RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 IGKV2-30P06310 120 aa10.77□□□□□ -0.69
CLIP4-201ENST00000320081 F8WDY8 70 aa10.76□□□□□ -0.69
CLIP4-201ENST00000320081 IGLV1-50A0A075B6I6 118 aa10.76□□□□□ -0.69
CLIP4-201ENST00000320081 PMAIP1Q13794 54 aa10.75□□□□□ -0.69
CLIP4-201ENST00000320081 PRO0628Q9UI54 55 aa10.75□□□□□ -0.69
CLIP4-201ENST00000320081 KCNQ1DNQ9H478 68 aa10.74□□□□□ -0.69
CLIP4-201ENST00000320081 LINC01600Q96MT4 127 aa10.73□□□□□ -0.69
CLIP4-201ENST00000320081 hDV103S1A0JD37 113 aa10.73□□□□□ -0.69
CLIP4-201ENST00000320081 RTL8CO15255 209 aa10.72□□□□□ -0.69
CLIP4-201ENST00000320081 LINC00336Q6ZUF6 198 aa10.72□□□□□ -0.69
CLIP4-201ENST00000320081 FBN1P35555 2871 aaKnown RBP10.7□□□□□ -0.7
CLIP4-201ENST00000320081 IGFL1Q6UW32 110 aa10.7□□□□□ -0.7
CLIP4-201ENST00000320081 PKD1L1Q8TDX9 2849 aa10.69□□□□□ -0.7
CLIP4-201ENST00000320081 SPAG11AQ6PDA7 123 aa10.68□□□□□ -0.7
CLIP4-201ENST00000320081 OBSCN-AS1Q96MR7 158 aa10.67□□□□□ -0.7
CLIP4-201ENST00000320081 A0A1W2PNM2 257 aa10.66□□□□□ -0.7
CLIP4-201ENST00000320081 TENM3Q9P273 2699 aa10.65□□□□□ -0.7
CLIP4-201ENST00000320081 H7BZZ5 65 aa10.64□□□□□ -0.71
CLIP4-201ENST00000320081 BSNQ9UPA5 3926 aa10.63□□□□□ -0.71
CLIP4-201ENST00000320081 CSMD2Q7Z408 3487 aa10.61□□□□□ -0.71
CLIP4-201ENST00000320081 IGLV8-61A0A075B6I0 122 aa10.61□□□□□ -0.71
CLIP4-201ENST00000320081 TRAV22A0A0B4J277 110 aa10.61□□□□□ -0.71
CLIP4-201ENST00000320081 BCE1O60756 84 aa10.61□□□□□ -0.71
CLIP4-201ENST00000320081 PDZD2O15018 2839 aa10.6□□□□□ -0.71
CLIP4-201ENST00000320081 OXTP01178 125 aa10.58□□□□□ -0.72
CLIP4-201ENST00000320081 A8MUN3 132 aa10.55□□□□□ -0.72
CLIP4-201ENST00000320081 C9orf163Q8N9P6 203 aa10.54□□□□□ -0.72
CLIP4-201ENST00000320081 TENM1Q9UKZ4 2725 aa10.53□□□□□ -0.72
CLIP4-201ENST00000320081 KLKP1Q107X0 134 aa10.53□□□□□ -0.72
CLIP4-201ENST00000320081 ZFHX3Q15911 3703 aa10.53□□□□□ -0.72
CLIP4-201ENST00000320081 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
CLIP4-201ENST00000320081 Q5XG85 94 aa10.52□□□□□ -0.73
CLIP4-201ENST00000320081 A8MWP4 228 aa10.51□□□□□ -0.73
CLIP4-201ENST00000320081 VWFP04275 2813 aa10.5□□□□□ -0.73
CLIP4-201ENST00000320081 A0A087WTM6 91 aa10.49□□□□□ -0.73
CLIP4-201ENST00000320081 PSORS1C2Q9UIG4 136 aa10.48□□□□□ -0.73
CLIP4-201ENST00000320081 PRR15Q8IV56 129 aa10.48□□□□□ -0.73
CLIP4-201ENST00000320081 DSCR10P59022 87 aa10.47□□□□□ -0.73
CLIP4-201ENST00000320081 PLA2G1BP04054 148 aaKnown RBP10.45□□□□□ -0.74
CLIP4-201ENST00000320081 TYMSOSQ8TAI1 123 aa10.45□□□□□ -0.74
CLIP4-201ENST00000320081 LINC00313P59037 77 aa10.45□□□□□ -0.74
CLIP4-201ENST00000320081 C7orf65Q6ZTY9 151 aa10.45□□□□□ -0.74
CLIP4-201ENST00000320081 A0A1B0GW54 56 aa10.44□□□□□ -0.74
CLIP4-201ENST00000320081 TLX1NBP0CAT3 122 aa10.44□□□□□ -0.74
CLIP4-201ENST00000320081 APLNQ9ULZ1 77 aa10.44□□□□□ -0.74
CLIP4-201ENST00000320081 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.42□□□□□ -0.74
CLIP4-201ENST00000320081 Q96NJ1 140 aa10.41□□□□□ -0.74
CLIP4-201ENST00000320081 KRTAP1-5Q9BYS1 174 aa10.41□□□□□ -0.74
CLIP4-201ENST00000320081 TP53AIP1Q9HCN2 124 aa10.41□□□□□ -0.74
CLIP4-201ENST00000320081 IGLV5-48A0A075B6I7 105 aa10.41□□□□□ -0.74
CLIP4-201ENST00000320081 WIPF1O43516 503 aa10.4□□□□□ -0.74
CLIP4-201ENST00000320081 ZNF861PO60384 105 aa10.4□□□□□ -0.74
CLIP4-201ENST00000320081 MRPL34Q9BQ48 92 aaKnown RBP10.4□□□□□ -0.74
CLIP4-201ENST00000320081 C8orf17Q9NRJ1 99 aa10.39□□□□□ -0.75
CLIP4-201ENST00000320081 K7ERS5 55 aa10.38□□□□□ -0.75
CLIP4-201ENST00000320081 LIMD2Q9BT23 127 aa10.38□□□□□ -0.75
CLIP4-201ENST00000320081 COA5Q86WW8 74 aa10.38□□□□□ -0.75
CLIP4-201ENST00000320081 OTOGQ6ZRI0 2925 aa10.38□□□□□ -0.75
CLIP4-201ENST00000320081 A0A1B0GU69 56 aa10.38□□□□□ -0.75
CLIP4-201ENST00000320081 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-201ENST00000320081 VPS13CQ709C8 3753 aa10.35□□□□□ -0.75
CLIP4-201ENST00000320081 TNP2Q05952 138 aa10.35□□□□□ -0.75
CLIP4-201ENST00000320081 SRRM2Q9UQ35 2752 aaKnown RBP10.35□□□□□ -0.75
CLIP4-201ENST00000320081 OCR1Q9BZK8 76 aa10.34□□□□□ -0.75
CLIP4-201ENST00000320081 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
CLIP4-201ENST00000320081 NBPF19A0A087WUL8 3843 aa10.33□□□□□ -0.76
CLIP4-201ENST00000320081 C9orf92A6NGG3 77 aa10.33□□□□□ -0.76
CLIP4-201ENST00000320081 ACYP2P14621 99 aa10.33□□□□□ -0.76
CLIP4-201ENST00000320081 FAM229BQ4G0N7 80 aa10.33□□□□□ -0.76
CLIP4-201ENST00000320081 WWC2-AS2Q96NR7 200 aa10.33□□□□□ -0.76
CLIP4-201ENST00000320081 CNBPP62633 177 aaKnown RBP10.33□□□□□ -0.76
CLIP4-201ENST00000320081 SPRR4Q96PI1 79 aa10.33□□□□□ -0.76
CLIP4-201ENST00000320081 A0A1B0GVX0 72 aa10.31□□□□□ -0.76
CLIP4-201ENST00000320081 TENM2Q9NT68 2774 aa10.28□□□□□ -0.76
CLIP4-201ENST00000320081 ATP11AUNQ6ZP68 121 aa10.28□□□□□ -0.76
CLIP4-201ENST00000320081 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
CLIP4-201ENST00000320081 PRR26Q8N8Z3 221 aa10.27□□□□□ -0.77
CLIP4-201ENST00000320081 IGLV7-43P04211 117 aa10.26□□□□□ -0.77
CLIP4-201ENST00000320081 H3BPC8 53 aa10.25□□□□□ -0.77
CLIP4-201ENST00000320081 TGP01266 2768 aa10.23□□□□□ -0.77
CLIP4-201ENST00000320081 IGLV5-37A0A075B6J1 123 aa10.21□□□□□ -0.77
CLIP4-201ENST00000320081 LOC101927531A0A1B0GV80 90 aa10.21□□□□□ -0.77
CLIP4-201ENST00000320081 FAM229AH3BQW9 127 aa10.21□□□□□ -0.77
CLIP4-201ENST00000320081 PANO1I0J062 215 aa10.2□□□□□ -0.78
CLIP4-201ENST00000320081 Q8N1X5 172 aa10.19□□□□□ -0.78
CLIP4-201ENST00000320081 SPRR1AP35321 89 aa10.16□□□□□ -0.78
CLIP4-201ENST00000320081 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
CLIP4-201ENST00000320081 LINC00304Q8N9R0 145 aa10.13□□□□□ -0.79
CLIP4-201ENST00000320081 C8orf87E5RJ46 101 aa10.09□□□□□ -0.79
CLIP4-201ENST00000320081 Q8N9P0 234 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-201ENST00000320081 MMP24-AS1A0A0U1RRL7 71 aa10.04□□□□□ -0.8
CLIP4-201ENST00000320081 KRTAP11-1Q8IUC1 163 aa10.04□□□□□ -0.8
CLIP4-201ENST00000320081 LINC00472Q9H8W2 130 aa10□□□□□ -0.81
CLIP4-201ENST00000320081 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
CLIP4-201ENST00000320081 UQCR11O14957 56 aa9.98□□□□□ -0.81
CLIP4-201ENST00000320081 Q1T7F1 81 aa9.98□□□□□ -0.81
CLIP4-201ENST00000320081 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
CLIP4-201ENST00000320081 KRTAP7-1Q8IUC3 87 aa9.97□□□□□ -0.81
CLIP4-201ENST00000320081 HRES1P13985 223 aa9.95□□□□□ -0.82
CLIP4-201ENST00000320081 CD164Q04900 197 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms