RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 SEC61GP60059 68 aa11.34□□□□□ -0.59
KRCC1-201ENST00000347055 Q5VV11 94 aa11.34□□□□□ -0.59
KRCC1-201ENST00000347055 UNC79Q9P2D8 2635 aa11.34□□□□□ -0.59
KRCC1-201ENST00000347055 A8MUN3 132 aa11.33□□□□□ -0.59
KRCC1-201ENST00000347055 DEFB116Q30KQ4 102 aa11.33□□□□□ -0.59
KRCC1-201ENST00000347055 Q8N9P0 234 aaPredicted RBP11.33□□□□□ -0.59
KRCC1-201ENST00000347055 ITPR2Q14571 2701 aa11.33□□□□□ -0.6
KRCC1-201ENST00000347055 A0A0G2JQZ4 141 aa11.31□□□□□ -0.6
KRCC1-201ENST00000347055 A0A1W2PNN7 141 aa11.31□□□□□ -0.6
KRCC1-201ENST00000347055 RPL37AP61513 92 aaKnown RBP11.31□□□□□ -0.6
KRCC1-201ENST00000347055 C14orf177Q52M58 125 aa11.31□□□□□ -0.6
KRCC1-201ENST00000347055 IGLV7-46A0A075B6I9 117 aa11.29□□□□□ -0.6
KRCC1-201ENST00000347055 TP53AIP1Q9HCN2 124 aa11.29□□□□□ -0.6
KRCC1-201ENST00000347055 TENM1Q9UKZ4 2725 aa11.29□□□□□ -0.6
KRCC1-201ENST00000347055 KMT2BQ9UMN6 2715 aaPredicted RBP11.29□□□□□ -0.6
KRCC1-201ENST00000347055 MMP24-AS1A0A0U1RRL7 71 aa11.27□□□□□ -0.61
KRCC1-201ENST00000347055 LOC101927531A0A1B0GV80 90 aa11.27□□□□□ -0.61
KRCC1-201ENST00000347055 Q75L30 129 aa11.26□□□□□ -0.61
KRCC1-201ENST00000347055 NSD1Q96L73 2696 aaPredicted RBP11.26□□□□□ -0.61
KRCC1-201ENST00000347055 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
KRCC1-201ENST00000347055 MOBPQ13875 183 aa11.25□□□□□ -0.61
KRCC1-201ENST00000347055 ASB16-AS1Q495Z4 193 aa11.25□□□□□ -0.61
KRCC1-201ENST00000347055 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
KRCC1-201ENST00000347055 CHKB-CPT1BH3BT56 60 aa11.22□□□□□ -0.61
KRCC1-201ENST00000347055 COA5Q86WW8 74 aa11.21□□□□□ -0.62
KRCC1-201ENST00000347055 PRR15LQ9BU68 103 aa11.21□□□□□ -0.62
KRCC1-201ENST00000347055 FASNP49327 2511 aaKnown RBP11.19□□□□□ -0.62
KRCC1-201ENST00000347055 Q6ZR54 194 aa11.18□□□□□ -0.62
KRCC1-201ENST00000347055 ATP11AUNQ6ZP68 121 aa11.18□□□□□ -0.62
KRCC1-201ENST00000347055 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
KRCC1-201ENST00000347055 ATRQ13535 2644 aa11.16□□□□□ -0.62
KRCC1-201ENST00000347055 KRTAP13-1Q8IUC0 172 aa11.16□□□□□ -0.62
KRCC1-201ENST00000347055 CD164Q04900 197 aa11.14□□□□□ -0.63
KRCC1-201ENST00000347055 DNAH3Q8TD57 4116 aa11.14□□□□□ -0.63
KRCC1-201ENST00000347055 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
KRCC1-201ENST00000347055 TRRAPQ9Y4A5 3859 aa11.13□□□□□ -0.63
KRCC1-201ENST00000347055 PKD1L1Q8TDX9 2849 aa11.13□□□□□ -0.63
KRCC1-201ENST00000347055 PRB2P02812 416 aaPredicted RBP11.13□□□□□ -0.63
KRCC1-201ENST00000347055 LINC01558Q9Y6Z2 57 aa11.13□□□□□ -0.63
KRCC1-201ENST00000347055 OTOGQ6ZRI0 2925 aa11.12□□□□□ -0.63
KRCC1-201ENST00000347055 Q96NJ1 140 aa11.12□□□□□ -0.63
KRCC1-201ENST00000347055 KRTAP1-5Q9BYS1 174 aa11.12□□□□□ -0.63
KRCC1-201ENST00000347055 PLAC8Q9NZF1 115 aa11.12□□□□□ -0.63
KRCC1-201ENST00000347055 TENM3Q9P273 2699 aa11.11□□□□□ -0.63
KRCC1-201ENST00000347055 KTN1-AS1Q86SY8 53 aa11.1□□□□□ -0.63
KRCC1-201ENST00000347055 C8orf17Q9NRJ1 99 aa11.1□□□□□ -0.63
KRCC1-201ENST00000347055 CDC42SE1Q9NRR8 79 aa11.1□□□□□ -0.63
KRCC1-201ENST00000347055 LINC00483Q53H64 154 aa11.09□□□□□ -0.63
KRCC1-201ENST00000347055 KRTAP24-1Q3LI83 254 aa11.08□□□□□ -0.64
KRCC1-201ENST00000347055 A6NED7 52 aa11.07□□□□□ -0.64
KRCC1-201ENST00000347055 NDUFS5O43920 106 aa11.07□□□□□ -0.64
KRCC1-201ENST00000347055 ANK2Q01484 3957 aa11.07□□□□□ -0.64
KRCC1-201ENST00000347055 HELZ2Q9BYK8 2649 aaKnown RBP11.06□□□□□ -0.64
KRCC1-201ENST00000347055 CHTF8P0CG12 524 aa11.06□□□□□ -0.64
KRCC1-201ENST00000347055 ZNF706Q9Y5V0 76 aaPredicted RBP11.06□□□□□ -0.64
KRCC1-201ENST00000347055 A0A1B0GVX0 72 aa11.05□□□□□ -0.64
KRCC1-201ENST00000347055 LCA10Q71F78 164 aa11.05□□□□□ -0.64
KRCC1-201ENST00000347055 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
KRCC1-201ENST00000347055 A8MU10 97 aa11.02□□□□□ -0.65
KRCC1-201ENST00000347055 CMYA5Q8N3K9 4069 aa11.01□□□□□ -0.65
KRCC1-201ENST00000347055 PCOTHQ58A44 107 aa11□□□□□ -0.65
KRCC1-201ENST00000347055 MRPL34Q9BQ48 92 aaKnown RBP11□□□□□ -0.65
KRCC1-201ENST00000347055 CDK2AP2O75956 126 aa11□□□□□ -0.65
KRCC1-201ENST00000347055 A6NN06 94 aa10.99□□□□□ -0.65
KRCC1-201ENST00000347055 K7EIL1 84 aa10.99□□□□□ -0.65
KRCC1-201ENST00000347055 APLNQ9ULZ1 77 aa10.99□□□□□ -0.65
KRCC1-201ENST00000347055 SPTSSBQ8NFR3 76 aa10.96□□□□□ -0.65
KRCC1-201ENST00000347055 HRES1P13985 223 aa10.95□□□□□ -0.66
KRCC1-201ENST00000347055 IGLV9-49A0A0B4J1Y8 123 aa10.94□□□□□ -0.66
KRCC1-201ENST00000347055 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
KRCC1-201ENST00000347055 IGHV6-1A0A0B4J1U7 121 aa10.93□□□□□ -0.66
KRCC1-201ENST00000347055 SPAG11AQ6PDA7 123 aa10.92□□□□□ -0.66
KRCC1-201ENST00000347055 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
KRCC1-201ENST00000347055 WWC2-AS2Q96NR7 200 aa10.91□□□□□ -0.66
KRCC1-201ENST00000347055 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
KRCC1-201ENST00000347055 Q6ZRN7 208 aaPredicted RBP10.88□□□□□ -0.67
KRCC1-201ENST00000347055 MAST4O15021 2626 aa10.87□□□□□ -0.67
KRCC1-201ENST00000347055 C7orf65Q6ZTY9 151 aa10.87□□□□□ -0.67
KRCC1-201ENST00000347055 F8P00451 2351 aa10.87□□□□□ -0.67
KRCC1-201ENST00000347055 PANO1I0J062 215 aa10.86□□□□□ -0.67
KRCC1-201ENST00000347055 FLNBO75369 2602 aaKnown RBP10.84□□□□□ -0.67
KRCC1-201ENST00000347055 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
KRCC1-201ENST00000347055 BAHCC1Q9P281 2608 aa10.84□□□□□ -0.67
KRCC1-201ENST00000347055 DNAH10Q8IVF4 4471 aa10.83□□□□□ -0.68
KRCC1-201ENST00000347055 RBM12B-AS1Q9P1G2 102 aa10.82□□□□□ -0.68
KRCC1-201ENST00000347055 IGLV5-52A0A0A0MRZ9 124 aa10.82□□□□□ -0.68
KRCC1-201ENST00000347055 C8orf87E5RJ46 101 aa10.82□□□□□ -0.68
KRCC1-201ENST00000347055 MDFIQ99750 246 aa10.82□□□□□ -0.68
KRCC1-201ENST00000347055 TENM2Q9NT68 2774 aa10.81□□□□□ -0.68
KRCC1-201ENST00000347055 ACYP2P14621 99 aa10.81□□□□□ -0.68
KRCC1-201ENST00000347055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.81□□□□□ -0.68
KRCC1-201ENST00000347055 HECTD1Q9ULT8 2610 aa10.81□□□□□ -0.68
KRCC1-201ENST00000347055 DYNC2H1Q8NCM8 4307 aaKnown RBP10.8□□□□□ -0.68
KRCC1-201ENST00000347055 ZNF861PO60384 105 aa10.8□□□□□ -0.68
KRCC1-201ENST00000347055 SPINK7P58062 85 aa10.79□□□□□ -0.68
KRCC1-201ENST00000347055 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
KRCC1-201ENST00000347055 NUPR2A6NF83 97 aa10.76□□□□□ -0.69
KRCC1-201ENST00000347055 PSORS1C2Q9UIG4 136 aa10.75□□□□□ -0.69
KRCC1-201ENST00000347055 A0A087X002 238 aa10.74□□□□□ -0.69
KRCC1-201ENST00000347055 NOTCH2NLQ7Z3S9 236 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms