RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 LIMD2Q9BT23 127 aa6.71□□□□□ -1.34
APOBEC3F-201ENST00000308521 DNAH1Q9P2D7 4330 aa6.7□□□□□ -1.34
APOBEC3F-201ENST00000308521 PSPHP1O15172 72 aa6.7□□□□□ -1.34
APOBEC3F-201ENST00000308521 DNAH10OSP0CZ25 163 aa6.69□□□□□ -1.34
APOBEC3F-201ENST00000308521 DYNC2H1Q8NCM8 4307 aaKnown RBP6.68□□□□□ -1.34
APOBEC3F-201ENST00000308521 CASC10Q5T4H9 136 aa6.68□□□□□ -1.34
APOBEC3F-201ENST00000308521 C15orf56Q8N910 161 aa6.68□□□□□ -1.34
APOBEC3F-201ENST00000308521 Q5VV11 94 aa6.68□□□□□ -1.34
APOBEC3F-201ENST00000308521 IGLV5-48A0A075B6I7 105 aa6.67□□□□□ -1.34
APOBEC3F-201ENST00000308521 KCNQ1DNQ9H478 68 aa6.67□□□□□ -1.34
APOBEC3F-201ENST00000308521 Q8N9L7 120 aa6.66□□□□□ -1.34
APOBEC3F-201ENST00000308521 APLNQ9ULZ1 77 aa6.66□□□□□ -1.34
APOBEC3F-201ENST00000308521 A8MUN3 132 aa6.65□□□□□ -1.34
APOBEC3F-201ENST00000308521 UBE2DNLQ8IWF7 75 aa6.65□□□□□ -1.34
APOBEC3F-201ENST00000308521 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
APOBEC3F-201ENST00000308521 Q8N377 158 aa6.65□□□□□ -1.35
APOBEC3F-201ENST00000308521 ETDCA0A1B0GVM5 59 aa6.64□□□□□ -1.35
APOBEC3F-201ENST00000308521 KMT2AQ03164 3969 aa6.64□□□□□ -1.35
APOBEC3F-201ENST00000308521 A6NN06 94 aa6.63□□□□□ -1.35
APOBEC3F-201ENST00000308521 C16orf90A8MZG2 172 aa6.63□□□□□ -1.35
APOBEC3F-201ENST00000308521 C3orf84H3BNL1 204 aa6.63□□□□□ -1.35
APOBEC3F-201ENST00000308521 NKAPP1Q8N9T2 125 aa6.63□□□□□ -1.35
APOBEC3F-201ENST00000308521 DHRS4-AS1Q9P1J3 65 aa6.63□□□□□ -1.35
APOBEC3F-201ENST00000308521 PLA2G2DQ9UNK4 145 aa6.63□□□□□ -1.35
APOBEC3F-201ENST00000308521 LRCOL1A6NCL2 159 aa6.62□□□□□ -1.35
APOBEC3F-201ENST00000308521 C7orf65Q6ZTY9 151 aa6.62□□□□□ -1.35
APOBEC3F-201ENST00000308521 Q75L30 129 aa6.62□□□□□ -1.35
APOBEC3F-201ENST00000308521 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
APOBEC3F-201ENST00000308521 Q9BRP9 147 aa6.62□□□□□ -1.35
APOBEC3F-201ENST00000308521 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
APOBEC3F-201ENST00000308521 SMIM29Q86T20 159 aa6.61□□□□□ -1.35
APOBEC3F-201ENST00000308521 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
APOBEC3F-201ENST00000308521 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
APOBEC3F-201ENST00000308521 HCG22E2RYF7 251 aa6.6□□□□□ -1.35
APOBEC3F-201ENST00000308521 TLX1NBP0CAT3 122 aa6.6□□□□□ -1.35
APOBEC3F-201ENST00000308521 DEFB105AQ8NG35 78 aa6.6□□□□□ -1.35
APOBEC3F-201ENST00000308521 FAM30AQ9NZY2 134 aa6.6□□□□□ -1.35
APOBEC3F-201ENST00000308521 A0A1W2PNM2 257 aa6.6□□□□□ -1.35
APOBEC3F-201ENST00000308521 SERTAD4-AS1Q5TG53 156 aa6.6□□□□□ -1.35
APOBEC3F-201ENST00000308521 Q8N9P0 234 aaPredicted RBP6.6□□□□□ -1.35
APOBEC3F-201ENST00000308521 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
APOBEC3F-201ENST00000308521 LOC101927531A0A1B0GV80 90 aa6.59□□□□□ -1.35
APOBEC3F-201ENST00000308521 NUPR2A6NF83 97 aa6.59□□□□□ -1.35
APOBEC3F-201ENST00000308521 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
APOBEC3F-201ENST00000308521 Q6ZRX8 168 aa6.59□□□□□ -1.35
APOBEC3F-201ENST00000308521 LCA10Q71F78 164 aa6.59□□□□□ -1.35
APOBEC3F-201ENST00000308521 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.58□□□□□ -1.36
APOBEC3F-201ENST00000308521 SPRR1AP35321 89 aa6.58□□□□□ -1.36
APOBEC3F-201ENST00000308521 Q8NBF4 154 aa6.58□□□□□ -1.36
APOBEC3F-201ENST00000308521 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
APOBEC3F-201ENST00000308521 VPS13DQ5THJ4 4388 aa6.58□□□□□ -1.36
APOBEC3F-201ENST00000308521 H3BPC8 53 aa6.58□□□□□ -1.36
APOBEC3F-201ENST00000308521 CDC42SE1Q9NRR8 79 aa6.58□□□□□ -1.36
APOBEC3F-201ENST00000308521 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
APOBEC3F-201ENST00000308521 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
APOBEC3F-201ENST00000308521 IGLV1-50A0A075B6I6 118 aa6.56□□□□□ -1.36
APOBEC3F-201ENST00000308521 LINC00208Q96KT6 92 aa6.55□□□□□ -1.36
APOBEC3F-201ENST00000308521 MP68P56378 58 aa6.54□□□□□ -1.36
APOBEC3F-201ENST00000308521 DSCR10P59022 87 aa6.54□□□□□ -1.36
APOBEC3F-201ENST00000308521 SPTSSBQ8NFR3 76 aa6.54□□□□□ -1.36
APOBEC3F-201ENST00000308521 C8orf87E5RJ46 101 aa6.54□□□□□ -1.36
APOBEC3F-201ENST00000308521 PRR15LQ9BU68 103 aa6.53□□□□□ -1.36
APOBEC3F-201ENST00000308521 DNAH2Q9P225 4427 aa6.53□□□□□ -1.36
APOBEC3F-201ENST00000308521 NBDYA0A0U1RRE5 68 aa6.53□□□□□ -1.36
APOBEC3F-201ENST00000308521 A8MU10 97 aa6.53□□□□□ -1.36
APOBEC3F-201ENST00000308521 ST20-AS1Q8NBB2 130 aa6.53□□□□□ -1.36
APOBEC3F-201ENST00000308521 RPL37AP8A6NKH3 93 aa6.52□□□□□ -1.37
APOBEC3F-201ENST00000308521 A6NED7 52 aa6.52□□□□□ -1.37
APOBEC3F-201ENST00000308521 FAM168BA1KXE4 195 aa6.5□□□□□ -1.37
APOBEC3F-201ENST00000308521 K7EQZ3 153 aa6.5□□□□□ -1.37
APOBEC3F-201ENST00000308521 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
APOBEC3F-201ENST00000308521 LY6G6CO95867 125 aa6.48□□□□□ -1.37
APOBEC3F-201ENST00000308521 IGKV2-24A0A0C4DH68 120 aa6.47□□□□□ -1.37
APOBEC3F-201ENST00000308521 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
APOBEC3F-201ENST00000308521 LINC00476Q8WZB0 136 aa6.47□□□□□ -1.37
APOBEC3F-201ENST00000308521 A0A087X002 238 aa6.47□□□□□ -1.37
APOBEC3F-201ENST00000308521 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.37
APOBEC3F-201ENST00000308521 REG3GQ6UW15 175 aa6.46□□□□□ -1.37
APOBEC3F-201ENST00000308521 IGLV8-61A0A075B6I0 122 aa6.45□□□□□ -1.38
APOBEC3F-201ENST00000308521 PRR4Q16378 134 aa6.45□□□□□ -1.38
APOBEC3F-201ENST00000308521 Q6ZRN7 208 aaPredicted RBP6.45□□□□□ -1.38
APOBEC3F-201ENST00000308521 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
APOBEC3F-201ENST00000308521 HECTD4Q9Y4D8 3996 aa6.45□□□□□ -1.38
APOBEC3F-201ENST00000308521 H3BS24 57 aa6.45□□□□□ -1.38
APOBEC3F-201ENST00000308521 MOBPQ13875 183 aa6.45□□□□□ -1.38
APOBEC3F-201ENST00000308521 IGFL1Q6UW32 110 aa6.44□□□□□ -1.38
APOBEC3F-201ENST00000308521 WWC2-AS2Q96NR7 200 aa6.44□□□□□ -1.38
APOBEC3F-201ENST00000308521 PLAC8Q9NZF1 115 aa6.44□□□□□ -1.38
APOBEC3F-201ENST00000308521 A0A096LNI7 61 aa6.43□□□□□ -1.38
APOBEC3F-201ENST00000308521 CHTF8P0CG12 524 aa6.43□□□□□ -1.38
APOBEC3F-201ENST00000308521 CNBPP62633 177 aaKnown RBP6.41□□□□□ -1.38
APOBEC3F-201ENST00000308521 C9orf163Q8N9P6 203 aa6.41□□□□□ -1.38
APOBEC3F-201ENST00000308521 Q6ZR54 194 aa6.41□□□□□ -1.38
APOBEC3F-201ENST00000308521 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
APOBEC3F-201ENST00000308521 A0A1W2PNN7 141 aa6.4□□□□□ -1.38
APOBEC3F-201ENST00000308521 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.38
APOBEC3F-201ENST00000308521 IGLV7-46A0A075B6I9 117 aa6.4□□□□□ -1.39
APOBEC3F-201ENST00000308521 CASC2Q6XLA1 102 aa6.4□□□□□ -1.39
APOBEC3F-201ENST00000308521 COA5Q86WW8 74 aa6.4□□□□□ -1.39
APOBEC3F-201ENST00000308521 DNAH6Q9C0G6 4158 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms