RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 AVPP01185 164 aa8.88□□□□□ -0.99
UBE3A-228ENST00000638155 C9orf92A6NGG3 77 aa8.88□□□□□ -0.99
UBE3A-228ENST00000638155 LINC00304Q8N9R0 145 aa8.88□□□□□ -0.99
UBE3A-228ENST00000638155 FASNP49327 2511 aaKnown RBP8.88□□□□□ -0.99
UBE3A-228ENST00000638155 USP9YO00507 2555 aaPredicted RBP8.88□□□□□ -0.99
UBE3A-228ENST00000638155 LINC00315P59091 139 aa8.88□□□□□ -0.99
UBE3A-228ENST00000638155 SPANXA2-OT1Q8N9U9 137 aa8.87□□□□□ -0.99
UBE3A-228ENST00000638155 ZNF575Q86XF7 245 aa8.86□□□□□ -0.99
UBE3A-228ENST00000638155 H7BZZ5 65 aa8.85□□□□□ -0.99
UBE3A-228ENST00000638155 FAM168BA1KXE4 195 aa8.84□□□□□ -0.99
UBE3A-228ENST00000638155 NBDYA0A0U1RRE5 68 aa8.84□□□□□ -0.99
UBE3A-228ENST00000638155 BPTFQ12830 3046 aa8.83□□□□□ -1
UBE3A-228ENST00000638155 IGFL1Q6UW32 110 aa8.82□□□□□ -1
UBE3A-228ENST00000638155 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
UBE3A-228ENST00000638155 WIPF1O43516 503 aa8.82□□□□□ -1
UBE3A-228ENST00000638155 KRTAP10-9P60411 292 aa8.81□□□□□ -1
UBE3A-228ENST00000638155 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
UBE3A-228ENST00000638155 Q8N1X5 172 aa8.77□□□□□ -1.01
UBE3A-228ENST00000638155 DMAC1Q96GE9 116 aa8.77□□□□□ -1.01
UBE3A-228ENST00000638155 LINC00588Q9Y4M8 146 aa8.77□□□□□ -1.01
UBE3A-228ENST00000638155 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1.01
UBE3A-228ENST00000638155 M0R2T5 61 aa8.75□□□□□ -1.01
UBE3A-228ENST00000638155 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
UBE3A-228ENST00000638155 DNAH10OSP0CZ25 163 aa8.73□□□□□ -1.01
UBE3A-228ENST00000638155 EPG5Q9HCE0 2579 aa8.72□□□□□ -1.01
UBE3A-228ENST00000638155 A0A1B0GU33 70 aa8.71□□□□□ -1.02
UBE3A-228ENST00000638155 ZNF861PO60384 105 aa8.7□□□□□ -1.02
UBE3A-228ENST00000638155 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
UBE3A-228ENST00000638155 CDSNQ15517 529 aa8.69□□□□□ -1.02
UBE3A-228ENST00000638155 LITAFQ99732 161 aa8.69□□□□□ -1.02
UBE3A-228ENST00000638155 Q75L30 129 aa8.69□□□□□ -1.02
UBE3A-228ENST00000638155 C15orf56Q8N910 161 aa8.68□□□□□ -1.02
UBE3A-228ENST00000638155 SPINK7P58062 85 aa8.64□□□□□ -1.03
UBE3A-228ENST00000638155 Q8N377 158 aa8.64□□□□□ -1.03
UBE3A-228ENST00000638155 HRES1P13985 223 aa8.64□□□□□ -1.03
UBE3A-228ENST00000638155 TLX1NBP0CAT3 122 aa8.63□□□□□ -1.03
UBE3A-228ENST00000638155 PRRC2CQ9Y520 2896 aaKnown RBP8.63□□□□□ -1.03
UBE3A-228ENST00000638155 Q8NAQ8 132 aa8.63□□□□□ -1.03
UBE3A-228ENST00000638155 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
UBE3A-228ENST00000638155 SRCAPQ6ZRS2 3230 aa8.59□□□□□ -1.03
UBE3A-228ENST00000638155 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
UBE3A-228ENST00000638155 KRTAP24-1Q3LI83 254 aa8.58□□□□□ -1.04
UBE3A-228ENST00000638155 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
UBE3A-228ENST00000638155 Q6ZSA8 131 aa8.56□□□□□ -1.04
UBE3A-228ENST00000638155 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
UBE3A-228ENST00000638155 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
UBE3A-228ENST00000638155 SMR3BP02814 79 aaPredicted RBP8.55□□□□□ -1.04
UBE3A-228ENST00000638155 PRAC1Q96KF2 57 aa8.53□□□□□ -1.04
UBE3A-228ENST00000638155 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
UBE3A-228ENST00000638155 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.05
UBE3A-228ENST00000638155 COL4A2P08572 1712 aa8.52□□□□□ -1.05
UBE3A-228ENST00000638155 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
UBE3A-228ENST00000638155 S4R3F8 94 aa8.51□□□□□ -1.05
UBE3A-228ENST00000638155 CEP295Q9C0D2 2601 aa8.5□□□□□ -1.05
UBE3A-228ENST00000638155 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
UBE3A-228ENST00000638155 HECTD1Q9ULT8 2610 aa8.5□□□□□ -1.05
UBE3A-228ENST00000638155 OCR1Q9BZK8 76 aa8.48□□□□□ -1.05
UBE3A-228ENST00000638155 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
UBE3A-228ENST00000638155 A0A1W2PPR1 153 aa8.47□□□□□ -1.05
UBE3A-228ENST00000638155 CFAP46Q8IYW2 2715 aa8.47□□□□□ -1.05
UBE3A-228ENST00000638155 LINC01558Q9Y6Z2 57 aa8.46□□□□□ -1.05
UBE3A-228ENST00000638155 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
UBE3A-228ENST00000638155 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
UBE3A-228ENST00000638155 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
UBE3A-228ENST00000638155 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
UBE3A-228ENST00000638155 A0A087WTM6 91 aa8.43□□□□□ -1.06
UBE3A-228ENST00000638155 ROMO1P60602 79 aa8.43□□□□□ -1.06
UBE3A-228ENST00000638155 MGAM2Q2M2H8 2515 aa8.42□□□□□ -1.06
UBE3A-228ENST00000638155 Q8N9P0 234 aaPredicted RBP8.42□□□□□ -1.06
UBE3A-228ENST00000638155 NBEAL1Q6ZS30 2694 aa8.41□□□□□ -1.06
UBE3A-228ENST00000638155 R4GN34 69 aa8.41□□□□□ -1.06
UBE3A-228ENST00000638155 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
UBE3A-228ENST00000638155 AKAP13Q12802 2813 aa8.41□□□□□ -1.06
UBE3A-228ENST00000638155 MAST4O15021 2626 aa8.4□□□□□ -1.06
UBE3A-228ENST00000638155 ATRQ13535 2644 aa8.4□□□□□ -1.06
UBE3A-228ENST00000638155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.39□□□□□ -1.07
UBE3A-228ENST00000638155 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
UBE3A-228ENST00000638155 EIF4EBP3O60516 100 aaPredicted RBP8.39□□□□□ -1.07
UBE3A-228ENST00000638155 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
UBE3A-228ENST00000638155 STAB1Q9NY15 2570 aa8.36□□□□□ -1.07
UBE3A-228ENST00000638155 K7EIL1 84 aa8.36□□□□□ -1.07
UBE3A-228ENST00000638155 C19orf73Q9NVV2 129 aa8.35□□□□□ -1.07
UBE3A-228ENST00000638155 CNBPP62633 177 aaKnown RBP8.35□□□□□ -1.07
UBE3A-228ENST00000638155 Q5VV11 94 aa8.35□□□□□ -1.07
UBE3A-228ENST00000638155 Q5XG85 94 aa8.33□□□□□ -1.08
UBE3A-228ENST00000638155 CENPEQ02224 2701 aa8.31□□□□□ -1.08
UBE3A-228ENST00000638155 ZCCHC13Q8WW36 166 aaKnown RBP8.31□□□□□ -1.08
UBE3A-228ENST00000638155 RPL37P61927 97 aaKnown RBP8.3□□□□□ -1.08
UBE3A-228ENST00000638155 LINC00612Q8N6U2 182 aa8.3□□□□□ -1.08
UBE3A-228ENST00000638155 TNP2Q05952 138 aa8.29□□□□□ -1.08
UBE3A-228ENST00000638155 CENPFP49454 3210 aa8.29□□□□□ -1.08
UBE3A-228ENST00000638155 KRTAP10-11P60412 298 aa8.28□□□□□ -1.08
UBE3A-228ENST00000638155 GIG44P09565 113 aaPredicted RBP8.27□□□□□ -1.09
UBE3A-228ENST00000638155 FLNBO75369 2602 aaKnown RBP8.26□□□□□ -1.09
UBE3A-228ENST00000638155 C10orf142B7Z368 130 aa8.25□□□□□ -1.09
UBE3A-228ENST00000638155 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
UBE3A-228ENST00000638155 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
UBE3A-228ENST00000638155 STAB2Q8WWQ8 2551 aa8.23□□□□□ -1.09
UBE3A-228ENST00000638155 SEC61BP60468 96 aaKnown RBP8.21□□□□□ -1.09
UBE3A-228ENST00000638155 M0QZ58 72 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms