RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 Q6ZRN7 208 aaPredicted RBP12.21□□□□□ -0.45
COL4A3BP-201ENST00000261415 HYDINQ4G0P3 5121 aa12.21□□□□□ -0.46
COL4A3BP-201ENST00000261415 SMIM29Q86T20 159 aa12.21□□□□□ -0.46
COL4A3BP-201ENST00000261415 DNAH2Q9P225 4427 aa12.2□□□□□ -0.46
COL4A3BP-201ENST00000261415 M0R378 163 aa12.2□□□□□ -0.46
COL4A3BP-201ENST00000261415 Q5VV11 94 aa12.2□□□□□ -0.46
COL4A3BP-201ENST00000261415 NDUFB1O75438 58 aa12.2□□□□□ -0.46
COL4A3BP-201ENST00000261415 C9orf116Q5BN46 136 aaPredicted RBP12.18□□□□□ -0.46
COL4A3BP-201ENST00000261415 UNQ6190/PRO20217Q6UXQ8 127 aa12.18□□□□□ -0.46
COL4A3BP-201ENST00000261415 C10orf25Q5T742 122 aa12.17□□□□□ -0.46
COL4A3BP-201ENST00000261415 ATP11AUNQ6ZP68 121 aa12.17□□□□□ -0.46
COL4A3BP-201ENST00000261415 CAMK2N2Q96S95 79 aa12.17□□□□□ -0.46
COL4A3BP-201ENST00000261415 LIMD2Q9BT23 127 aa12.17□□□□□ -0.46
COL4A3BP-201ENST00000261415 ETDCA0A1B0GVM5 59 aa12.16□□□□□ -0.46
COL4A3BP-201ENST00000261415 ELOF1P60002 83 aaKnown RBP12.16□□□□□ -0.46
COL4A3BP-201ENST00000261415 A0A1B0GW54 56 aa12.16□□□□□ -0.46
COL4A3BP-201ENST00000261415 PHF5AQ7RTV0 110 aaKnown RBP12.16□□□□□ -0.46
COL4A3BP-201ENST00000261415 SACSQ9NZJ4 4579 aa12.15□□□□□ -0.46
COL4A3BP-201ENST00000261415 ZNF73O43830 326 aaPredicted RBP12.15□□□□□ -0.46
COL4A3BP-201ENST00000261415 C1orf134Q5TEV5 83 aa12.13□□□□□ -0.47
COL4A3BP-201ENST00000261415 C6orf48Q9UBA6 75 aa12.13□□□□□ -0.47
COL4A3BP-201ENST00000261415 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
COL4A3BP-201ENST00000261415 CHKB-CPT1BH3BT56 60 aa12.13□□□□□ -0.47
COL4A3BP-201ENST00000261415 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
COL4A3BP-201ENST00000261415 A8MU10 97 aa12.1□□□□□ -0.47
COL4A3BP-201ENST00000261415 C4orf48Q5BLP8 95 aa12.1□□□□□ -0.47
COL4A3BP-201ENST00000261415 FRAS1Q86XX4 4008 aa12.1□□□□□ -0.47
COL4A3BP-201ENST00000261415 C14orf177Q52M58 125 aa12.09□□□□□ -0.47
COL4A3BP-201ENST00000261415 DNAH17Q9UFH2 4485 aa12.08□□□□□ -0.48
COL4A3BP-201ENST00000261415 HCG22E2RYF7 251 aa12.08□□□□□ -0.48
COL4A3BP-201ENST00000261415 SPTSSBQ8NFR3 76 aa12.07□□□□□ -0.48
COL4A3BP-201ENST00000261415 Q8N9P0 234 aaPredicted RBP12.06□□□□□ -0.48
COL4A3BP-201ENST00000261415 A0A087WTM6 91 aa12.05□□□□□ -0.48
COL4A3BP-201ENST00000261415 A6NN06 94 aa12.04□□□□□ -0.48
COL4A3BP-201ENST00000261415 CNBPP62633 177 aaKnown RBP12.04□□□□□ -0.48
COL4A3BP-201ENST00000261415 PRR4Q16378 134 aa12.04□□□□□ -0.48
COL4A3BP-201ENST00000261415 RTL8CO15255 209 aa12.01□□□□□ -0.49
COL4A3BP-201ENST00000261415 Q75L30 129 aa12.01□□□□□ -0.49
COL4A3BP-201ENST00000261415 LINC00528Q8N1L1 170 aa12.01□□□□□ -0.49
COL4A3BP-201ENST00000261415 KMT2CQ8NEZ4 4911 aaKnown RBP12.01□□□□□ -0.49
COL4A3BP-201ENST00000261415 SPANXA2-OT1Q8N9U9 137 aa12□□□□□ -0.49
COL4A3BP-201ENST00000261415 PRR15LQ9BU68 103 aa12□□□□□ -0.49
COL4A3BP-201ENST00000261415 C7orf65Q6ZTY9 151 aa11.99□□□□□ -0.49
COL4A3BP-201ENST00000261415 Q9BRP9 147 aa11.99□□□□□ -0.49
COL4A3BP-201ENST00000261415 IGLV5-48A0A075B6I7 105 aa11.99□□□□□ -0.49
COL4A3BP-201ENST00000261415 TNP2Q05952 138 aa11.99□□□□□ -0.49
COL4A3BP-201ENST00000261415 TLX1NBP0CAT3 122 aa11.98□□□□□ -0.49
COL4A3BP-201ENST00000261415 LCA10Q71F78 164 aa11.98□□□□□ -0.49
COL4A3BP-201ENST00000261415 LINC00208Q96KT6 92 aa11.98□□□□□ -0.49
COL4A3BP-201ENST00000261415 MP68P56378 58 aa11.98□□□□□ -0.49
COL4A3BP-201ENST00000261415 RYR2Q92736 4967 aa11.98□□□□□ -0.49
COL4A3BP-201ENST00000261415 ST20-AS1Q8NBB2 130 aa11.97□□□□□ -0.49
COL4A3BP-201ENST00000261415 HECTD4Q9Y4D8 3996 aa11.97□□□□□ -0.49
COL4A3BP-201ENST00000261415 XAGE1AQ9HD64 81 aa11.97□□□□□ -0.49
COL4A3BP-201ENST00000261415 A6NED7 52 aa11.95□□□□□ -0.5
COL4A3BP-201ENST00000261415 FAT2Q9NYQ8 4349 aa11.95□□□□□ -0.5
COL4A3BP-201ENST00000261415 LOC101927531A0A1B0GV80 90 aa11.95□□□□□ -0.5
COL4A3BP-201ENST00000261415 C9orf163Q8N9P6 203 aa11.94□□□□□ -0.5
COL4A3BP-201ENST00000261415 KCNQ1DNQ9H478 68 aa11.94□□□□□ -0.5
COL4A3BP-201ENST00000261415 CDC42SE1Q9NRR8 79 aa11.94□□□□□ -0.5
COL4A3BP-201ENST00000261415 VPREB1P12018 145 aa11.92□□□□□ -0.5
COL4A3BP-201ENST00000261415 DSCR10P59022 87 aa11.92□□□□□ -0.5
COL4A3BP-201ENST00000261415 DNAH11Q96DT5 4516 aa11.92□□□□□ -0.5
COL4A3BP-201ENST00000261415 H3BPC8 53 aa11.9□□□□□ -0.5
COL4A3BP-201ENST00000261415 A0A096LNI7 61 aa11.88□□□□□ -0.51
COL4A3BP-201ENST00000261415 K7EQZ3 153 aa11.88□□□□□ -0.51
COL4A3BP-201ENST00000261415 A0A1W2PNM2 257 aa11.88□□□□□ -0.51
COL4A3BP-201ENST00000261415 PKD1P98161 4303 aa11.87□□□□□ -0.51
COL4A3BP-201ENST00000261415 C8orf87E5RJ46 101 aa11.87□□□□□ -0.51
COL4A3BP-201ENST00000261415 Q8N377 158 aa11.87□□□□□ -0.51
COL4A3BP-201ENST00000261415 IGLV5-52A0A0A0MRZ9 124 aa11.86□□□□□ -0.51
COL4A3BP-201ENST00000261415 Q8NBF4 154 aa11.86□□□□□ -0.51
COL4A3BP-201ENST00000261415 SPRR4Q96PI1 79 aa11.86□□□□□ -0.51
COL4A3BP-201ENST00000261415 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
COL4A3BP-201ENST00000261415 DNAH5Q8TE73 4624 aa11.85□□□□□ -0.51
COL4A3BP-201ENST00000261415 KRTAP10-2P60368 255 aa11.84□□□□□ -0.51
COL4A3BP-201ENST00000261415 C1orf137Q5JT78 98 aa11.83□□□□□ -0.52
COL4A3BP-201ENST00000261415 DEFB105AQ8NG35 78 aa11.83□□□□□ -0.52
COL4A3BP-201ENST00000261415 FAM168BA1KXE4 195 aa11.83□□□□□ -0.52
COL4A3BP-201ENST00000261415 CHTF8P0CG12 524 aa11.83□□□□□ -0.52
COL4A3BP-201ENST00000261415 SERTAD4-AS1Q5TG53 156 aa11.83□□□□□ -0.52
COL4A3BP-201ENST00000261415 PLA2G2DQ9UNK4 145 aa11.82□□□□□ -0.52
COL4A3BP-201ENST00000261415 KRTAP7-1Q8IUC3 87 aa11.79□□□□□ -0.52
COL4A3BP-201ENST00000261415 MOBPQ13875 183 aa11.79□□□□□ -0.52
COL4A3BP-201ENST00000261415 NKAPP1Q8N9T2 125 aa11.78□□□□□ -0.52
COL4A3BP-201ENST00000261415 RYR3Q15413 4870 aa11.78□□□□□ -0.52
COL4A3BP-201ENST00000261415 PANO1I0J062 215 aa11.77□□□□□ -0.52
COL4A3BP-201ENST00000261415 DHRS4-AS1Q9P1J3 65 aa11.77□□□□□ -0.53
COL4A3BP-201ENST00000261415 IGLV5-37A0A075B6J1 123 aa11.76□□□□□ -0.53
COL4A3BP-201ENST00000261415 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.76□□□□□ -0.53
COL4A3BP-201ENST00000261415 A0A1W2PNN7 141 aa11.75□□□□□ -0.53
COL4A3BP-201ENST00000261415 SPACA4Q8TDM5 124 aa11.75□□□□□ -0.53
COL4A3BP-201ENST00000261415 H0Y9P7 68 aa11.74□□□□□ -0.53
COL4A3BP-201ENST00000261415 COA5Q86WW8 74 aa11.74□□□□□ -0.53
COL4A3BP-201ENST00000261415 C7orf33Q8WU49 177 aa11.73□□□□□ -0.53
COL4A3BP-201ENST00000261415 LINC01558Q9Y6Z2 57 aa11.72□□□□□ -0.53
COL4A3BP-201ENST00000261415 PKHD1P08F94 4074 aa11.72□□□□□ -0.53
COL4A3BP-201ENST00000261415 WFDC13Q8IUB5 93 aa11.7□□□□□ -0.54
COL4A3BP-201ENST00000261415 A0A1B0GVY2 172 aa11.7□□□□□ -0.54
COL4A3BP-201ENST00000261415 DNAH8Q96JB1 4490 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms