-201ENST00000347662 BOD1L1Q8NFC6 3051 aa7.72□□□□□ -1.17
TRAF3-201ENST00000347662 DMXL2Q8TDJ6 3036 aa7.72□□□□□ -1.17
TRAF3-201ENST00000347662 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
TRAF3-201ENST00000347662 IGLV7-43P04211 117 aa7.72□□□□□ -1.17
TRAF3-201ENST00000347662 IGSF10Q6WRI0 2623 aa7.72□□□□□ -1.17
TRAF3-201ENST00000347662 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.17
TRAF3-201ENST00000347662 UBR5O95071 2799 aaPredicted RBP7.71□□□□□ -1.18
TRAF3-201ENST00000347662 IGLV7-46A0A075B6I9 117 aa7.71□□□□□ -1.18
TRAF3-201ENST00000347662 A0A087WTM6 91 aa7.7□□□□□ -1.18
TRAF3-201ENST00000347662 GCN1Q92616 2671 aaKnown RBP7.7□□□□□ -1.18
TRAF3-201ENST00000347662 TACC2O95359 2948 aa7.68□□□□□ -1.18
TRAF3-201ENST00000347662 A0A1B0GU33 70 aa7.68□□□□□ -1.18
TRAF3-201ENST00000347662 KCNQ1DNQ9H478 68 aa7.68□□□□□ -1.18
TRAF3-201ENST00000347662 SPINK7P58062 85 aa7.67□□□□□ -1.18
TRAF3-201ENST00000347662 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
TRAF3-201ENST00000347662 C9orf163Q8N9P6 203 aa7.66□□□□□ -1.18
TRAF3-201ENST00000347662 C19orf73Q9NVV2 129 aa7.66□□□□□ -1.18
TRAF3-201ENST00000347662 DMBT1Q9UGM3 2413 aaPredicted RBP7.66□□□□□ -1.18
TRAF3-201ENST00000347662 EYSQ5T1H1 3165 aa7.66□□□□□ -1.18
TRAF3-201ENST00000347662 S4R3F8 94 aa7.66□□□□□ -1.18
TRAF3-201ENST00000347662 Q8N377 158 aa7.66□□□□□ -1.18
TRAF3-201ENST00000347662 KRTAP1-1Q07627 177 aa7.65□□□□□ -1.18
TRAF3-201ENST00000347662 CRYBG3Q68DQ2 2970 aa7.65□□□□□ -1.18
TRAF3-201ENST00000347662 LINC01546A6NGU7 62 aa7.65□□□□□ -1.19
TRAF3-201ENST00000347662 ITPR2Q14571 2701 aa7.63□□□□□ -1.19
TRAF3-201ENST00000347662 COL12A1Q99715 3063 aa7.63□□□□□ -1.19
TRAF3-201ENST00000347662 SPEGQ15772 3267 aa7.62□□□□□ -1.19
TRAF3-201ENST00000347662 CFAP47Q6ZTR5 3102 aa7.62□□□□□ -1.19
TRAF3-201ENST00000347662 GIG44P09565 113 aaPredicted RBP7.61□□□□□ -1.19
TRAF3-201ENST00000347662 NBEAL2Q6ZNJ1 2754 aa7.6□□□□□ -1.19
TRAF3-201ENST00000347662 R4GN34 69 aa7.6□□□□□ -1.19
TRAF3-201ENST00000347662 H3BS24 57 aa7.6□□□□□ -1.19
TRAF3-201ENST00000347662 KALRNO60229 2985 aa7.59□□□□□ -1.19
TRAF3-201ENST00000347662 PRO0461Q9UI25 63 aa7.59□□□□□ -1.19
TRAF3-201ENST00000347662 CSAG1Q6PB30 78 aa7.59□□□□□ -1.19
TRAF3-201ENST00000347662 ATMQ13315 3056 aa7.59□□□□□ -1.2
TRAF3-201ENST00000347662 SPRR4Q96PI1 79 aa7.58□□□□□ -1.2
TRAF3-201ENST00000347662 STAB2Q8WWQ8 2551 aa7.57□□□□□ -1.2
TRAF3-201ENST00000347662 LINC00612Q8N6U2 182 aa7.56□□□□□ -1.2
TRAF3-201ENST00000347662 KLK9Q2XQG4 91 aa7.55□□□□□ -1.2
TRAF3-201ENST00000347662 FLNCQ14315 2725 aa7.54□□□□□ -1.2
TRAF3-201ENST00000347662 Q5VSD8 79 aa7.54□□□□□ -1.2
TRAF3-201ENST00000347662 KLKP1Q107X0 134 aa7.54□□□□□ -1.2
TRAF3-201ENST00000347662 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
TRAF3-201ENST00000347662 SPANXA2-OT1Q8N9U9 137 aa7.53□□□□□ -1.2
TRAF3-201ENST00000347662 LITAFQ99732 161 aa7.53□□□□□ -1.2
TRAF3-201ENST00000347662 ADGRG4Q8IZF6 3080 aa7.53□□□□□ -1.2
TRAF3-201ENST00000347662 NSD1Q96L73 2696 aaPredicted RBP7.52□□□□□ -1.2
TRAF3-201ENST00000347662 CASC10Q5T4H9 136 aa7.52□□□□□ -1.21
TRAF3-201ENST00000347662 H7BZZ5 65 aa7.52□□□□□ -1.21
TRAF3-201ENST00000347662 ITPR1Q14643 2758 aa7.51□□□□□ -1.21
TRAF3-201ENST00000347662 LRBAP50851 2863 aa7.49□□□□□ -1.21
TRAF3-201ENST00000347662 PRR34Q9NV39 138 aa7.48□□□□□ -1.21
TRAF3-201ENST00000347662 ASH1LQ9NR48 2969 aaKnown RBP7.48□□□□□ -1.21
TRAF3-201ENST00000347662 TNP2Q05952 138 aa7.47□□□□□ -1.21
TRAF3-201ENST00000347662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
TRAF3-201ENST00000347662 PRAC1Q96KF2 57 aa7.46□□□□□ -1.22
TRAF3-201ENST00000347662 ZZEF1O43149 2961 aa7.45□□□□□ -1.22
TRAF3-201ENST00000347662 NBEAQ8NFP9 2946 aa7.43□□□□□ -1.22
TRAF3-201ENST00000347662 USP34Q70CQ2 3546 aa7.43□□□□□ -1.22
TRAF3-201ENST00000347662 EIF4EBP3O60516 100 aaPredicted RBP7.43□□□□□ -1.22
TRAF3-201ENST00000347662 UTP20O75691 2785 aaKnown RBP7.42□□□□□ -1.22
TRAF3-201ENST00000347662 M0QZ58 72 aa7.42□□□□□ -1.22
TRAF3-201ENST00000347662 A0A1W2PNM2 257 aa7.41□□□□□ -1.22
TRAF3-201ENST00000347662 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
TRAF3-201ENST00000347662 DMXL1Q9Y485 3027 aa7.4□□□□□ -1.22
TRAF3-201ENST00000347662 Q8N9P0 234 aaPredicted RBP7.4□□□□□ -1.23
TRAF3-201ENST00000347662 ZCCHC13Q8WW36 166 aaKnown RBP7.39□□□□□ -1.23
TRAF3-201ENST00000347662 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
TRAF3-201ENST00000347662 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
TRAF3-201ENST00000347662 ROMO1P60602 79 aa7.35□□□□□ -1.23
TRAF3-201ENST00000347662 TNRC18O15417 2968 aaPredicted RBP7.35□□□□□ -1.23
TRAF3-201ENST00000347662 Q75L30 129 aa7.35□□□□□ -1.23
TRAF3-201ENST00000347662 SPTBN5Q9NRC6 3674 aaKnown RBP7.35□□□□□ -1.23
TRAF3-201ENST00000347662 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.23
TRAF3-201ENST00000347662 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
TRAF3-201ENST00000347662 RPL37P61927 97 aaKnown RBP7.3□□□□□ -1.24
TRAF3-201ENST00000347662 HIVEP1P15822 2718 aa7.29□□□□□ -1.24
TRAF3-201ENST00000347662 KMT2BQ9UMN6 2715 aaPredicted RBP7.29□□□□□ -1.24
TRAF3-201ENST00000347662 ADM2Q7Z4H4 148 aa7.29□□□□□ -1.24
TRAF3-201ENST00000347662 LOC400499M0QZD8 3231 aa7.28□□□□□ -1.24
TRAF3-201ENST00000347662 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
TRAF3-201ENST00000347662 MYO15AQ9UKN7 3530 aa7.27□□□□□ -1.25
TRAF3-201ENST00000347662 APCP25054 2843 aa7.27□□□□□ -1.25
TRAF3-201ENST00000347662 FAM229BQ4G0N7 80 aa7.25□□□□□ -1.25
TRAF3-201ENST00000347662 OCR1Q9BZK8 76 aa7.25□□□□□ -1.25
TRAF3-201ENST00000347662 FP248Q71RG6 208 aaPredicted RBP7.25□□□□□ -1.25
TRAF3-201ENST00000347662 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
TRAF3-201ENST00000347662 Q5W150 140 aa7.23□□□□□ -1.25
TRAF3-201ENST00000347662 DCHS2Q6V1P9 2916 aa7.2□□□□□ -1.26
TRAF3-201ENST00000347662 ZANQ9Y493 2812 aa7.19□□□□□ -1.26
TRAF3-201ENST00000347662 SPATA8Q6RVD6 105 aa7.19□□□□□ -1.26
TRAF3-201ENST00000347662 NIPBLQ6KC79 2804 aaeCLIP7.19□□□□□ -1.26
TRAF3-201ENST00000347662 Q8NDZ9 215 aa7.17□□□□□ -1.26
TRAF3-201ENST00000347662 MMP24-AS1A0A0U1RRL7 71 aa7.15□□□□□ -1.27
TRAF3-201ENST00000347662 KRTAP1-5Q9BYS1 174 aa7.12□□□□□ -1.27
TRAF3-201ENST00000347662 Q5VV11 94 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms