RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 SPRR1BP22528 89 aa13.19□□□□□ -0.3
CCDC130-201ENST00000221554 SNURFQ9Y675 71 aa13.19□□□□□ -0.3
CCDC130-201ENST00000221554 IGFL1Q6UW32 110 aa13.18□□□□□ -0.3
CCDC130-201ENST00000221554 UBE2AP49459 152 aa13.17□□□□□ -0.3
CCDC130-201ENST00000221554 PHF5AQ7RTV0 110 aaKnown RBP13.15□□□□□ -0.3
CCDC130-201ENST00000221554 SERP1Q9Y6X1 66 aa13.15□□□□□ -0.3
CCDC130-201ENST00000221554 DSCR10P59022 87 aa13.15□□□□□ -0.31
CCDC130-201ENST00000221554 EPM2AB3EWF7 344 aa13.14□□□□□ -0.31
CCDC130-201ENST00000221554 CHTF8P0CG12 524 aa13.12□□□□□ -0.31
CCDC130-201ENST00000221554 Q6ZRN7 208 aaPredicted RBP13.12□□□□□ -0.31
CCDC130-201ENST00000221554 DNAH7Q8WXX0 4024 aa13.11□□□□□ -0.31
CCDC130-201ENST00000221554 A0A0U1RQV1 116 aa13.1□□□□□ -0.31
CCDC130-201ENST00000221554 CSMD3Q7Z407 3707 aa13.08□□□□□ -0.32
CCDC130-201ENST00000221554 LCE6AA0A183 80 aa13.07□□□□□ -0.32
CCDC130-201ENST00000221554 K7EQZ3 153 aa13.07□□□□□ -0.32
CCDC130-201ENST00000221554 TENM2Q9NT68 2774 aa13.06□□□□□ -0.32
CCDC130-201ENST00000221554 KRTAP11-1Q8IUC1 163 aa13.05□□□□□ -0.32
CCDC130-201ENST00000221554 A0A087WSZ3 146 aa13.04□□□□□ -0.32
CCDC130-201ENST00000221554 HCG22E2RYF7 251 aa13.04□□□□□ -0.32
CCDC130-201ENST00000221554 OXTP01178 125 aa13.04□□□□□ -0.32
CCDC130-201ENST00000221554 FAM30AQ9NZY2 134 aa13.02□□□□□ -0.32
CCDC130-201ENST00000221554 DYNC2H1Q8NCM8 4307 aaKnown RBP13.02□□□□□ -0.33
CCDC130-201ENST00000221554 C5orf47Q569G3 176 aa13.01□□□□□ -0.33
CCDC130-201ENST00000221554 KRTAP13-1Q8IUC0 172 aa13□□□□□ -0.33
CCDC130-201ENST00000221554 SPACA4Q8TDM5 124 aa13□□□□□ -0.33
CCDC130-201ENST00000221554 A0A0G2JQZ4 141 aa12.97□□□□□ -0.33
CCDC130-201ENST00000221554 A0A087WTM6 91 aa12.96□□□□□ -0.34
CCDC130-201ENST00000221554 RPL37AP61513 92 aaKnown RBP12.95□□□□□ -0.34
CCDC130-201ENST00000221554 STARD9Q9P2P6 4700 aa12.95□□□□□ -0.34
CCDC130-201ENST00000221554 SMIM26A0A096LP01 95 aa12.93□□□□□ -0.34
CCDC130-201ENST00000221554 PANO1I0J062 215 aa12.92□□□□□ -0.34
CCDC130-201ENST00000221554 ZNF706Q9Y5V0 76 aaPredicted RBP12.92□□□□□ -0.34
CCDC130-201ENST00000221554 A8MWP4 228 aa12.9□□□□□ -0.34
CCDC130-201ENST00000221554 Q5XG85 94 aa12.9□□□□□ -0.34
CCDC130-201ENST00000221554 LINC00472Q9H8W2 130 aa12.9□□□□□ -0.34
CCDC130-201ENST00000221554 PRR15Q8IV56 129 aa12.89□□□□□ -0.35
CCDC130-201ENST00000221554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.89□□□□□ -0.35
CCDC130-201ENST00000221554 DEFB116Q30KQ4 102 aa12.89□□□□□ -0.35
CCDC130-201ENST00000221554 ZCCHC13Q8WW36 166 aaKnown RBP12.89□□□□□ -0.35
CCDC130-201ENST00000221554 WWC2-AS2Q96NR7 200 aa12.89□□□□□ -0.35
CCDC130-201ENST00000221554 LINC00483Q53H64 154 aa12.87□□□□□ -0.35
CCDC130-201ENST00000221554 DNAH10Q8IVF4 4471 aa12.87□□□□□ -0.35
CCDC130-201ENST00000221554 Q6ZR54 194 aa12.86□□□□□ -0.35
CCDC130-201ENST00000221554 PLECQ15149 4684 aaKnown RBP12.86□□□□□ -0.35
CCDC130-201ENST00000221554 KRTAP29-1A8MX34 341 aaPredicted RBP12.86□□□□□ -0.35
CCDC130-201ENST00000221554 RTL8CO15255 209 aa12.86□□□□□ -0.35
CCDC130-201ENST00000221554 NDUFB1O75438 58 aa12.84□□□□□ -0.35
CCDC130-201ENST00000221554 MP68P56378 58 aa12.84□□□□□ -0.35
CCDC130-201ENST00000221554 WFDC13Q8IUB5 93 aa12.84□□□□□ -0.35
CCDC130-201ENST00000221554 LYSTQ99698 3801 aa12.84□□□□□ -0.35
CCDC130-201ENST00000221554 CASC2Q6XLA1 102 aa12.83□□□□□ -0.36
CCDC130-201ENST00000221554 PLAC8Q9NZF1 115 aa12.83□□□□□ -0.36
CCDC130-201ENST00000221554 H3BPC8 53 aa12.82□□□□□ -0.36
CCDC130-201ENST00000221554 IGLV5-52A0A0A0MRZ9 124 aa12.8□□□□□ -0.36
CCDC130-201ENST00000221554 C4orf26Q17RF5 130 aa12.8□□□□□ -0.36
CCDC130-201ENST00000221554 C1orf134Q5TEV5 83 aa12.76□□□□□ -0.37
CCDC130-201ENST00000221554 PSORS1C2Q9UIG4 136 aa12.76□□□□□ -0.37
CCDC130-201ENST00000221554 IGLV9-49A0A0B4J1Y8 123 aa12.75□□□□□ -0.37
CCDC130-201ENST00000221554 ZNF861PO60384 105 aa12.75□□□□□ -0.37
CCDC130-201ENST00000221554 hDV103S1A0JD37 113 aa12.72□□□□□ -0.37
CCDC130-201ENST00000221554 FP248Q71RG6 208 aaPredicted RBP12.72□□□□□ -0.37
CCDC130-201ENST00000221554 HRCT1Q6UXD1 115 aa12.71□□□□□ -0.37
CCDC130-201ENST00000221554 CYP4F30PQ9H0H9 118 aa12.71□□□□□ -0.37
CCDC130-201ENST00000221554 VPS13DQ5THJ4 4388 aa12.69□□□□□ -0.38
CCDC130-201ENST00000221554 TRAV22A0A0B4J277 110 aa12.68□□□□□ -0.38
CCDC130-201ENST00000221554 MMP24-AS1A0A0U1RRL7 71 aa12.68□□□□□ -0.38
CCDC130-201ENST00000221554 H0Y9P7 68 aa12.68□□□□□ -0.38
CCDC130-201ENST00000221554 MOBPQ13875 183 aa12.67□□□□□ -0.38
CCDC130-201ENST00000221554 Q96NJ1 140 aa12.67□□□□□ -0.38
CCDC130-201ENST00000221554 LINC00208Q96KT6 92 aa12.66□□□□□ -0.38
CCDC130-201ENST00000221554 TP53AIP1Q9HCN2 124 aa12.66□□□□□ -0.38
CCDC130-201ENST00000221554 KMT2CQ8NEZ4 4911 aaKnown RBP12.65□□□□□ -0.38
CCDC130-201ENST00000221554 SPANXA2-OT1Q8N9U9 137 aa12.64□□□□□ -0.39
CCDC130-201ENST00000221554 ALMS1Q8TCU4 4167 aa12.63□□□□□ -0.39
CCDC130-201ENST00000221554 ASB16-AS1Q495Z4 193 aa12.63□□□□□ -0.39
CCDC130-201ENST00000221554 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
CCDC130-201ENST00000221554 CDK2AP2O75956 126 aa12.62□□□□□ -0.39
CCDC130-201ENST00000221554 C1orf64Q8NEQ6 169 aa12.61□□□□□ -0.39
CCDC130-201ENST00000221554 KMT2AQ03164 3969 aa12.61□□□□□ -0.39
CCDC130-201ENST00000221554 IGLV7-43P04211 117 aa12.6□□□□□ -0.39
CCDC130-201ENST00000221554 HYDINQ4G0P3 5121 aa12.59□□□□□ -0.39
CCDC130-201ENST00000221554 FAM229BQ4G0N7 80 aa12.58□□□□□ -0.39
CCDC130-201ENST00000221554 C8orf17Q9NRJ1 99 aa12.58□□□□□ -0.39
CCDC130-201ENST00000221554 A0A1B0GVX0 72 aa12.58□□□□□ -0.4
CCDC130-201ENST00000221554 LY6G6CO95867 125 aa12.57□□□□□ -0.4
CCDC130-201ENST00000221554 CD164Q04900 197 aa12.56□□□□□ -0.4
CCDC130-201ENST00000221554 SRRM2Q9UQ35 2752 aaKnown RBP12.54□□□□□ -0.4
CCDC130-201ENST00000221554 SSBP3-AS1Q7Z2R9 100 aa12.53□□□□□ -0.4
CCDC130-201ENST00000221554 DNAH6Q9C0G6 4158 aa12.51□□□□□ -0.41
CCDC130-201ENST00000221554 MPLKIPQ8TAP9 179 aa12.5□□□□□ -0.41
CCDC130-201ENST00000221554 Q1T7F1 81 aa12.49□□□□□ -0.41
CCDC130-201ENST00000221554 ANAPC11Q9NYG5 84 aa12.49□□□□□ -0.41
CCDC130-201ENST00000221554 IGHV6-1A0A0B4J1U7 121 aa12.48□□□□□ -0.41
CCDC130-201ENST00000221554 MRPL34Q9BQ48 92 aaKnown RBP12.47□□□□□ -0.41
CCDC130-201ENST00000221554 RYR2Q92736 4967 aa12.47□□□□□ -0.41
CCDC130-201ENST00000221554 DNAH17Q9UFH2 4485 aa12.45□□□□□ -0.42
CCDC130-201ENST00000221554 PRR4Q16378 134 aa12.44□□□□□ -0.42
CCDC130-201ENST00000221554 V9GYY9 64 aa12.44□□□□□ -0.42
CCDC130-201ENST00000221554 RYR3Q15413 4870 aa12.44□□□□□ -0.42
CCDC130-201ENST00000221554 LINC00336Q6ZUF6 198 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms