RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	TLX1NB	P0CAT3	122 aa		10.98	□□□□□ -0.65
CACNA1A-238	ENST00000637276	LINC00336	Q6ZUF6	198 aa		10.97	□□□□□ -0.65
CACNA1A-238	ENST00000637276	PCSK5	Q92824	1860 aa		10.97	□□□□□ -0.65
CACNA1A-238	ENST00000637276	LINC01561	Q8N1V8	128 aa		10.96	□□□□□ -0.66
CACNA1A-238	ENST00000637276		A8MWP4	228 aa		10.94	□□□□□ -0.66
CACNA1A-238	ENST00000637276	CDC42SE1	Q9NRR8	79 aa		10.93	□□□□□ -0.66
CACNA1A-238	ENST00000637276	KRTAP10-11	P60412	298 aa		10.91	□□□□□ -0.66
CACNA1A-238	ENST00000637276		Q6ZSA8	131 aa		10.9	□□□□□ -0.66
CACNA1A-238	ENST00000637276	LINC00483	Q53H64	154 aa		10.89	□□□□□ -0.67
CACNA1A-238	ENST00000637276	CEP295	Q9C0D2	2601 aa		10.88	□□□□□ -0.67
CACNA1A-238	ENST00000637276	COX8C	Q7Z4L0	72 aa		10.87	□□□□□ -0.67
CACNA1A-238	ENST00000637276	LOC101927531	A0A1B0GV80	90 aa		10.87	□□□□□ -0.67
CACNA1A-238	ENST00000637276	IGFL1	Q6UW32	110 aa		10.87	□□□□□ -0.67
CACNA1A-238	ENST00000637276	CEP350	Q5VT06	3117 aa		10.85	□□□□□ -0.67
CACNA1A-238	ENST00000637276	LINC00528	Q8N1L1	170 aa		10.85	□□□□□ -0.67
CACNA1A-238	ENST00000637276	C8orf17	Q9NRJ1	99 aa		10.85	□□□□□ -0.67
CACNA1A-238	ENST00000637276	UTRN	P46939	3433 aa		10.84	□□□□□ -0.67
CACNA1A-238	ENST00000637276		Q8NAQ8	132 aa		10.82	□□□□□ -0.68
CACNA1A-238	ENST00000637276	PRR26	Q8N8Z3	221 aa		10.81	□□□□□ -0.68
CACNA1A-238	ENST00000637276	LOC110117498	A0A087WWA1	95 aa		10.8	□□□□□ -0.68
CACNA1A-238	ENST00000637276	PRRC2C	Q9Y520	2896 aa	Known RBP	10.8	□□□□□ -0.68
CACNA1A-238	ENST00000637276	LINC01546	A6NGU7	62 aa		10.8	□□□□□ -0.68
CACNA1A-238	ENST00000637276	PRR15	Q8IV56	129 aa		10.79	□□□□□ -0.68
CACNA1A-238	ENST00000637276	CR1	P17927	2039 aa		10.79	□□□□□ -0.68
CACNA1A-238	ENST00000637276		K7EIL1	84 aa		10.78	□□□□□ -0.68
CACNA1A-238	ENST00000637276	PSORS1C2	Q9UIG4	136 aa		10.78	□□□□□ -0.68
CACNA1A-238	ENST00000637276		Q5VSD8	79 aa		10.78	□□□□□ -0.68
CACNA1A-238	ENST00000637276	PRO0461	Q9UI25	63 aa		10.77	□□□□□ -0.68
CACNA1A-238	ENST00000637276		A0A1B0GVX0	72 aa		10.76	□□□□□ -0.69
CACNA1A-238	ENST00000637276	CASC10	Q5T4H9	136 aa		10.75	□□□□□ -0.69
CACNA1A-238	ENST00000637276	DNAH12	Q6ZR08	3092 aa		10.75	□□□□□ -0.69
CACNA1A-238	ENST00000637276	ERC2-IT1	O76042	136 aa		10.75	□□□□□ -0.69
CACNA1A-238	ENST00000637276	ZNF861P	O60384	105 aa		10.74	□□□□□ -0.69
CACNA1A-238	ENST00000637276	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.73	□□□□□ -0.69
CACNA1A-238	ENST00000637276		A0A087WTM6	91 aa		10.72	□□□□□ -0.69
CACNA1A-238	ENST00000637276	FAM104A	Q969W3	186 aa		10.72	□□□□□ -0.69
CACNA1A-238	ENST00000637276	CD164	Q04900	197 aa		10.71	□□□□□ -0.7
CACNA1A-238	ENST00000637276		H3BPC8	53 aa		10.7	□□□□□ -0.7
CACNA1A-238	ENST00000637276	COL4A2	P08572	1712 aa		10.7	□□□□□ -0.7
CACNA1A-238	ENST00000637276	RPS28	P62857	69 aa	Known RBP	10.7	□□□□□ -0.7
CACNA1A-238	ENST00000637276	IGLV7-46	A0A075B6I9	117 aa		10.69	□□□□□ -0.7
CACNA1A-238	ENST00000637276	FLG2	Q5D862	2391 aa	Predicted RBP	10.69	□□□□□ -0.7
CACNA1A-238	ENST00000637276	IGLV7-43	P04211	117 aa		10.67	□□□□□ -0.7
CACNA1A-238	ENST00000637276	MGAM2	Q2M2H8	2515 aa		10.67	□□□□□ -0.7
CACNA1A-238	ENST00000637276	PLAC4	Q8WY50	150 aa		10.67	□□□□□ -0.7
CACNA1A-238	ENST00000637276	EIF4EBP3	O60516	100 aa	Predicted RBP	10.66	□□□□□ -0.7
CACNA1A-238	ENST00000637276	EPG5	Q9HCE0	2579 aa		10.65	□□□□□ -0.7
CACNA1A-238	ENST00000637276		H3BNG1	76 aa		10.65	□□□□□ -0.7
CACNA1A-238	ENST00000637276	LITAF	Q99732	161 aa		10.63	□□□□□ -0.71
CACNA1A-238	ENST00000637276		Q8N377	158 aa		10.62	□□□□□ -0.71
CACNA1A-238	ENST00000637276	KTN1-AS1	Q86SY8	53 aa		10.6	□□□□□ -0.71
CACNA1A-238	ENST00000637276	KRTAP10-3	P60369	221 aa		10.59	□□□□□ -0.71
CACNA1A-238	ENST00000637276	C9orf163	Q8N9P6	203 aa		10.59	□□□□□ -0.71
CACNA1A-238	ENST00000637276	C5orf42	Q9H799	3197 aa		10.58	□□□□□ -0.72
CACNA1A-238	ENST00000637276	PCNT	O95613	3336 aa		10.58	□□□□□ -0.72
CACNA1A-238	ENST00000637276	H1FX-AS1	Q4G0G2	97 aa		10.58	□□□□□ -0.72
CACNA1A-238	ENST00000637276	ATR	Q13535	2644 aa		10.57	□□□□□ -0.72
CACNA1A-238	ENST00000637276		S4R3F8	94 aa		10.57	□□□□□ -0.72
CACNA1A-238	ENST00000637276	TNP2	Q05952	138 aa		10.57	□□□□□ -0.72
CACNA1A-238	ENST00000637276	LINC00612	Q8N6U2	182 aa		10.56	□□□□□ -0.72
CACNA1A-238	ENST00000637276		Q1T7F1	81 aa		10.53	□□□□□ -0.72
CACNA1A-238	ENST00000637276		A0A1B0GW54	56 aa		10.53	□□□□□ -0.72
CACNA1A-238	ENST00000637276	KCNQ1DN	Q9H478	68 aa		10.52	□□□□□ -0.72
CACNA1A-238	ENST00000637276	LCA10	Q71F78	164 aa		10.52	□□□□□ -0.73
CACNA1A-238	ENST00000637276	CYP4F30P	Q9H0H9	118 aa		10.52	□□□□□ -0.73
CACNA1A-238	ENST00000637276	SPINK7	P58062	85 aa		10.51	□□□□□ -0.73
CACNA1A-238	ENST00000637276	PRAC1	Q96KF2	57 aa		10.51	□□□□□ -0.73
CACNA1A-238	ENST00000637276	C10orf142	B7Z368	130 aa		10.48	□□□□□ -0.73
CACNA1A-238	ENST00000637276	FLNB	O75369	2602 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-238	ENST00000637276	HECTD1	Q9ULT8	2610 aa		10.47	□□□□□ -0.73
CACNA1A-238	ENST00000637276		A0A1B0GU33	70 aa		10.47	□□□□□ -0.73
CACNA1A-238	ENST00000637276	SPRR4	Q96PI1	79 aa		10.45	□□□□□ -0.74
CACNA1A-238	ENST00000637276	MAST4	O15021	2626 aa		10.44	□□□□□ -0.74
CACNA1A-238	ENST00000637276		R4GN34	69 aa		10.43	□□□□□ -0.74
CACNA1A-238	ENST00000637276	HRES1	P13985	223 aa		10.42	□□□□□ -0.74
CACNA1A-238	ENST00000637276		H3BS24	57 aa		10.41	□□□□□ -0.74
CACNA1A-238	ENST00000637276	CFAP54	Q96N23	3096 aa		10.4	□□□□□ -0.74
CACNA1A-238	ENST00000637276		H7BZZ5	65 aa		10.4	□□□□□ -0.74
CACNA1A-238	ENST00000637276		A0A0A0MQY5	61 aa		10.37	□□□□□ -0.75
CACNA1A-238	ENST00000637276	AKAP13	Q12802	2813 aa		10.37	□□□□□ -0.75
CACNA1A-238	ENST00000637276	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.36	□□□□□ -0.75
CACNA1A-238	ENST00000637276	CSAG1	Q6PB30	78 aa		10.35	□□□□□ -0.75
CACNA1A-238	ENST00000637276	LAMA2	P24043	3122 aa	Known RBP	10.33	□□□□□ -0.76
CACNA1A-238	ENST00000637276	GIG44	P09565	113 aa	Predicted RBP	10.32	□□□□□ -0.76
CACNA1A-238	ENST00000637276		A0A1W2PNM2	257 aa		10.32	□□□□□ -0.76
CACNA1A-238	ENST00000637276	PRR34	Q9NV39	138 aa		10.31	□□□□□ -0.76
CACNA1A-238	ENST00000637276	KLKP1	Q107X0	134 aa		10.3	□□□□□ -0.76
CACNA1A-238	ENST00000637276		M0QZ58	72 aa		10.29	□□□□□ -0.76
CACNA1A-238	ENST00000637276	C19orf73	Q9NVV2	129 aa		10.28	□□□□□ -0.76
CACNA1A-238	ENST00000637276	FREM2	Q5SZK8	3169 aa		10.26	□□□□□ -0.77
CACNA1A-238	ENST00000637276		Q8N9P0	234 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNA1A-238	ENST00000637276	FAM229B	Q4G0N7	80 aa		10.24	□□□□□ -0.77
CACNA1A-238	ENST00000637276	KLK9	Q2XQG4	91 aa		10.21	□□□□□ -0.77
CACNA1A-238	ENST00000637276	ITPR3	Q14573	2671 aa		10.2	□□□□□ -0.78
CACNA1A-238	ENST00000637276		A0A0C4DFX4	3053 aa		10.19	□□□□□ -0.78
CACNA1A-238	ENST00000637276	SPATA8	Q6RVD6	105 aa		10.18	□□□□□ -0.78
CACNA1A-238	ENST00000637276	ADM2	Q7Z4H4	148 aa		10.18	□□□□□ -0.78
CACNA1A-238	ENST00000637276	XIRP2	A4UGR9	3374 aa		10.16	□□□□□ -0.78
CACNA1A-238	ENST00000637276	C20orf166-AS1	Q96NR2	134 aa		10.16	□□□□□ -0.78
CACNA1A-238	ENST00000637276	CNBP	P62633	177 aa	Known RBP	10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms