RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 P18526 117 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Tmem88bQ3TYP4 173 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Dkk4Q8VEJ3 221 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Mrpl16Q99N93 251 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Lypd8Q9D7S0 255 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Brwd1Q921C3 2304 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Ins1P01325 108 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 P01791 123 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 AdipoqQ60994 247 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Borcs7Q9CRC6 105 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Ighv6-7A0A0A6YWU3 119 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Q497N7 227 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Stxbp6Q8R3T5 210 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Olfr1367Q8VFG2 316 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Rbms1Q91W59 403 aaKnown RBP12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 4930412O13RikQ9D5M9 106 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Tmem177Q8BPE4 311 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Spink6Q8BT20 105 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 LbhQ9CX60 105 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 EppinQ9DA01 134 aa12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Ankhd1E9PUR0 2548 aaKnown RBP12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Rif1Q6PR54 2419 aaKnown RBP12.87□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm17430F6RSK3 157 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm21874J3QNZ6 232 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Cdkn1aP39689 159 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 YrdcQ3U5F4 280 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Olfr481Q8VGI5 312 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Plxdc1Q91ZV7 500 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Ighv5-16A0A0B4J1P4 117 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Trav7-1A0A0G2JEV5 112 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 P01630 113 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Hoxb4P10284 250 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm10188Q3V432 135 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Ttc28Q80XJ3 2450 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Trav14-3A0A075B607 120 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Plcxd2B2RXA1 340 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Olfr1185-ps1F6XP16 303 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 CrygcQ61597 174 aa12.86□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm4792Q569Q2 183 aa12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Timm23Q9WTQ8 209 aa12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gcn1E9PVA8 2671 aaKnown RBP12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Ca2P00920 260 aaKnown RBP12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Tmem95P0DJF3 176 aa12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Saa4P31532 130 aa12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Plp1P60202 277 aa12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Zfp874aQ8BX23 447 aa12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Iba57Q8CAK1 358 aaKnown RBP12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Fam24aQ8CF27 98 aa12.85□□□□□ -0.35
Trim28-201ENSMUST00000005705 Zfp950A0A0U1RQ46 609 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Try10Q792Z1 246 aaKnown RBP12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Ndufb3Q9CQZ6 104 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Slc25a39Q9D8K8 359 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Igfn1Q3KNY0 2849 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 BC107364E9Q5A2 140 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 9130213A22RikQ3V3T2 120 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Olfr1381Q7TQT4 311 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Olfr1373Q7TQT6 311 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 NpbQ8K4P1 119 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 C1qtnf4Q8R066 326 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Nat6Q9R123 314 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 AcanQ61282 2132 aaKnown RBP12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm12689Q8BQU9 117 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm26566Q8CAC1 153 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 1700008P02RikQ9DAJ8 175 aa12.84□□□□□ -0.35
Trim28-201ENSMUST00000005705 Fam240bJ3QMB3 78 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 CntfrO88507 372 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Fabp6P51162 128 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Tmem30bQ8BHG3 353 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Olfr877Q8VF62 311 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Card19Q9D1I2 183 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Tmem160Q9D938 188 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Cend1Q9JKC6 149 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Zfp53Q9Z117 652 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Trav4-4-dv10A0A075B651 110 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gm15293D3YX02 93 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Olfr177E9Q7W1 309 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Malsu1Q9CWV0 228 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Ubr5Q80TP3 2792 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Sertad4A7DTG3 377 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Rtl10D3YWW5 146 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Sap30O88574 220 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 RhogP84096 191 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Nkx3-1P97436 237 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Oosp2Q4FZG8 168 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Fam110aQ8R184 296 aa12.83□□□□□ -0.36
Trim28-201ENSMUST00000005705 Gm20379A0A087WR34 119 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Olfr1380Q7TQT5 311 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Slamf7Q8BHK6 333 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Trpt1Q8K3A2 249 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Trav6-6A0A075B603 114 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 IgipA0A1B0GR74 53 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Saa3P04918 122 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Reg1P43137 165 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Olfr761Q7TRJ0 323 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Q9CQ90 155 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Vstm5Q9D806 199 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Crybb3Q9JJU9 211 aa12.82□□□□□ -0.36
Trim28-201ENSMUST00000005705 Trbv14A0A140T8L9 115 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 SbpP15501 199 aa12.81□□□□□ -0.36
Trim28-201ENSMUST00000005705 Cacng7P62956 275 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 107.2 ms