RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 DIRC1Q969H9 104 aa8.11□□□□□ -1.11
PHGDH-218ENST00000641491 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
PHGDH-218ENST00000641491 BVES-AS1Q5T3Y7 98 aa8.1□□□□□ -1.11
PHGDH-218ENST00000641491 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
PHGDH-218ENST00000641491 LINC00337Q8N6G1 96 aa8.1□□□□□ -1.11
PHGDH-218ENST00000641491 PRO1854Q9UHT4 67 aa8.1□□□□□ -1.11
PHGDH-218ENST00000641491 DMBT1Q9UGM3 2413 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-218ENST00000641491 EPM2AB3EWF7 344 aa8.09□□□□□ -1.11
PHGDH-218ENST00000641491 ZNF73O43830 326 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-218ENST00000641491 SNCGO76070 127 aa8.09□□□□□ -1.11
PHGDH-218ENST00000641491 BCE1O60756 84 aa8.08□□□□□ -1.12
PHGDH-218ENST00000641491 CFC1BP0CG36 223 aa8.08□□□□□ -1.12
PHGDH-218ENST00000641491 CFC1P0CG37 223 aa8.08□□□□□ -1.12
PHGDH-218ENST00000641491 PSMB2P49721 201 aa8.08□□□□□ -1.12
PHGDH-218ENST00000641491 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
PHGDH-218ENST00000641491 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
PHGDH-218ENST00000641491 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
PHGDH-218ENST00000641491 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
PHGDH-218ENST00000641491 COX6CP09669 75 aa8.07□□□□□ -1.12
PHGDH-218ENST00000641491 RPL28P46779 137 aaKnown RBP8.07□□□□□ -1.12
PHGDH-218ENST00000641491 K7ERJ3 54 aa8.05□□□□□ -1.12
PHGDH-218ENST00000641491 SLC25A20O43772 301 aa8.05□□□□□ -1.12
PHGDH-218ENST00000641491 Q5VSD8 79 aa8.05□□□□□ -1.12
PHGDH-218ENST00000641491 COX7BP24311 80 aa8.04□□□□□ -1.12
PHGDH-218ENST00000641491 C6orf99Q4VX62 202 aa8.04□□□□□ -1.12
PHGDH-218ENST00000641491 A0A1B0GWB2 263 aa8.03□□□□□ -1.12
PHGDH-218ENST00000641491 SCGB1C2P0DMR2 95 aa8.03□□□□□ -1.12
PHGDH-218ENST00000641491 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
PHGDH-218ENST00000641491 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
PHGDH-218ENST00000641491 IGLV7-43P04211 117 aa8.02□□□□□ -1.13
PHGDH-218ENST00000641491 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
PHGDH-218ENST00000641491 DNAH8Q96JB1 4490 aa8.02□□□□□ -1.13
PHGDH-218ENST00000641491 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
PHGDH-218ENST00000641491 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
PHGDH-218ENST00000641491 PRLHP81277 87 aa8.01□□□□□ -1.13
PHGDH-218ENST00000641491 DHRS4-AS1Q9P1J3 65 aa8.01□□□□□ -1.13
PHGDH-218ENST00000641491 ZNF861PO60384 105 aa8□□□□□ -1.13
PHGDH-218ENST00000641491 COL5A1-AS1Q5SY13 56 aa8□□□□□ -1.13
PHGDH-218ENST00000641491 H0YGX0 51 aa7.99□□□□□ -1.13
PHGDH-218ENST00000641491 Q6ZRX8 168 aa7.99□□□□□ -1.13
PHGDH-218ENST00000641491 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
PHGDH-218ENST00000641491 B5MCH6 92 aa7.98□□□□□ -1.13
PHGDH-218ENST00000641491 TSPAN13O95857 204 aa7.98□□□□□ -1.13
PHGDH-218ENST00000641491 SPRR1AP35321 89 aa7.98□□□□□ -1.13
PHGDH-218ENST00000641491 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
PHGDH-218ENST00000641491 KRTAP11-1Q8IUC1 163 aa7.98□□□□□ -1.13
PHGDH-218ENST00000641491 H0Y9J4 135 aa7.97□□□□□ -1.13
PHGDH-218ENST00000641491 DNAL4O96015 105 aa7.97□□□□□ -1.13
PHGDH-218ENST00000641491 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
PHGDH-218ENST00000641491 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
PHGDH-218ENST00000641491 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
PHGDH-218ENST00000641491 TRIAP1O43715 76 aa7.95□□□□□ -1.14
PHGDH-218ENST00000641491 GHRHP01286 108 aa7.95□□□□□ -1.14
PHGDH-218ENST00000641491 SNHG12Q9BXW3 62 aa7.95□□□□□ -1.14
PHGDH-218ENST00000641491 hADV29S1A0JD25 119 aa7.94□□□□□ -1.14
PHGDH-218ENST00000641491 KRTAP4-16G5E9R7 235 aaPredicted RBP7.92□□□□□ -1.14
PHGDH-218ENST00000641491 H3BUT2 72 aa7.92□□□□□ -1.14
PHGDH-218ENST00000641491 FABP2P12104 132 aa7.92□□□□□ -1.14
PHGDH-218ENST00000641491 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
PHGDH-218ENST00000641491 A0A1B0GX51 115 aa7.91□□□□□ -1.14
PHGDH-218ENST00000641491 C9orf118A6NHY6 69 aa7.91□□□□□ -1.14
PHGDH-218ENST00000641491 NAA38Q9BRA0 125 aaKnown RBP7.91□□□□□ -1.14
PHGDH-218ENST00000641491 FLG2Q5D862 2391 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-218ENST00000641491 ATXN8Q156A1 80 aa7.9□□□□□ -1.14
PHGDH-218ENST00000641491 LINC00575Q6W349 94 aa7.9□□□□□ -1.14
PHGDH-218ENST00000641491 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
PHGDH-218ENST00000641491 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
PHGDH-218ENST00000641491 DEFB105AQ8NG35 78 aa7.89□□□□□ -1.15
PHGDH-218ENST00000641491 Q9BRP9 147 aa7.89□□□□□ -1.15
PHGDH-218ENST00000641491 TRBV20-1A0A075B6N2 111 aa7.88□□□□□ -1.15
PHGDH-218ENST00000641491 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
PHGDH-218ENST00000641491 OCIAD2Q56VL3 154 aa7.88□□□□□ -1.15
PHGDH-218ENST00000641491 GAGE2AQ6NT46 116 aa7.88□□□□□ -1.15
PHGDH-218ENST00000641491 CLEC2BQ92478 149 aa7.88□□□□□ -1.15
PHGDH-218ENST00000641491 H3BQ85 93 aa7.87□□□□□ -1.15
PHGDH-218ENST00000641491 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.87□□□□□ -1.15
PHGDH-218ENST00000641491 MYCBP2O75592 4640 aa7.87□□□□□ -1.15
PHGDH-218ENST00000641491 A0A1W2PPM0 123 aa7.86□□□□□ -1.15
PHGDH-218ENST00000641491 F8WEM9 126 aa7.86□□□□□ -1.15
PHGDH-218ENST00000641491 Q6ZQY7 126 aa7.86□□□□□ -1.15
PHGDH-218ENST00000641491 TEX49A0A1B0GTD5 131 aa7.85□□□□□ -1.15
PHGDH-218ENST00000641491 ORMDL1Q9P0S3 153 aa7.85□□□□□ -1.15
PHGDH-218ENST00000641491 LAMTOR3Q9UHA4 124 aa7.85□□□□□ -1.15
PHGDH-218ENST00000641491 LST1O00453 97 aa7.84□□□□□ -1.15
PHGDH-218ENST00000641491 TRACP01848 142 aa7.84□□□□□ -1.15
PHGDH-218ENST00000641491 SPRR4Q96PI1 79 aa7.84□□□□□ -1.15
PHGDH-218ENST00000641491 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
PHGDH-218ENST00000641491 PPDPFLQ8WWR9 84 aa7.83□□□□□ -1.16
PHGDH-218ENST00000641491 SPCS1Q9Y6A9 102 aa7.83□□□□□ -1.16
PHGDH-218ENST00000641491 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
PHGDH-218ENST00000641491 CRYGAP11844 174 aa7.82□□□□□ -1.16
PHGDH-218ENST00000641491 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-218ENST00000641491 C9orf153Q5TBE3 101 aa7.82□□□□□ -1.16
PHGDH-218ENST00000641491 GTF2H5Q6ZYL4 71 aa7.82□□□□□ -1.16
PHGDH-218ENST00000641491 ST20-AS1Q8NBB2 130 aa7.82□□□□□ -1.16
PHGDH-218ENST00000641491 FAM218AQ96MZ4 157 aa7.82□□□□□ -1.16
PHGDH-218ENST00000641491 TCL1BO95988 128 aa7.81□□□□□ -1.16
PHGDH-218ENST00000641491 FAM229BQ4G0N7 80 aa7.81□□□□□ -1.16
PHGDH-218ENST00000641491 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
PHGDH-218ENST00000641491 FAT1Q14517 4588 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms