RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 Q9BRP9 147 aa3.59□□□□□ -1.83
SOX9-AS1-218ENST00000628742 Q6ZRX8 168 aa3.58□□□□□ -1.84
SOX9-AS1-218ENST00000628742 TRAPPC1Q9Y5R8 145 aa3.58□□□□□ -1.84
SOX9-AS1-218ENST00000628742 SPRR1BP22528 89 aa3.57□□□□□ -1.84
SOX9-AS1-218ENST00000628742 FABP9Q0Z7S8 132 aa3.57□□□□□ -1.84
SOX9-AS1-218ENST00000628742 TRBV10-3A0A0K0K1G6 114 aa3.56□□□□□ -1.84
SOX9-AS1-218ENST00000628742 TRBV10-2A0A0K0K1G8 114 aa3.56□□□□□ -1.84
SOX9-AS1-218ENST00000628742 COLCA2A8K830 154 aa3.56□□□□□ -1.84
SOX9-AS1-218ENST00000628742 CFC1P0CG37 223 aa3.56□□□□□ -1.84
SOX9-AS1-218ENST00000628742 GAGE2AQ6NT46 116 aa3.56□□□□□ -1.84
SOX9-AS1-218ENST00000628742 YPEL4Q96NS1 127 aa3.56□□□□□ -1.84
SOX9-AS1-218ENST00000628742 ETDCA0A1B0GVM5 59 aa3.55□□□□□ -1.84
SOX9-AS1-218ENST00000628742 C11orf86A6NJI1 115 aa3.55□□□□□ -1.84
SOX9-AS1-218ENST00000628742 IGLV6-57P01721 117 aa3.55□□□□□ -1.84
SOX9-AS1-218ENST00000628742 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
SOX9-AS1-218ENST00000628742 CD164Q04900 197 aa3.55□□□□□ -1.84
SOX9-AS1-218ENST00000628742 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
SOX9-AS1-218ENST00000628742 IGLV9-49A0A0B4J1Y8 123 aa3.54□□□□□ -1.84
SOX9-AS1-218ENST00000628742 KIAA1644Q3SXP7 199 aa3.54□□□□□ -1.84
SOX9-AS1-218ENST00000628742 BOD1L2Q8IYS8 172 aa3.54□□□□□ -1.84
SOX9-AS1-218ENST00000628742 Q8N9P0 234 aaPredicted RBP3.54□□□□□ -1.84
SOX9-AS1-218ENST00000628742 URB1-AS1Q96HZ7 61 aa3.54□□□□□ -1.84
SOX9-AS1-218ENST00000628742 LIMD2Q9BT23 127 aa3.54□□□□□ -1.84
SOX9-AS1-218ENST00000628742 TMEM223A0PJW6 202 aa3.53□□□□□ -1.84
SOX9-AS1-218ENST00000628742 M0R2T5 61 aa3.53□□□□□ -1.84
SOX9-AS1-218ENST00000628742 TRGC2P03986 189 aa3.53□□□□□ -1.84
SOX9-AS1-218ENST00000628742 LINC00158P58513 81 aa3.52□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HERV-K104P63124 156 aa3.52□□□□□ -1.85
SOX9-AS1-218ENST00000628742 BAGE3Q86Y29 109 aa3.52□□□□□ -1.85
SOX9-AS1-218ENST00000628742 MIR7-3HGQ8N6C7 128 aa3.52□□□□□ -1.85
SOX9-AS1-218ENST00000628742 TRAV12-1A0A0B4J245 112 aa3.51□□□□□ -1.85
SOX9-AS1-218ENST00000628742 LINC00587B1AMM8 73 aa3.51□□□□□ -1.85
SOX9-AS1-218ENST00000628742 NDUFC2O95298 119 aa3.51□□□□□ -1.85
SOX9-AS1-218ENST00000628742 LINC00614P0C842 121 aa3.51□□□□□ -1.85
SOX9-AS1-218ENST00000628742 SMIM13P0DJ93 91 aa3.51□□□□□ -1.85
SOX9-AS1-218ENST00000628742 C9orf92A6NGG3 77 aa3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 NCR3O14931 201 aa3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HBDP02042 147 aa3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 S100A6P06703 90 aa3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 DDTP30046 118 aa3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 JOSD1Q15040 202 aaPredicted RBP3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 C18orf32Q8TCD1 76 aa3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 CHCHD1Q96BP2 118 aaKnown RBP3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 SPANXB1Q9NS25 103 aaPredicted RBP3.5□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BKO60814 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BJP06899 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BOP23527 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BBP33778 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 NDUFA6P56556 154 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BDP58876 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BCP62807 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST2H2BEQ16778 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 TMEM170BQ5T4T1 132 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BHQ93079 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BNQ99877 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HIST1H2BMQ99879 126 aa3.49□□□□□ -1.85
SOX9-AS1-218ENST00000628742 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
SOX9-AS1-218ENST00000628742 HSBP1O75506 76 aa3.48□□□□□ -1.85
SOX9-AS1-218ENST00000628742 MT2AP02795 61 aa3.48□□□□□ -1.85
SOX9-AS1-218ENST00000628742 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
SOX9-AS1-218ENST00000628742 S100A12P80511 92 aa3.48□□□□□ -1.85
SOX9-AS1-218ENST00000628742 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
SOX9-AS1-218ENST00000628742 A0A0U1RRA0 63 aa3.47□□□□□ -1.85
SOX9-AS1-218ENST00000628742 ZNF73O43830 326 aaPredicted RBP3.47□□□□□ -1.85
SOX9-AS1-218ENST00000628742 SERF1AO75920 110 aa3.47□□□□□ -1.85
SOX9-AS1-218ENST00000628742 C9orf153Q5TBE3 101 aa3.47□□□□□ -1.85
SOX9-AS1-218ENST00000628742 SLC25A34Q6PIV7 304 aa3.47□□□□□ -1.85
SOX9-AS1-218ENST00000628742 TRAV23DV6A0A075B6W5 121 aa3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 S100A2P29034 98 aa3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 TSPEAR-AS2P59090 65 aa3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 COA6Q5JTJ3 125 aaKnown RBP3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 SMIM29Q86T20 159 aa3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 MAP1LC3CQ9BXW4 147 aa3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 HSPB8Q9UJY1 196 aa3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 CHTOPQ9Y3Y2 248 aaKnown RBP3.46□□□□□ -1.86
SOX9-AS1-218ENST00000628742 MYMXA0A1B0GTQ4 84 aa3.45□□□□□ -1.86
SOX9-AS1-218ENST00000628742 LEPROTL1O95214 131 aa3.45□□□□□ -1.86
SOX9-AS1-218ENST00000628742 PMCHL1Q16048 86 aa3.45□□□□□ -1.86
SOX9-AS1-218ENST00000628742 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
SOX9-AS1-218ENST00000628742 SOSTDC1Q6X4U4 206 aa3.45□□□□□ -1.86
SOX9-AS1-218ENST00000628742 Q75L30 129 aa3.45□□□□□ -1.86
SOX9-AS1-218ENST00000628742 DHRS4-AS1Q9P1J3 65 aa3.45□□□□□ -1.86
SOX9-AS1-218ENST00000628742 IGLV5-48A0A075B6I7 105 aa3.44□□□□□ -1.86
SOX9-AS1-218ENST00000628742 MT1FP04733 61 aa3.44□□□□□ -1.86
SOX9-AS1-218ENST00000628742 FABP4P15090 132 aa3.44□□□□□ -1.86
SOX9-AS1-218ENST00000628742 SNRPEP62304 92 aaKnown RBP3.44□□□□□ -1.86
SOX9-AS1-218ENST00000628742 PRO1933Q9H354 126 aa3.44□□□□□ -1.86
SOX9-AS1-218ENST00000628742 NMUP48645 174 aa3.43□□□□□ -1.86
SOX9-AS1-218ENST00000628742 AKR1D1P51857 326 aa3.43□□□□□ -1.86
SOX9-AS1-218ENST00000628742 ELOF1P60002 83 aaKnown RBP3.43□□□□□ -1.86
SOX9-AS1-218ENST00000628742 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
SOX9-AS1-218ENST00000628742 IFI27L1Q96BM0 104 aa3.43□□□□□ -1.86
SOX9-AS1-218ENST00000628742 LAMTOR3Q9UHA4 124 aa3.43□□□□□ -1.86
SOX9-AS1-218ENST00000628742 CBY1Q9Y3M2 126 aa3.43□□□□□ -1.86
SOX9-AS1-218ENST00000628742 TRBV7-6A0A0J9YX20 115 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms