RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 UBE2BP63146 152 aa8.98□□□□□ -0.97
SF1-201ENST00000227503 B9D2Q9BPU9 175 aa8.98□□□□□ -0.97
SF1-201ENST00000227503 C16orf90A8MZG2 172 aa8.98□□□□□ -0.97
SF1-201ENST00000227503 SPRR4Q96PI1 79 aa8.97□□□□□ -0.97
SF1-201ENST00000227503 LINC00476Q8WZB0 136 aa8.96□□□□□ -0.97
SF1-201ENST00000227503 C11orf45Q8TAV5 145 aa8.96□□□□□ -0.98
SF1-201ENST00000227503 DNAH10OSP0CZ25 163 aa8.95□□□□□ -0.98
SF1-201ENST00000227503 DHRS4-AS1Q9P1J3 65 aa8.95□□□□□ -0.98
SF1-201ENST00000227503 A0A087WSZ3 146 aa8.94□□□□□ -0.98
SF1-201ENST00000227503 KRTAP4-16G5E9R7 235 aaPredicted RBP8.94□□□□□ -0.98
SF1-201ENST00000227503 MP68P56378 58 aa8.94□□□□□ -0.98
SF1-201ENST00000227503 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
SF1-201ENST00000227503 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
SF1-201ENST00000227503 CASC10Q5T4H9 136 aa8.93□□□□□ -0.98
SF1-201ENST00000227503 TLX1NBP0CAT3 122 aa8.92□□□□□ -0.98
SF1-201ENST00000227503 IGLV1-50A0A075B6I6 118 aa8.92□□□□□ -0.98
SF1-201ENST00000227503 CD164Q04900 197 aa8.92□□□□□ -0.98
SF1-201ENST00000227503 LCA10Q71F78 164 aa8.92□□□□□ -0.98
SF1-201ENST00000227503 H0Y9P7 68 aa8.91□□□□□ -0.98
SF1-201ENST00000227503 IGFL1Q6UW32 110 aa8.91□□□□□ -0.98
SF1-201ENST00000227503 PLA2G2DQ9UNK4 145 aa8.91□□□□□ -0.98
SF1-201ENST00000227503 MGAM2Q2M2H8 2515 aa8.91□□□□□ -0.98
SF1-201ENST00000227503 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
SF1-201ENST00000227503 NDUFB1O75438 58 aa8.9□□□□□ -0.99
SF1-201ENST00000227503 KRTAP24-1Q3LI83 254 aa8.9□□□□□ -0.99
SF1-201ENST00000227503 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
SF1-201ENST00000227503 A6NED7 52 aa8.89□□□□□ -0.99
SF1-201ENST00000227503 UBE2AP49459 152 aa8.89□□□□□ -0.99
SF1-201ENST00000227503 PRLHP81277 87 aa8.88□□□□□ -0.99
SF1-201ENST00000227503 COL7A1Q02388 2944 aa8.88□□□□□ -0.99
SF1-201ENST00000227503 IGLV5-37A0A075B6J1 123 aa8.87□□□□□ -0.99
SF1-201ENST00000227503 MRPL55Q7Z7F7 128 aaKnown RBP8.87□□□□□ -0.99
SF1-201ENST00000227503 HUWE1Q7Z6Z7 4374 aaKnown RBP8.86□□□□□ -0.99
SF1-201ENST00000227503 SPRR1AP35321 89 aa8.86□□□□□ -0.99
SF1-201ENST00000227503 A0A1B0GW54 56 aa8.86□□□□□ -0.99
SF1-201ENST00000227503 KTN1-AS1Q86SY8 53 aa8.86□□□□□ -0.99
SF1-201ENST00000227503 CASC2Q6XLA1 102 aa8.85□□□□□ -0.99
SF1-201ENST00000227503 PCOTHQ58A44 107 aa8.84□□□□□ -0.99
SF1-201ENST00000227503 A0A096LNI7 61 aa8.84□□□□□ -0.99
SF1-201ENST00000227503 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
SF1-201ENST00000227503 KRTAP29-1A8MX34 341 aaPredicted RBP8.83□□□□□ -1
SF1-201ENST00000227503 LIMD2Q9BT23 127 aa8.83□□□□□ -1
SF1-201ENST00000227503 CNBPP62633 177 aaKnown RBP8.82□□□□□ -1
SF1-201ENST00000227503 COA5Q86WW8 74 aa8.82□□□□□ -1
SF1-201ENST00000227503 DNAH10Q8IVF4 4471 aa8.82□□□□□ -1
SF1-201ENST00000227503 SPAG11AQ6PDA7 123 aa8.8□□□□□ -1
SF1-201ENST00000227503 REG3GQ6UW15 175 aa8.8□□□□□ -1
SF1-201ENST00000227503 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
SF1-201ENST00000227503 C9orf163Q8N9P6 203 aa8.78□□□□□ -1
SF1-201ENST00000227503 A6NN06 94 aa8.77□□□□□ -1.01
SF1-201ENST00000227503 SPANXA2-OT1Q8N9U9 137 aa8.77□□□□□ -1.01
SF1-201ENST00000227503 LYSTQ99698 3801 aa8.76□□□□□ -1.01
SF1-201ENST00000227503 H0Y9J4 135 aa8.76□□□□□ -1.01
SF1-201ENST00000227503 Q75L30 129 aa8.76□□□□□ -1.01
SF1-201ENST00000227503 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
SF1-201ENST00000227503 SPINK7P58062 85 aa8.73□□□□□ -1.01
SF1-201ENST00000227503 MOBPQ13875 183 aa8.72□□□□□ -1.01
SF1-201ENST00000227503 STAB2Q8WWQ8 2551 aa8.72□□□□□ -1.01
SF1-201ENST00000227503 DNAH9Q9NYC9 4486 aa8.71□□□□□ -1.01
SF1-201ENST00000227503 K7EIL1 84 aa8.71□□□□□ -1.02
SF1-201ENST00000227503 LOC101927531A0A1B0GV80 90 aa8.71□□□□□ -1.02
SF1-201ENST00000227503 KRTAP11-1Q8IUC1 163 aa8.7□□□□□ -1.02
SF1-201ENST00000227503 A8MWP4 228 aa8.69□□□□□ -1.02
SF1-201ENST00000227503 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
SF1-201ENST00000227503 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
SF1-201ENST00000227503 LINC00472Q9H8W2 130 aa8.67□□□□□ -1.02
SF1-201ENST00000227503 IGLV7-46A0A075B6I9 117 aa8.67□□□□□ -1.02
SF1-201ENST00000227503 MMP24-AS1A0A0U1RRL7 71 aa8.67□□□□□ -1.02
SF1-201ENST00000227503 H3BPC8 53 aa8.65□□□□□ -1.02
SF1-201ENST00000227503 CHTF8P0CG12 524 aa8.65□□□□□ -1.03
SF1-201ENST00000227503 NDUFS5O43920 106 aa8.64□□□□□ -1.03
SF1-201ENST00000227503 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
SF1-201ENST00000227503 PRAC1Q96KF2 57 aa8.64□□□□□ -1.03
SF1-201ENST00000227503 DYNC2H1Q8NCM8 4307 aaKnown RBP8.64□□□□□ -1.03
SF1-201ENST00000227503 C7orf65Q6ZTY9 151 aa8.63□□□□□ -1.03
SF1-201ENST00000227503 IGLV8-61A0A075B6I0 122 aa8.63□□□□□ -1.03
SF1-201ENST00000227503 HRES1P13985 223 aa8.61□□□□□ -1.03
SF1-201ENST00000227503 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
SF1-201ENST00000227503 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
SF1-201ENST00000227503 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
SF1-201ENST00000227503 PLAC8Q9NZF1 115 aa8.57□□□□□ -1.04
SF1-201ENST00000227503 DNAH7Q8WXX0 4024 aa8.56□□□□□ -1.04
SF1-201ENST00000227503 IGLV9-49A0A0B4J1Y8 123 aa8.56□□□□□ -1.04
SF1-201ENST00000227503 APLNQ9ULZ1 77 aa8.56□□□□□ -1.04
SF1-201ENST00000227503 IGHV6-1A0A0B4J1U7 121 aa8.55□□□□□ -1.04
SF1-201ENST00000227503 PLECQ15149 4684 aaKnown RBP8.55□□□□□ -1.04
SF1-201ENST00000227503 LINC00313P59037 77 aa8.54□□□□□ -1.04
SF1-201ENST00000227503 UBE2DNLQ8IWF7 75 aa8.54□□□□□ -1.04
SF1-201ENST00000227503 A0A087X002 238 aa8.53□□□□□ -1.04
SF1-201ENST00000227503 SPRR1BP22528 89 aa8.53□□□□□ -1.04
SF1-201ENST00000227503 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
SF1-201ENST00000227503 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
SF1-201ENST00000227503 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
SF1-201ENST00000227503 Q96NJ1 140 aa8.51□□□□□ -1.05
SF1-201ENST00000227503 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
SF1-201ENST00000227503 MDFIQ99750 246 aa8.48□□□□□ -1.05
SF1-201ENST00000227503 Q6ZR54 194 aa8.47□□□□□ -1.05
SF1-201ENST00000227503 FRAS1Q86XX4 4008 aa8.47□□□□□ -1.05
SF1-201ENST00000227503 PANO1I0J062 215 aa8.46□□□□□ -1.05
SF1-201ENST00000227503 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms