RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 Q6ZR54 194 aa6.91□□□□□ -1.3
MSH3-201ENST00000265081 DNAH11Q96DT5 4516 aa6.91□□□□□ -1.3
MSH3-201ENST00000265081 C3orf84H3BNL1 204 aa6.91□□□□□ -1.3
MSH3-201ENST00000265081 DSCR10P59022 87 aa6.9□□□□□ -1.3
MSH3-201ENST00000265081 SCXQ7RTU7 201 aa6.9□□□□□ -1.3
MSH3-201ENST00000265081 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.3
MSH3-201ENST00000265081 STAB2Q8WWQ8 2551 aa6.9□□□□□ -1.3
MSH3-201ENST00000265081 BPY2O14599 106 aa6.9□□□□□ -1.31
MSH3-201ENST00000265081 PANO1I0J062 215 aa6.9□□□□□ -1.31
MSH3-201ENST00000265081 H7BZZ5 65 aa6.89□□□□□ -1.31
MSH3-201ENST00000265081 CHTF8P0CG12 524 aa6.89□□□□□ -1.31
MSH3-201ENST00000265081 PRLHP81277 87 aa6.89□□□□□ -1.31
MSH3-201ENST00000265081 IGKV2-24A0A0C4DH68 120 aa6.89□□□□□ -1.31
MSH3-201ENST00000265081 DPH3Q96FX2 82 aa6.88□□□□□ -1.31
MSH3-201ENST00000265081 DNHD1Q96M86 4753 aa6.88□□□□□ -1.31
MSH3-201ENST00000265081 PKD1P98161 4303 aa6.88□□□□□ -1.31
MSH3-201ENST00000265081 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
MSH3-201ENST00000265081 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.87□□□□□ -1.31
MSH3-201ENST00000265081 LINC00483Q53H64 154 aa6.87□□□□□ -1.31
MSH3-201ENST00000265081 Q8N9L7 120 aa6.86□□□□□ -1.31
MSH3-201ENST00000265081 MEGF8Q7Z7M0 2845 aa6.86□□□□□ -1.31
MSH3-201ENST00000265081 A0A087WTM6 91 aa6.86□□□□□ -1.31
MSH3-201ENST00000265081 J3KT08 172 aa6.85□□□□□ -1.31
MSH3-201ENST00000265081 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
MSH3-201ENST00000265081 A0A0U1RQV1 116 aa6.84□□□□□ -1.31
MSH3-201ENST00000265081 NDUFC1O43677 76 aa6.84□□□□□ -1.31
MSH3-201ENST00000265081 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.31
MSH3-201ENST00000265081 FAT2Q9NYQ8 4349 aa6.84□□□□□ -1.32
MSH3-201ENST00000265081 F8WEM9 126 aa6.84□□□□□ -1.32
MSH3-201ENST00000265081 OXTP01178 125 aa6.83□□□□□ -1.32
MSH3-201ENST00000265081 PLAC8Q9NZF1 115 aa6.83□□□□□ -1.32
MSH3-201ENST00000265081 MGAM2Q2M2H8 2515 aa6.83□□□□□ -1.32
MSH3-201ENST00000265081 RPL37AP61513 92 aaKnown RBP6.82□□□□□ -1.32
MSH3-201ENST00000265081 K7EQZ3 153 aa6.81□□□□□ -1.32
MSH3-201ENST00000265081 UBE2AP49459 152 aa6.81□□□□□ -1.32
MSH3-201ENST00000265081 LINC00472Q9H8W2 130 aa6.81□□□□□ -1.32
MSH3-201ENST00000265081 TMEM254Q8TBM7 123 aa6.8□□□□□ -1.32
MSH3-201ENST00000265081 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
MSH3-201ENST00000265081 ZCCHC13Q8WW36 166 aaKnown RBP6.8□□□□□ -1.32
MSH3-201ENST00000265081 KRTAP29-1A8MX34 341 aaPredicted RBP6.79□□□□□ -1.32
MSH3-201ENST00000265081 A0A0G2JQZ4 141 aa6.78□□□□□ -1.32
MSH3-201ENST00000265081 FAM236DA0A1B0GTK5 79 aa6.78□□□□□ -1.32
MSH3-201ENST00000265081 FAM236CP0DP71 79 aa6.78□□□□□ -1.32
MSH3-201ENST00000265081 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
MSH3-201ENST00000265081 RTL8CO15255 209 aa6.78□□□□□ -1.32
MSH3-201ENST00000265081 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
MSH3-201ENST00000265081 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
MSH3-201ENST00000265081 HCG22E2RYF7 251 aa6.76□□□□□ -1.33
MSH3-201ENST00000265081 Q96NJ1 140 aa6.76□□□□□ -1.33
MSH3-201ENST00000265081 A0A087WSZ3 146 aa6.76□□□□□ -1.33
MSH3-201ENST00000265081 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
MSH3-201ENST00000265081 SNURFQ9Y675 71 aa6.76□□□□□ -1.33
MSH3-201ENST00000265081 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
MSH3-201ENST00000265081 WWC2-AS2Q96NR7 200 aa6.73□□□□□ -1.33
MSH3-201ENST00000265081 A8MWP4 228 aa6.73□□□□□ -1.33
MSH3-201ENST00000265081 PRR15Q8IV56 129 aa6.73□□□□□ -1.33
MSH3-201ENST00000265081 KRTAP21-3Q3LHN1 58 aa6.72□□□□□ -1.33
MSH3-201ENST00000265081 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
MSH3-201ENST00000265081 ZNF706Q9Y5V0 76 aaPredicted RBP6.72□□□□□ -1.33
MSH3-201ENST00000265081 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.33
MSH3-201ENST00000265081 Q5XG85 94 aa6.71□□□□□ -1.33
MSH3-201ENST00000265081 HYDINQ4G0P3 5121 aa6.71□□□□□ -1.34
MSH3-201ENST00000265081 C5orf47Q569G3 176 aa6.71□□□□□ -1.34
MSH3-201ENST00000265081 ZNF861PO60384 105 aa6.7□□□□□ -1.34
MSH3-201ENST00000265081 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
MSH3-201ENST00000265081 FAM30AQ9NZY2 134 aa6.7□□□□□ -1.34
MSH3-201ENST00000265081 Q6ZSA8 131 aa6.68□□□□□ -1.34
MSH3-201ENST00000265081 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
MSH3-201ENST00000265081 DEFB116Q30KQ4 102 aa6.65□□□□□ -1.34
MSH3-201ENST00000265081 H3BPC8 53 aa6.65□□□□□ -1.35
MSH3-201ENST00000265081 MOBPQ13875 183 aa6.65□□□□□ -1.35
MSH3-201ENST00000265081 IGLV7-43P04211 117 aa6.64□□□□□ -1.35
MSH3-201ENST00000265081 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
MSH3-201ENST00000265081 LRP1BQ9NZR2 4599 aa6.62□□□□□ -1.35
MSH3-201ENST00000265081 CD164Q04900 197 aa6.62□□□□□ -1.35
MSH3-201ENST00000265081 CASC2Q6XLA1 102 aa6.62□□□□□ -1.35
MSH3-201ENST00000265081 SACSQ9NZJ4 4579 aa6.62□□□□□ -1.35
MSH3-201ENST00000265081 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
MSH3-201ENST00000265081 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
MSH3-201ENST00000265081 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
MSH3-201ENST00000265081 IGLV9-49A0A0B4J1Y8 123 aa6.6□□□□□ -1.35
MSH3-201ENST00000265081 TRAV22A0A0B4J277 110 aa6.6□□□□□ -1.35
MSH3-201ENST00000265081 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.36
MSH3-201ENST00000265081 WFDC13Q8IUB5 93 aa6.59□□□□□ -1.36
MSH3-201ENST00000265081 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
MSH3-201ENST00000265081 NDUFB1O75438 58 aa6.57□□□□□ -1.36
MSH3-201ENST00000265081 CIRBP-AS1Q8TBR5 109 aa6.57□□□□□ -1.36
MSH3-201ENST00000265081 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
MSH3-201ENST00000265081 A0A1B0GVX0 72 aa6.57□□□□□ -1.36
MSH3-201ENST00000265081 PKHD1L1Q86WI1 4243 aa6.56□□□□□ -1.36
MSH3-201ENST00000265081 C8orf17Q9NRJ1 99 aa6.56□□□□□ -1.36
MSH3-201ENST00000265081 LY6G6CO95867 125 aa6.56□□□□□ -1.36
MSH3-201ENST00000265081 FAM229BQ4G0N7 80 aa6.55□□□□□ -1.36
MSH3-201ENST00000265081 TP53AIP1Q9HCN2 124 aa6.55□□□□□ -1.36
MSH3-201ENST00000265081 C4orf26Q17RF5 130 aa6.55□□□□□ -1.36
MSH3-201ENST00000265081 SSBP3-AS1Q7Z2R9 100 aa6.55□□□□□ -1.36
MSH3-201ENST00000265081 MP68P56378 58 aa6.54□□□□□ -1.36
MSH3-201ENST00000265081 H0Y9P7 68 aa6.53□□□□□ -1.36
MSH3-201ENST00000265081 ANAPC11Q9NYG5 84 aa6.53□□□□□ -1.36
MSH3-201ENST00000265081 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms