RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TRAV23DV6A0A075B6W5 121 aa7.98□□□□□ -1.13
GTF3A-209ENST00000640289 A4D1N5 150 aa7.98□□□□□ -1.13
GTF3A-209ENST00000640289 KRTAP4-16G5E9R7 235 aaPredicted RBP7.98□□□□□ -1.13
GTF3A-209ENST00000640289 MYCBP2O75592 4640 aa7.97□□□□□ -1.13
GTF3A-209ENST00000640289 FLG2Q5D862 2391 aaPredicted RBP7.97□□□□□ -1.13
GTF3A-209ENST00000640289 FAT3Q8TDW7 4589 aa7.97□□□□□ -1.13
GTF3A-209ENST00000640289 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
GTF3A-209ENST00000640289 A6NDN8 102 aa7.96□□□□□ -1.14
GTF3A-209ENST00000640289 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.14
GTF3A-209ENST00000640289 SMIM6P0DI80 62 aa7.96□□□□□ -1.14
GTF3A-209ENST00000640289 C12orf57Q99622 126 aa7.96□□□□□ -1.14
GTF3A-209ENST00000640289 LRP1Q07954 4544 aaKnown RBP7.96□□□□□ -1.14
GTF3A-209ENST00000640289 ZNF73O43830 326 aaPredicted RBP7.95□□□□□ -1.14
GTF3A-209ENST00000640289 B5MCH6 92 aa7.94□□□□□ -1.14
GTF3A-209ENST00000640289 OXTP01178 125 aa7.94□□□□□ -1.14
GTF3A-209ENST00000640289 HIGD2AQ9BW72 106 aa7.94□□□□□ -1.14
GTF3A-209ENST00000640289 PRO1933Q9H354 126 aa7.94□□□□□ -1.14
GTF3A-209ENST00000640289 UQCR10Q9UDW1 63 aa7.94□□□□□ -1.14
GTF3A-209ENST00000640289 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
GTF3A-209ENST00000640289 KRTAP1-4P0C5Y4 121 aa7.93□□□□□ -1.14
GTF3A-209ENST00000640289 TAL2Q16559 108 aa7.92□□□□□ -1.14
GTF3A-209ENST00000640289 CEND1Q8N111 149 aa7.92□□□□□ -1.14
GTF3A-209ENST00000640289 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
GTF3A-209ENST00000640289 LINC01600Q96MT4 127 aa7.92□□□□□ -1.14
GTF3A-209ENST00000640289 CBY1Q9Y3M2 126 aa7.92□□□□□ -1.14
GTF3A-209ENST00000640289 J3QL48 77 aa7.91□□□□□ -1.14
GTF3A-209ENST00000640289 C6orf99Q4VX62 202 aa7.91□□□□□ -1.14
GTF3A-209ENST00000640289 Q6ZRX8 168 aa7.91□□□□□ -1.14
GTF3A-209ENST00000640289 Q9BRP9 147 aa7.91□□□□□ -1.14
GTF3A-209ENST00000640289 MT1HL1P0DM35 61 aa7.9□□□□□ -1.14
GTF3A-209ENST00000640289 ERC2-IT1O76042 136 aa7.89□□□□□ -1.15
GTF3A-209ENST00000640289 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
GTF3A-209ENST00000640289 CFC1P0CG37 223 aa7.89□□□□□ -1.15
GTF3A-209ENST00000640289 RPL13AP40429 203 aaKnown RBP7.89□□□□□ -1.15
GTF3A-209ENST00000640289 FXYD2P54710 66 aa7.89□□□□□ -1.15
GTF3A-209ENST00000640289 HSD52Q0P140 79 aa7.89□□□□□ -1.15
GTF3A-209ENST00000640289 PRR26Q8N8Z3 221 aa7.89□□□□□ -1.15
GTF3A-209ENST00000640289 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
GTF3A-209ENST00000640289 ANAPC11Q9NYG5 84 aa7.89□□□□□ -1.15
GTF3A-209ENST00000640289 HINT1P49773 126 aaPredicted RBP7.88□□□□□ -1.15
GTF3A-209ENST00000640289 COX7BP24311 80 aa7.87□□□□□ -1.15
GTF3A-209ENST00000640289 ELOF1P60002 83 aaKnown RBP7.87□□□□□ -1.15
GTF3A-209ENST00000640289 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
GTF3A-209ENST00000640289 RAB37Q96AX2 223 aa7.86□□□□□ -1.15
GTF3A-209ENST00000640289 SPRR4Q96PI1 79 aa7.86□□□□□ -1.15
GTF3A-209ENST00000640289 A0A087X002 238 aa7.85□□□□□ -1.15
GTF3A-209ENST00000640289 A0A0B4J2C4 111 aa7.85□□□□□ -1.15
GTF3A-209ENST00000640289 TMEM238LA0A1B0GVL6 79 aa7.85□□□□□ -1.15
GTF3A-209ENST00000640289 A6NJY4 79 aa7.85□□□□□ -1.15
GTF3A-209ENST00000640289 H7C2G1 150 aa7.85□□□□□ -1.15
GTF3A-209ENST00000640289 TNXBP22105 4242 aa7.84□□□□□ -1.15
GTF3A-209ENST00000640289 TRBV7-6A0A0J9YX20 115 aa7.84□□□□□ -1.15
GTF3A-209ENST00000640289 A0A1B0GWB2 263 aa7.83□□□□□ -1.16
GTF3A-209ENST00000640289 NHP2Q9NX24 153 aaKnown RBP7.83□□□□□ -1.16
GTF3A-209ENST00000640289 CTAG1AP78358 180 aa7.82□□□□□ -1.16
GTF3A-209ENST00000640289 GAGE2AQ6NT46 116 aa7.82□□□□□ -1.16
GTF3A-209ENST00000640289 ST20-AS1Q8NBB2 130 aa7.82□□□□□ -1.16
GTF3A-209ENST00000640289 DHRS4-AS1Q9P1J3 65 aa7.82□□□□□ -1.16
GTF3A-209ENST00000640289 ZNF706Q9Y5V0 76 aaPredicted RBP7.82□□□□□ -1.16
GTF3A-209ENST00000640289 K7ERJ3 54 aa7.81□□□□□ -1.16
GTF3A-209ENST00000640289 CRYGAP11844 174 aa7.81□□□□□ -1.16
GTF3A-209ENST00000640289 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
GTF3A-209ENST00000640289 BVES-AS1Q5T3Y7 98 aa7.81□□□□□ -1.16
GTF3A-209ENST00000640289 PRO1854Q9UHT4 67 aa7.81□□□□□ -1.16
GTF3A-209ENST00000640289 TSTD3H0UI37 97 aa7.8□□□□□ -1.16
GTF3A-209ENST00000640289 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
GTF3A-209ENST00000640289 VAMP3Q15836 100 aa7.79□□□□□ -1.16
GTF3A-209ENST00000640289 Q1RN00 199 aa7.79□□□□□ -1.16
GTF3A-209ENST00000640289 LINC00483Q53H64 154 aa7.78□□□□□ -1.16
GTF3A-209ENST00000640289 C3orf22Q8N5N4 141 aa7.78□□□□□ -1.16
GTF3A-209ENST00000640289 LINC00575Q6W349 94 aa7.77□□□□□ -1.17
GTF3A-209ENST00000640289 TYMSOSQ8TAI1 123 aa7.77□□□□□ -1.17
GTF3A-209ENST00000640289 DEFB105AQ8NG35 78 aa7.75□□□□□ -1.17
GTF3A-209ENST00000640289 HERC1Q15751 4861 aa7.74□□□□□ -1.17
GTF3A-209ENST00000640289 M0R143 59 aa7.74□□□□□ -1.17
GTF3A-209ENST00000640289 SLC25A20O43772 301 aa7.74□□□□□ -1.17
GTF3A-209ENST00000640289 IGLV9-49A0A0B4J1Y8 123 aa7.73□□□□□ -1.17
GTF3A-209ENST00000640289 hADV29S1A0JD25 119 aa7.73□□□□□ -1.17
GTF3A-209ENST00000640289 TRIAP1O43715 76 aa7.73□□□□□ -1.17
GTF3A-209ENST00000640289 TSPAN13O95857 204 aa7.73□□□□□ -1.17
GTF3A-209ENST00000640289 SPRR1BP22528 89 aa7.73□□□□□ -1.17
GTF3A-209ENST00000640289 LINC01547P58512 204 aaPredicted RBP7.73□□□□□ -1.17
GTF3A-209ENST00000640289 FAM218AQ96MZ4 157 aa7.73□□□□□ -1.17
GTF3A-209ENST00000640289 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
GTF3A-209ENST00000640289 H0YGX0 51 aa7.71□□□□□ -1.18
GTF3A-209ENST00000640289 Q6ZQY7 126 aa7.71□□□□□ -1.18
GTF3A-209ENST00000640289 IGLV5-48A0A075B6I7 105 aa7.7□□□□□ -1.18
GTF3A-209ENST00000640289 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
GTF3A-209ENST00000640289 PSMB2P49721 201 aa7.7□□□□□ -1.18
GTF3A-209ENST00000640289 MOBPQ13875 183 aa7.7□□□□□ -1.18
GTF3A-209ENST00000640289 BATFQ16520 125 aa7.69□□□□□ -1.18
GTF3A-209ENST00000640289 CLEC2BQ92478 149 aa7.69□□□□□ -1.18
GTF3A-209ENST00000640289 C9orf153Q5TBE3 101 aa7.68□□□□□ -1.18
GTF3A-209ENST00000640289 SMIM29Q86T20 159 aa7.68□□□□□ -1.18
GTF3A-209ENST00000640289 Q8N377 158 aa7.68□□□□□ -1.18
GTF3A-209ENST00000640289 LINC00304Q8N9R0 145 aa7.68□□□□□ -1.18
GTF3A-209ENST00000640289 Q8NBF4 154 aa7.68□□□□□ -1.18
GTF3A-209ENST00000640289 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.67□□□□□ -1.18
GTF3A-209ENST00000640289 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
GTF3A-209ENST00000640289 NAA38Q9BRA0 125 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms