RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 Q8N1X5 172 aa11.05□□□□□ -0.64
CACNA1A-258ENST00000638029 Q6ZRX8 168 aa11.05□□□□□ -0.64
CACNA1A-258ENST00000638029 CYP4F30PQ9H0H9 118 aa11.05□□□□□ -0.64
CACNA1A-258ENST00000638029 LINC00336Q6ZUF6 198 aa11.05□□□□□ -0.64
CACNA1A-258ENST00000638029 H3BPC8 53 aa11.04□□□□□ -0.64
CACNA1A-258ENST00000638029 LCA10Q71F78 164 aa11.04□□□□□ -0.64
CACNA1A-258ENST00000638029 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
CACNA1A-258ENST00000638029 IGHV3OR16-9A0A0B4J2B5 98 aa11.04□□□□□ -0.64
CACNA1A-258ENST00000638029 USP9YO00507 2555 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-258ENST00000638029 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-258ENST00000638029 MRPL34Q9BQ48 92 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-258ENST00000638029 CEP350Q5VT06 3117 aa11.02□□□□□ -0.65
CACNA1A-258ENST00000638029 IGLV1-50A0A075B6I6 118 aa11.02□□□□□ -0.65
CACNA1A-258ENST00000638029 CAMK2N1Q7Z7J9 78 aa11.02□□□□□ -0.65
CACNA1A-258ENST00000638029 CDC42SE1Q9NRR8 79 aa11□□□□□ -0.65
CACNA1A-258ENST00000638029 H3BNG1 76 aa10.99□□□□□ -0.65
CACNA1A-258ENST00000638029 PCNTO95613 3336 aa10.99□□□□□ -0.65
CACNA1A-258ENST00000638029 A8MWP4 228 aa10.98□□□□□ -0.65
CACNA1A-258ENST00000638029 LOC101927531A0A1B0GV80 90 aa10.98□□□□□ -0.65
CACNA1A-258ENST00000638029 PLA2G2DQ9UNK4 145 aa10.96□□□□□ -0.65
CACNA1A-258ENST00000638029 LOC110117498A0A087WWA1 95 aa10.96□□□□□ -0.65
CACNA1A-258ENST00000638029 H3BS24 57 aa10.95□□□□□ -0.66
CACNA1A-258ENST00000638029 Q6ZSA8 131 aa10.95□□□□□ -0.66
CACNA1A-258ENST00000638029 A0A1B0GW54 56 aa10.95□□□□□ -0.66
CACNA1A-258ENST00000638029 C5orf42Q9H799 3197 aa10.94□□□□□ -0.66
CACNA1A-258ENST00000638029 LINC01546A6NGU7 62 aa10.93□□□□□ -0.66
CACNA1A-258ENST00000638029 PRO0461Q9UI25 63 aa10.93□□□□□ -0.66
CACNA1A-258ENST00000638029 CHD8Q9HCK8 2581 aa10.93□□□□□ -0.66
CACNA1A-258ENST00000638029 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
CACNA1A-258ENST00000638029 FASNP49327 2511 aaKnown RBP10.89□□□□□ -0.67
CACNA1A-258ENST00000638029 C15orf56Q8N910 161 aa10.88□□□□□ -0.67
CACNA1A-258ENST00000638029 LINC00528Q8N1L1 170 aa10.87□□□□□ -0.67
CACNA1A-258ENST00000638029 GVQW2A0A096LPI5 108 aaPredicted RBP10.87□□□□□ -0.67
CACNA1A-258ENST00000638029 Q8NAQ8 132 aa10.87□□□□□ -0.67
CACNA1A-258ENST00000638029 TLX1NBP0CAT3 122 aa10.86□□□□□ -0.67
CACNA1A-258ENST00000638029 KRTAP10-11P60412 298 aa10.85□□□□□ -0.67
CACNA1A-258ENST00000638029 XIRP2A4UGR9 3374 aa10.85□□□□□ -0.67
CACNA1A-258ENST00000638029 C8orf17Q9NRJ1 99 aa10.85□□□□□ -0.67
CACNA1A-258ENST00000638029 K7EIL1 84 aa10.83□□□□□ -0.68
CACNA1A-258ENST00000638029 ZNF861PO60384 105 aa10.83□□□□□ -0.68
CACNA1A-258ENST00000638029 IGFL1Q6UW32 110 aa10.82□□□□□ -0.68
CACNA1A-258ENST00000638029 PRR15Q8IV56 129 aa10.81□□□□□ -0.68
CACNA1A-258ENST00000638029 C10orf142B7Z368 130 aa10.78□□□□□ -0.68
CACNA1A-258ENST00000638029 A0A1B0GVX0 72 aa10.78□□□□□ -0.68
CACNA1A-258ENST00000638029 A0A087WTM6 91 aa10.77□□□□□ -0.69
CACNA1A-258ENST00000638029 FAM104AQ969W3 186 aa10.74□□□□□ -0.69
CACNA1A-258ENST00000638029 IGLV7-46A0A075B6I9 117 aa10.73□□□□□ -0.69
CACNA1A-258ENST00000638029 H7BZZ5 65 aa10.72□□□□□ -0.69
CACNA1A-258ENST00000638029 Q5VSD8 79 aa10.72□□□□□ -0.69
CACNA1A-258ENST00000638029 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.7
CACNA1A-258ENST00000638029 IGLV7-43P04211 117 aa10.71□□□□□ -0.7
CACNA1A-258ENST00000638029 PRR26Q8N8Z3 221 aa10.7□□□□□ -0.7
CACNA1A-258ENST00000638029 CEP295Q9C0D2 2601 aa10.7□□□□□ -0.7
CACNA1A-258ENST00000638029 KLKP1Q107X0 134 aa10.68□□□□□ -0.7
CACNA1A-258ENST00000638029 EPG5Q9HCE0 2579 aa10.66□□□□□ -0.7
CACNA1A-258ENST00000638029 Q1T7F1 81 aa10.66□□□□□ -0.7
CACNA1A-258ENST00000638029 KCNQ1DNQ9H478 68 aa10.62□□□□□ -0.71
CACNA1A-258ENST00000638029 REV3LO60673 3130 aa10.61□□□□□ -0.71
CACNA1A-258ENST00000638029 Q8N377 158 aa10.6□□□□□ -0.71
CACNA1A-258ENST00000638029 A0A0A0MQY5 61 aa10.59□□□□□ -0.71
CACNA1A-258ENST00000638029 HRES1P13985 223 aa10.56□□□□□ -0.72
CACNA1A-258ENST00000638029 S4R3F8 94 aa10.55□□□□□ -0.72
CACNA1A-258ENST00000638029 CFAP46Q8IYW2 2715 aa10.55□□□□□ -0.72
CACNA1A-258ENST00000638029 PRAC1Q96KF2 57 aa10.55□□□□□ -0.72
CACNA1A-258ENST00000638029 C9orf163Q8N9P6 203 aa10.54□□□□□ -0.72
CACNA1A-258ENST00000638029 TNP2Q05952 138 aa10.54□□□□□ -0.72
CACNA1A-258ENST00000638029 LITAFQ99732 161 aa10.53□□□□□ -0.72
CACNA1A-258ENST00000638029 LINC00612Q8N6U2 182 aa10.53□□□□□ -0.72
CACNA1A-258ENST00000638029 CSAG1Q6PB30 78 aa10.52□□□□□ -0.72
CACNA1A-258ENST00000638029 CASC10Q5T4H9 136 aa10.51□□□□□ -0.73
CACNA1A-258ENST00000638029 PLAC4Q8WY50 150 aa10.51□□□□□ -0.73
CACNA1A-258ENST00000638029 CFAP54Q96N23 3096 aa10.51□□□□□ -0.73
CACNA1A-258ENST00000638029 SPINK7P58062 85 aa10.5□□□□□ -0.73
CACNA1A-258ENST00000638029 H1FX-AS1Q4G0G2 97 aa10.5□□□□□ -0.73
CACNA1A-258ENST00000638029 A0A1B0GU33 70 aa10.5□□□□□ -0.73
CACNA1A-258ENST00000638029 FAM229BQ4G0N7 80 aa10.48□□□□□ -0.73
CACNA1A-258ENST00000638029 HECTD1Q9ULT8 2610 aa10.48□□□□□ -0.73
CACNA1A-258ENST00000638029 SPANXA2-OT1Q8N9U9 137 aa10.47□□□□□ -0.73
CACNA1A-258ENST00000638029 AKAP13Q12802 2813 aa10.46□□□□□ -0.73
CACNA1A-258ENST00000638029 KRTAP10-3P60369 221 aa10.46□□□□□ -0.73
CACNA1A-258ENST00000638029 CELSR3Q9NYQ7 3312 aa10.46□□□□□ -0.73
CACNA1A-258ENST00000638029 EIF4EBP3O60516 100 aaPredicted RBP10.46□□□□□ -0.74
CACNA1A-258ENST00000638029 MGAM2Q2M2H8 2515 aa10.45□□□□□ -0.74
CACNA1A-258ENST00000638029 R4GN34 69 aa10.45□□□□□ -0.74
CACNA1A-258ENST00000638029 PRR34Q9NV39 138 aa10.45□□□□□ -0.74
CACNA1A-258ENST00000638029 C19orf73Q9NVV2 129 aa10.45□□□□□ -0.74
CACNA1A-258ENST00000638029 LAMA2P24043 3122 aaKnown RBP10.45□□□□□ -0.74
CACNA1A-258ENST00000638029 SPRR4Q96PI1 79 aa10.44□□□□□ -0.74
CACNA1A-258ENST00000638029 FREM2Q5SZK8 3169 aa10.36□□□□□ -0.75
CACNA1A-258ENST00000638029 Q75L30 129 aa10.35□□□□□ -0.75
CACNA1A-258ENST00000638029 STAB1Q9NY15 2570 aa10.33□□□□□ -0.76
CACNA1A-258ENST00000638029 GIG44P09565 113 aaPredicted RBP10.31□□□□□ -0.76
CACNA1A-258ENST00000638029 KLK9Q2XQG4 91 aa10.31□□□□□ -0.76
CACNA1A-258ENST00000638029 A0A0C4DFX4 3053 aa10.31□□□□□ -0.76
CACNA1A-258ENST00000638029 ATRQ13535 2644 aa10.3□□□□□ -0.76
CACNA1A-258ENST00000638029 CNBPP62633 177 aaKnown RBP10.29□□□□□ -0.76
CACNA1A-258ENST00000638029 DMAC1Q96GE9 116 aa10.29□□□□□ -0.76
CACNA1A-258ENST00000638029 ITPR3Q14573 2671 aa10.28□□□□□ -0.76
CACNA1A-258ENST00000638029 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-258ENST00000638029 MKI67P46013 3256 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms