RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 FAM229BQ4G0N7 80 aa8.17□□□□□ -1.1
DNMT3A-202ENST00000321117 KRTAP26-1Q6PEX3 210 aa8.17□□□□□ -1.1
DNMT3A-202ENST00000321117 CELSR2Q9HCU4 2923 aa8.17□□□□□ -1.1
DNMT3A-202ENST00000321117 ITPR2Q14571 2701 aa8.17□□□□□ -1.1
DNMT3A-202ENST00000321117 KRTAP24-1Q3LI83 254 aa8.17□□□□□ -1.1
DNMT3A-202ENST00000321117 NOTCH1P46531 2555 aa8.16□□□□□ -1.1
DNMT3A-202ENST00000321117 PRR15Q8IV56 129 aa8.16□□□□□ -1.1
DNMT3A-202ENST00000321117 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.11
DNMT3A-202ENST00000321117 SPRR1AP35321 89 aa8.13□□□□□ -1.11
DNMT3A-202ENST00000321117 SPENQ96T58 3664 aaKnown RBP8.12□□□□□ -1.11
DNMT3A-202ENST00000321117 Q1T7F1 81 aa8.09□□□□□ -1.12
DNMT3A-202ENST00000321117 SPAG11AQ6PDA7 123 aa8.09□□□□□ -1.12
DNMT3A-202ENST00000321117 MOBPQ13875 183 aa8.08□□□□□ -1.12
DNMT3A-202ENST00000321117 COA5Q86WW8 74 aa8.08□□□□□ -1.12
DNMT3A-202ENST00000321117 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
DNMT3A-202ENST00000321117 CYP4F30PQ9H0H9 118 aa8.08□□□□□ -1.12
DNMT3A-202ENST00000321117 CD164Q04900 197 aa8.08□□□□□ -1.12
DNMT3A-202ENST00000321117 NUPR2A6NF83 97 aa8.06□□□□□ -1.12
DNMT3A-202ENST00000321117 TNP2Q05952 138 aa8.06□□□□□ -1.12
DNMT3A-202ENST00000321117 SPANXA2-OT1Q8N9U9 137 aa8.06□□□□□ -1.12
DNMT3A-202ENST00000321117 BAHCC1Q9P281 2608 aa8.05□□□□□ -1.12
DNMT3A-202ENST00000321117 STAB1Q9NY15 2570 aa8.05□□□□□ -1.12
DNMT3A-202ENST00000321117 NIPBLQ6KC79 2804 aaeCLIP8.04□□□□□ -1.12
DNMT3A-202ENST00000321117 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
DNMT3A-202ENST00000321117 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
DNMT3A-202ENST00000321117 K7EIL1 84 aa8.02□□□□□ -1.13
DNMT3A-202ENST00000321117 MDFIQ99750 246 aa8.02□□□□□ -1.13
DNMT3A-202ENST00000321117 NBDYA0A0U1RRE5 68 aa8.01□□□□□ -1.13
DNMT3A-202ENST00000321117 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
DNMT3A-202ENST00000321117 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
DNMT3A-202ENST00000321117 BSNQ9UPA5 3926 aa8□□□□□ -1.13
DNMT3A-202ENST00000321117 HIVEP1P15822 2718 aa8□□□□□ -1.13
DNMT3A-202ENST00000321117 MRPL34Q9BQ48 92 aaKnown RBP7.99□□□□□ -1.13
DNMT3A-202ENST00000321117 COL6A5A8TX70 2615 aa7.99□□□□□ -1.13
DNMT3A-202ENST00000321117 IGLV5-52A0A0A0MRZ9 124 aa7.98□□□□□ -1.13
DNMT3A-202ENST00000321117 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
DNMT3A-202ENST00000321117 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
DNMT3A-202ENST00000321117 SPINK1P00995 79 aa7.97□□□□□ -1.13
DNMT3A-202ENST00000321117 NSD1Q96L73 2696 aaPredicted RBP7.97□□□□□ -1.13
DNMT3A-202ENST00000321117 KTN1-AS1Q86SY8 53 aa7.96□□□□□ -1.13
DNMT3A-202ENST00000321117 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.14
DNMT3A-202ENST00000321117 A0A1B0GVX0 72 aa7.96□□□□□ -1.14
DNMT3A-202ENST00000321117 ATP11AUNQ6ZP68 121 aa7.95□□□□□ -1.14
DNMT3A-202ENST00000321117 ACYP2P14621 99 aa7.95□□□□□ -1.14
DNMT3A-202ENST00000321117 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
DNMT3A-202ENST00000321117 NBEAL1Q6ZS30 2694 aa7.93□□□□□ -1.14
DNMT3A-202ENST00000321117 A0A1B0GU69 56 aa7.93□□□□□ -1.14
DNMT3A-202ENST00000321117 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
DNMT3A-202ENST00000321117 RTL8CO15255 209 aa7.91□□□□□ -1.14
DNMT3A-202ENST00000321117 LINC00472Q9H8W2 130 aa7.91□□□□□ -1.14
DNMT3A-202ENST00000321117 LY6G6CO95867 125 aa7.91□□□□□ -1.14
DNMT3A-202ENST00000321117 MMP24-AS1A0A0U1RRL7 71 aa7.9□□□□□ -1.14
DNMT3A-202ENST00000321117 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.15
DNMT3A-202ENST00000321117 LCE6AA0A183 80 aa7.9□□□□□ -1.15
DNMT3A-202ENST00000321117 SPRR1BP22528 89 aa7.89□□□□□ -1.15
DNMT3A-202ENST00000321117 ANAPC11Q9NYG5 84 aa7.89□□□□□ -1.15
DNMT3A-202ENST00000321117 C1orf134Q5TEV5 83 aa7.89□□□□□ -1.15
DNMT3A-202ENST00000321117 CUBNO60494 3623 aa7.89□□□□□ -1.15
DNMT3A-202ENST00000321117 APLNQ9ULZ1 77 aa7.88□□□□□ -1.15
DNMT3A-202ENST00000321117 KRTAP7-1Q8IUC3 87 aa7.88□□□□□ -1.15
DNMT3A-202ENST00000321117 Q5VV11 94 aa7.87□□□□□ -1.15
DNMT3A-202ENST00000321117 IGKV2D-30A0A075B6S6 120 aa7.87□□□□□ -1.15
DNMT3A-202ENST00000321117 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
DNMT3A-202ENST00000321117 KRTAP1-5Q9BYS1 174 aa7.87□□□□□ -1.15
DNMT3A-202ENST00000321117 ZNF861PO60384 105 aa7.86□□□□□ -1.15
DNMT3A-202ENST00000321117 C7orf65Q6ZTY9 151 aa7.86□□□□□ -1.15
DNMT3A-202ENST00000321117 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
DNMT3A-202ENST00000321117 LINC00313P59037 77 aa7.85□□□□□ -1.15
DNMT3A-202ENST00000321117 PSORS1C2Q9UIG4 136 aa7.85□□□□□ -1.15
DNMT3A-202ENST00000321117 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
DNMT3A-202ENST00000321117 CDC42SE1Q9NRR8 79 aa7.83□□□□□ -1.16
DNMT3A-202ENST00000321117 Q75L30 129 aa7.83□□□□□ -1.16
DNMT3A-202ENST00000321117 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
DNMT3A-202ENST00000321117 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
DNMT3A-202ENST00000321117 A0A087WTM6 91 aa7.82□□□□□ -1.16
DNMT3A-202ENST00000321117 LCA10Q71F78 164 aa7.81□□□□□ -1.16
DNMT3A-202ENST00000321117 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
DNMT3A-202ENST00000321117 PRR26Q8N8Z3 221 aa7.8□□□□□ -1.16
DNMT3A-202ENST00000321117 SPACA4Q8TDM5 124 aa7.79□□□□□ -1.16
DNMT3A-202ENST00000321117 VWFP04275 2813 aa7.79□□□□□ -1.16
DNMT3A-202ENST00000321117 KMT2BQ9UMN6 2715 aaPredicted RBP7.79□□□□□ -1.16
DNMT3A-202ENST00000321117 SSBP3-AS1Q7Z2R9 100 aa7.77□□□□□ -1.17
DNMT3A-202ENST00000321117 LINC01558Q9Y6Z2 57 aa7.77□□□□□ -1.17
DNMT3A-202ENST00000321117 TENM3Q9P273 2699 aa7.75□□□□□ -1.17
DNMT3A-202ENST00000321117 STAB2Q8WWQ8 2551 aa7.74□□□□□ -1.17
DNMT3A-202ENST00000321117 TENM1Q9UKZ4 2725 aa7.74□□□□□ -1.17
DNMT3A-202ENST00000321117 HRES1P13985 223 aa7.74□□□□□ -1.17
DNMT3A-202ENST00000321117 IGLV7-43P04211 117 aa7.73□□□□□ -1.17
DNMT3A-202ENST00000321117 KRTAP11-1Q8IUC1 163 aa7.73□□□□□ -1.17
DNMT3A-202ENST00000321117 CSMD2Q7Z408 3487 aa7.71□□□□□ -1.17
DNMT3A-202ENST00000321117 UQCR11O14957 56 aa7.71□□□□□ -1.18
DNMT3A-202ENST00000321117 PANO1I0J062 215 aa7.69□□□□□ -1.18
DNMT3A-202ENST00000321117 WWC2-AS2Q96NR7 200 aa7.69□□□□□ -1.18
DNMT3A-202ENST00000321117 Q6ZR54 194 aa7.67□□□□□ -1.18
DNMT3A-202ENST00000321117 PDZD2O15018 2839 aa7.67□□□□□ -1.18
DNMT3A-202ENST00000321117 SPINK7P58062 85 aa7.66□□□□□ -1.18
DNMT3A-202ENST00000321117 MIR22HGQ0VDD5 57 aa7.66□□□□□ -1.18
DNMT3A-202ENST00000321117 Q96NJ1 140 aa7.65□□□□□ -1.18
DNMT3A-202ENST00000321117 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
DNMT3A-202ENST00000321117 A8MU10 97 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms