RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ATP5EP56381 51 aaPredicted RBP12.76□□□□□ -0.37
CSPG5-201ENST00000264723 CASC2Q6XLA1 102 aa12.75□□□□□ -0.37
CSPG5-201ENST00000264723 KLKP1Q107X0 134 aa12.75□□□□□ -0.37
CSPG5-201ENST00000264723 RTL8CO15255 209 aa12.75□□□□□ -0.37
CSPG5-201ENST00000264723 BCE1O60756 84 aa12.74□□□□□ -0.37
CSPG5-201ENST00000264723 MOBPQ13875 183 aa12.73□□□□□ -0.37
CSPG5-201ENST00000264723 PCOTHQ58A44 107 aa12.73□□□□□ -0.37
CSPG5-201ENST00000264723 OXTP01178 125 aa12.7□□□□□ -0.38
CSPG5-201ENST00000264723 KRTAP26-1Q6PEX3 210 aa12.68□□□□□ -0.38
CSPG5-201ENST00000264723 IGFL1Q6UW32 110 aa12.68□□□□□ -0.38
CSPG5-201ENST00000264723 APLNQ9ULZ1 77 aa12.68□□□□□ -0.38
CSPG5-201ENST00000264723 H0Y9P7 68 aa12.67□□□□□ -0.38
CSPG5-201ENST00000264723 CHKB-CPT1BH3BT56 60 aa12.67□□□□□ -0.38
CSPG5-201ENST00000264723 SPTSSBQ8NFR3 76 aa12.67□□□□□ -0.38
CSPG5-201ENST00000264723 RETNLBQ9BQ08 111 aa12.66□□□□□ -0.38
CSPG5-201ENST00000264723 ZNF469Q96JG9 3925 aaPredicted RBP12.65□□□□□ -0.38
CSPG5-201ENST00000264723 C9orf163Q8N9P6 203 aa12.64□□□□□ -0.39
CSPG5-201ENST00000264723 LINC00336Q6ZUF6 198 aa12.63□□□□□ -0.39
CSPG5-201ENST00000264723 TLX1NBP0CAT3 122 aa12.63□□□□□ -0.39
CSPG5-201ENST00000264723 ANAPC11Q9NYG5 84 aa12.63□□□□□ -0.39
CSPG5-201ENST00000264723 IGLV5-48A0A075B6I7 105 aa12.61□□□□□ -0.39
CSPG5-201ENST00000264723 TRRAPQ9Y4A5 3859 aa12.59□□□□□ -0.39
CSPG5-201ENST00000264723 A0A087WTM6 91 aa12.58□□□□□ -0.4
CSPG5-201ENST00000264723 C1orf64Q8NEQ6 169 aa12.57□□□□□ -0.4
CSPG5-201ENST00000264723 KRTAP1-5Q9BYS1 174 aa12.57□□□□□ -0.4
CSPG5-201ENST00000264723 OCR1Q9BZK8 76 aa12.57□□□□□ -0.4
CSPG5-201ENST00000264723 DSCR10P59022 87 aa12.54□□□□□ -0.4
CSPG5-201ENST00000264723 PLA2G2DQ9UNK4 145 aa12.52□□□□□ -0.41
CSPG5-201ENST00000264723 PRO0628Q9UI54 55 aa12.52□□□□□ -0.41
CSPG5-201ENST00000264723 Q5XG85 94 aa12.51□□□□□ -0.41
CSPG5-201ENST00000264723 WWC2-AS2Q96NR7 200 aa12.5□□□□□ -0.41
CSPG5-201ENST00000264723 SPACA4Q8TDM5 124 aa12.5□□□□□ -0.41
CSPG5-201ENST00000264723 PRR15LQ9BU68 103 aa12.5□□□□□ -0.41
CSPG5-201ENST00000264723 CNBPP62633 177 aaKnown RBP12.49□□□□□ -0.41
CSPG5-201ENST00000264723 V9GYY9 64 aa12.49□□□□□ -0.41
CSPG5-201ENST00000264723 A0A1B0GW54 56 aa12.48□□□□□ -0.41
CSPG5-201ENST00000264723 C1orf195Q5TG92 126 aa12.48□□□□□ -0.41
CSPG5-201ENST00000264723 A6NED7 52 aa12.47□□□□□ -0.41
CSPG5-201ENST00000264723 FAM229BQ4G0N7 80 aa12.47□□□□□ -0.41
CSPG5-201ENST00000264723 hDV103S1A0JD37 113 aa12.47□□□□□ -0.41
CSPG5-201ENST00000264723 PSORS1C2Q9UIG4 136 aa12.44□□□□□ -0.42
CSPG5-201ENST00000264723 TENM2Q9NT68 2774 aa12.44□□□□□ -0.42
CSPG5-201ENST00000264723 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.44□□□□□ -0.42
CSPG5-201ENST00000264723 FP248Q71RG6 208 aaPredicted RBP12.43□□□□□ -0.42
CSPG5-201ENST00000264723 SPRR1AP35321 89 aa12.4□□□□□ -0.42
CSPG5-201ENST00000264723 IGLV5-37A0A075B6J1 123 aa12.4□□□□□ -0.42
CSPG5-201ENST00000264723 A8MUN3 132 aa12.4□□□□□ -0.42
CSPG5-201ENST00000264723 PRR15Q8IV56 129 aa12.39□□□□□ -0.43
CSPG5-201ENST00000264723 SPRR4Q96PI1 79 aa12.39□□□□□ -0.43
CSPG5-201ENST00000264723 A8MWP4 228 aa12.39□□□□□ -0.43
CSPG5-201ENST00000264723 TNP2Q05952 138 aa12.38□□□□□ -0.43
CSPG5-201ENST00000264723 TRAV22A0A0B4J277 110 aa12.37□□□□□ -0.43
CSPG5-201ENST00000264723 ZNF861PO60384 105 aa12.37□□□□□ -0.43
CSPG5-201ENST00000264723 KRTAP7-1Q8IUC3 87 aa12.36□□□□□ -0.43
CSPG5-201ENST00000264723 PMAIP1Q13794 54 aa12.35□□□□□ -0.43
CSPG5-201ENST00000264723 SMR3BP02814 79 aaPredicted RBP12.33□□□□□ -0.44
CSPG5-201ENST00000264723 SPAG11AQ6PDA7 123 aa12.33□□□□□ -0.44
CSPG5-201ENST00000264723 KRTAP4-16G5E9R7 235 aaPredicted RBP12.33□□□□□ -0.44
CSPG5-201ENST00000264723 IGKV2D-30A0A075B6S6 120 aa12.31□□□□□ -0.44
CSPG5-201ENST00000264723 IGKV2-30P06310 120 aa12.31□□□□□ -0.44
CSPG5-201ENST00000264723 PLA2G1BP04054 148 aaKnown RBP12.28□□□□□ -0.44
CSPG5-201ENST00000264723 TYMSOSQ8TAI1 123 aa12.27□□□□□ -0.45
CSPG5-201ENST00000264723 SPINK1P00995 79 aa12.25□□□□□ -0.45
CSPG5-201ENST00000264723 KRTAP11-1Q8IUC1 163 aa12.25□□□□□ -0.45
CSPG5-201ENST00000264723 PANO1I0J062 215 aa12.24□□□□□ -0.45
CSPG5-201ENST00000264723 ANK3Q12955 4377 aaKnown RBP12.24□□□□□ -0.45
CSPG5-201ENST00000264723 IGLV7-43P04211 117 aa12.23□□□□□ -0.45
CSPG5-201ENST00000264723 LIMD2Q9BT23 127 aa12.21□□□□□ -0.45
CSPG5-201ENST00000264723 C8orf17Q9NRJ1 99 aa12.2□□□□□ -0.46
CSPG5-201ENST00000264723 COA5Q86WW8 74 aa12.19□□□□□ -0.46
CSPG5-201ENST00000264723 SRRM2Q9UQ35 2752 aaKnown RBP12.19□□□□□ -0.46
CSPG5-201ENST00000264723 LINC00313P59037 77 aa12.18□□□□□ -0.46
CSPG5-201ENST00000264723 TP53AIP1Q9HCN2 124 aa12.18□□□□□ -0.46
CSPG5-201ENST00000264723 SEC61GP60059 68 aa12.17□□□□□ -0.46
CSPG5-201ENST00000264723 AKAP9Q99996 3911 aa12.15□□□□□ -0.46
CSPG5-201ENST00000264723 MRPL34Q9BQ48 92 aaKnown RBP12.15□□□□□ -0.46
CSPG5-201ENST00000264723 TGP01266 2768 aa12.14□□□□□ -0.47
CSPG5-201ENST00000264723 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
CSPG5-201ENST00000264723 H3BPC8 53 aa12.12□□□□□ -0.47
CSPG5-201ENST00000264723 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
CSPG5-201ENST00000264723 SSBP3-AS1Q7Z2R9 100 aa12.09□□□□□ -0.47
CSPG5-201ENST00000264723 Q96NJ1 140 aa12.08□□□□□ -0.48
CSPG5-201ENST00000264723 LINC00472Q9H8W2 130 aa12.08□□□□□ -0.48
CSPG5-201ENST00000264723 MMP24-AS1A0A0U1RRL7 71 aa12.05□□□□□ -0.48
CSPG5-201ENST00000264723 IGLV8-61A0A075B6I0 122 aa12.01□□□□□ -0.49
CSPG5-201ENST00000264723 KRTAP10-2P60368 255 aa12□□□□□ -0.49
CSPG5-201ENST00000264723 PRR26Q8N8Z3 221 aa11.99□□□□□ -0.49
CSPG5-201ENST00000264723 PLAC8Q9NZF1 115 aa11.98□□□□□ -0.49
CSPG5-201ENST00000264723 FAM229AH3BQW9 127 aa11.98□□□□□ -0.49
CSPG5-201ENST00000264723 CYP4F30PQ9H0H9 118 aa11.97□□□□□ -0.49
CSPG5-201ENST00000264723 C7orf65Q6ZTY9 151 aa11.97□□□□□ -0.49
CSPG5-201ENST00000264723 C9orf92A6NGG3 77 aa11.96□□□□□ -0.5
CSPG5-201ENST00000264723 Q1T7F1 81 aa11.96□□□□□ -0.5
CSPG5-201ENST00000264723 SPRR1BP22528 89 aa11.95□□□□□ -0.5
CSPG5-201ENST00000264723 CSMD3Q7Z407 3707 aa11.95□□□□□ -0.5
CSPG5-201ENST00000264723 ZCCHC13Q8WW36 166 aaKnown RBP11.94□□□□□ -0.5
CSPG5-201ENST00000264723 LINC00304Q8N9R0 145 aa11.94□□□□□ -0.5
CSPG5-201ENST00000264723 KRTAP29-1A8MX34 341 aaPredicted RBP11.93□□□□□ -0.5
CSPG5-201ENST00000264723 SPANXA2-OT1Q8N9U9 137 aa11.92□□□□□ -0.5
CSPG5-201ENST00000264723 CD164Q04900 197 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms