RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 H3BMG7 143 aa6.11□□□□□ -1.43
PDLIM5-223ENST00000627587 TCL1BO95988 128 aa6.11□□□□□ -1.43
PDLIM5-223ENST00000627587 RPL28P46779 137 aaKnown RBP6.11□□□□□ -1.43
PDLIM5-223ENST00000627587 C9orf129Q5T035 196 aaKnown RBP6.11□□□□□ -1.43
PDLIM5-223ENST00000627587 VPREB1P12018 145 aa6.11□□□□□ -1.43
PDLIM5-223ENST00000627587 GAGE2BQ13066 116 aa6.11□□□□□ -1.43
PDLIM5-223ENST00000627587 SMIM11BQ8TCY0 68 aa6.11□□□□□ -1.43
PDLIM5-223ENST00000627587 KRTAP10-2P60368 255 aa6.1□□□□□ -1.43
PDLIM5-223ENST00000627587 Q8N814 137 aa6.1□□□□□ -1.43
PDLIM5-223ENST00000627587 A0A087WTM6 91 aa6.09□□□□□ -1.43
PDLIM5-223ENST00000627587 ATXN8Q156A1 80 aa6.09□□□□□ -1.43
PDLIM5-223ENST00000627587 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.44
PDLIM5-223ENST00000627587 M0R378 163 aa6.09□□□□□ -1.44
PDLIM5-223ENST00000627587 INAFM2P0DMQ5 153 aa6.09□□□□□ -1.44
PDLIM5-223ENST00000627587 KRTAP7-1Q8IUC3 87 aa6.09□□□□□ -1.44
PDLIM5-223ENST00000627587 PKIGQ9Y2B9 76 aa6.09□□□□□ -1.44
PDLIM5-223ENST00000627587 IGLV6-57P01721 117 aa6.08□□□□□ -1.44
PDLIM5-223ENST00000627587 NKAPP1Q8N9T2 125 aa6.08□□□□□ -1.44
PDLIM5-223ENST00000627587 CLEC2BQ92478 149 aa6.08□□□□□ -1.44
PDLIM5-223ENST00000627587 PLA2G2DQ9UNK4 145 aa6.08□□□□□ -1.44
PDLIM5-223ENST00000627587 HERC1Q15751 4861 aa6.08□□□□□ -1.44
PDLIM5-223ENST00000627587 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 K7ERU9 68 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 MTURNQ8N3F0 131 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 C9orf163Q8N9P6 203 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 F8W1H4 67 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 H0YGX0 51 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 LST1O00453 97 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 OCIAD2Q56VL3 154 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
PDLIM5-223ENST00000627587 A0A096LNI7 61 aa6.06□□□□□ -1.44
PDLIM5-223ENST00000627587 FAM168BA1KXE4 195 aa6.06□□□□□ -1.44
PDLIM5-223ENST00000627587 PRO0461Q9UI25 63 aa6.06□□□□□ -1.44
PDLIM5-223ENST00000627587 IGLV5-37A0A075B6J1 123 aa6.05□□□□□ -1.44
PDLIM5-223ENST00000627587 TRAV23DV6A0A075B6W5 121 aa6.05□□□□□ -1.44
PDLIM5-223ENST00000627587 IGKV2-24A0A0C4DH68 120 aa6.05□□□□□ -1.44
PDLIM5-223ENST00000627587 LINC01620Q4KN68 170 aa6.05□□□□□ -1.44
PDLIM5-223ENST00000627587 C6orf99Q4VX62 202 aa6.05□□□□□ -1.44
PDLIM5-223ENST00000627587 FAM218AQ96MZ4 157 aa6.05□□□□□ -1.44
PDLIM5-223ENST00000627587 FAT1Q14517 4588 aa6.05□□□□□ -1.44
PDLIM5-223ENST00000627587 C9JAW5 83 aa6.05□□□□□ -1.44
PDLIM5-223ENST00000627587 XGP55808 180 aa6.04□□□□□ -1.44
PDLIM5-223ENST00000627587 FAM19A5Q7Z5A7 132 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-223ENST00000627587 TRACP01848 142 aa6.03□□□□□ -1.44
PDLIM5-223ENST00000627587 FUSP35637 526 aaKnown RBP eCLIP6.03□□□□□ -1.44
PDLIM5-223ENST00000627587 SDIM1Q6ZPB5 146 aa6.03□□□□□ -1.44
PDLIM5-223ENST00000627587 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
PDLIM5-223ENST00000627587 DIRC1Q969H9 104 aa6.03□□□□□ -1.44
PDLIM5-223ENST00000627587 LINC00474Q9P2X8 69 aa6.03□□□□□ -1.44
PDLIM5-223ENST00000627587 C22orf24Q9Y442 160 aa6.03□□□□□ -1.44
PDLIM5-223ENST00000627587 SLC25A20O43772 301 aa6.02□□□□□ -1.44
PDLIM5-223ENST00000627587 ZNF73O43830 326 aaPredicted RBP6.02□□□□□ -1.44
PDLIM5-223ENST00000627587 Q5VSD8 79 aa6.02□□□□□ -1.44
PDLIM5-223ENST00000627587 MRPL55Q7Z7F7 128 aaKnown RBP6.02□□□□□ -1.44
PDLIM5-223ENST00000627587 PANO1I0J062 215 aa6.02□□□□□ -1.45
PDLIM5-223ENST00000627587 DNAL4O96015 105 aa6.02□□□□□ -1.45
PDLIM5-223ENST00000627587 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
PDLIM5-223ENST00000627587 A0A087WYN8 130 aa6.01□□□□□ -1.45
PDLIM5-223ENST00000627587 A0A1W2PNN7 141 aa6.01□□□□□ -1.45
PDLIM5-223ENST00000627587 SNCGO76070 127 aa6.01□□□□□ -1.45
PDLIM5-223ENST00000627587 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
PDLIM5-223ENST00000627587 C5orf47Q569G3 176 aa6.01□□□□□ -1.45
PDLIM5-223ENST00000627587 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
PDLIM5-223ENST00000627587 IGLV5-52A0A0A0MRZ9 124 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 A0A1B0GX51 115 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 M0QXV9 152 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 LINC00167Q96N53 147 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 IGLV1-50A0A075B6I6 118 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 TRBV7-6A0A0J9YX20 115 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 RPL37AP8A6NKH3 93 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 H3BT86 120 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 KRTAP10-1P60331 282 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 ANKRD29Q8N6D5 301 aa6□□□□□ -1.45
PDLIM5-223ENST00000627587 PRYO14603 147 aa5.99□□□□□ -1.45
PDLIM5-223ENST00000627587 COX7BP24311 80 aa5.99□□□□□ -1.45
PDLIM5-223ENST00000627587 ETDBQ3ZM63 59 aa5.99□□□□□ -1.45
PDLIM5-223ENST00000627587 ELOF1P60002 83 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-223ENST00000627587 LINC00575Q6W349 94 aa5.98□□□□□ -1.45
PDLIM5-223ENST00000627587 DPH3Q96FX2 82 aa5.98□□□□□ -1.45
PDLIM5-223ENST00000627587 LINC01600Q96MT4 127 aa5.98□□□□□ -1.45
PDLIM5-223ENST00000627587 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-223ENST00000627587 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
PDLIM5-223ENST00000627587 hADV29S1A0JD25 119 aa5.97□□□□□ -1.45
PDLIM5-223ENST00000627587 SPACA4Q8TDM5 124 aa5.97□□□□□ -1.45
PDLIM5-223ENST00000627587 KRTAP4-16G5E9R7 235 aaPredicted RBP5.96□□□□□ -1.45
PDLIM5-223ENST00000627587 SMR3BP02814 79 aaPredicted RBP5.96□□□□□ -1.45
PDLIM5-223ENST00000627587 BAALC-AS2P0C853 105 aa5.96□□□□□ -1.45
PDLIM5-223ENST00000627587 TEN1Q86WV5 123 aa5.96□□□□□ -1.45
PDLIM5-223ENST00000627587 MYCBP2O75592 4640 aa5.96□□□□□ -1.46
PDLIM5-223ENST00000627587 ETDCA0A1B0GVM5 59 aa5.96□□□□□ -1.46
PDLIM5-223ENST00000627587 KRTAP11-1Q8IUC1 163 aa5.96□□□□□ -1.46
PDLIM5-223ENST00000627587 ORMDL1Q9P0S3 153 aa5.96□□□□□ -1.46
PDLIM5-223ENST00000627587 SPRR1AP35321 89 aa5.95□□□□□ -1.46
PDLIM5-223ENST00000627587 UBE2BP63146 152 aa5.95□□□□□ -1.46
PDLIM5-223ENST00000627587 REG3GQ6UW15 175 aa5.95□□□□□ -1.46
PDLIM5-223ENST00000627587 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-223ENST00000627587 SRRM2Q9UQ35 2752 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-223ENST00000627587 PLA2G1BP04054 148 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms