RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 LINC00308Q8TCZ7 52 aa6.5□□□□□ -1.37
TARDBP-221ENST00000619555 RETNLBQ9BQ08 111 aa6.5□□□□□ -1.37
TARDBP-221ENST00000619555 TRBV10-3A0A0K0K1G6 114 aa6.49□□□□□ -1.37
TARDBP-221ENST00000619555 NDUFC2O95298 119 aa6.49□□□□□ -1.37
TARDBP-221ENST00000619555 SCGB1D1O95968 90 aa6.49□□□□□ -1.37
TARDBP-221ENST00000619555 PRLHP81277 87 aa6.49□□□□□ -1.37
TARDBP-221ENST00000619555 FAM229BQ4G0N7 80 aa6.49□□□□□ -1.37
TARDBP-221ENST00000619555 XP32Q5T750 250 aa6.49□□□□□ -1.37
TARDBP-221ENST00000619555 MIEN1Q9BRT3 115 aa6.49□□□□□ -1.37
TARDBP-221ENST00000619555 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
TARDBP-221ENST00000619555 FAM19A1Q7Z5A9 133 aa6.48□□□□□ -1.37
TARDBP-221ENST00000619555 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
TARDBP-221ENST00000619555 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
TARDBP-221ENST00000619555 SPANXB1Q9NS25 103 aaPredicted RBP6.48□□□□□ -1.37
TARDBP-221ENST00000619555 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
TARDBP-221ENST00000619555 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
TARDBP-221ENST00000619555 SPRR1AP35321 89 aa6.47□□□□□ -1.37
TARDBP-221ENST00000619555 SCGB1D4Q6XE38 83 aa6.47□□□□□ -1.37
TARDBP-221ENST00000619555 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
TARDBP-221ENST00000619555 A0A0U1RQV1 116 aa6.46□□□□□ -1.38
TARDBP-221ENST00000619555 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.38
TARDBP-221ENST00000619555 PRYO14603 147 aa6.46□□□□□ -1.38
TARDBP-221ENST00000619555 HSBP1L1C9JCN9 74 aa6.45□□□□□ -1.38
TARDBP-221ENST00000619555 IGLV6-57P01721 117 aa6.45□□□□□ -1.38
TARDBP-221ENST00000619555 DDTP30046 118 aa6.45□□□□□ -1.38
TARDBP-221ENST00000619555 JOSD1Q15040 202 aaPredicted RBP6.44□□□□□ -1.38
TARDBP-221ENST00000619555 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
TARDBP-221ENST00000619555 MUSTN1Q8IVN3 82 aa6.43□□□□□ -1.38
TARDBP-221ENST00000619555 C3orf22Q8N5N4 141 aa6.43□□□□□ -1.38
TARDBP-221ENST00000619555 LINC00337Q8N6G1 96 aa6.43□□□□□ -1.38
TARDBP-221ENST00000619555 COX8AP10176 69 aa6.42□□□□□ -1.38
TARDBP-221ENST00000619555 PYY3Q5JQD4 70 aa6.42□□□□□ -1.38
TARDBP-221ENST00000619555 S100A7L2Q5SY68 101 aa6.42□□□□□ -1.38
TARDBP-221ENST00000619555 HIGD2AQ9BW72 106 aa6.42□□□□□ -1.38
TARDBP-221ENST00000619555 CDIP1Q9H305 208 aa6.42□□□□□ -1.38
TARDBP-221ENST00000619555 PAM16Q9Y3D7 125 aa6.42□□□□□ -1.38
TARDBP-221ENST00000619555 TRAV23DV6A0A075B6W5 121 aa6.41□□□□□ -1.38
TARDBP-221ENST00000619555 B5MCH6 92 aa6.41□□□□□ -1.38
TARDBP-221ENST00000619555 IFITM1P13164 125 aa6.41□□□□□ -1.38
TARDBP-221ENST00000619555 PPDPFQ9H3Y8 114 aa6.41□□□□□ -1.38
TARDBP-221ENST00000619555 ETDCA0A1B0GVM5 59 aa6.4□□□□□ -1.38
TARDBP-221ENST00000619555 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
TARDBP-221ENST00000619555 SPATA45Q537H7 98 aa6.4□□□□□ -1.38
TARDBP-221ENST00000619555 Q6ZVH6 145 aa6.4□□□□□ -1.38
TARDBP-221ENST00000619555 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
TARDBP-221ENST00000619555 C14orf144Q96I85 54 aa6.4□□□□□ -1.38
TARDBP-221ENST00000619555 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
TARDBP-221ENST00000619555 ERC2-IT1O76042 136 aa6.39□□□□□ -1.39
TARDBP-221ENST00000619555 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
TARDBP-221ENST00000619555 SPRR4Q96PI1 79 aa6.39□□□□□ -1.39
TARDBP-221ENST00000619555 Q9BRP9 147 aa6.39□□□□□ -1.39
TARDBP-221ENST00000619555 VAMP8Q9BV40 100 aa6.39□□□□□ -1.39
TARDBP-221ENST00000619555 DLEU1O43261 78 aa6.38□□□□□ -1.39
TARDBP-221ENST00000619555 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
TARDBP-221ENST00000619555 CTAG1AP78358 180 aa6.38□□□□□ -1.39
TARDBP-221ENST00000619555 Q6ZRX8 168 aa6.38□□□□□ -1.39
TARDBP-221ENST00000619555 S100A12P80511 92 aa6.37□□□□□ -1.39
TARDBP-221ENST00000619555 C2orf91Q6ZV80 131 aa6.37□□□□□ -1.39
TARDBP-221ENST00000619555 LINC00518Q8N0U6 118 aa6.37□□□□□ -1.39
TARDBP-221ENST00000619555 SPAG11AQ6PDA7 123 aa6.36□□□□□ -1.39
TARDBP-221ENST00000619555 COPS9Q8WXC6 57 aa6.36□□□□□ -1.39
TARDBP-221ENST00000619555 A4D1N5 150 aa6.35□□□□□ -1.39
TARDBP-221ENST00000619555 C6orf99Q4VX62 202 aa6.34□□□□□ -1.39
TARDBP-221ENST00000619555 Q8NBF4 154 aa6.34□□□□□ -1.39
TARDBP-221ENST00000619555 ZNF706Q9Y5V0 76 aaPredicted RBP6.34□□□□□ -1.39
TARDBP-221ENST00000619555 A6NDN8 102 aa6.33□□□□□ -1.4
TARDBP-221ENST00000619555 SLC25A34Q6PIV7 304 aa6.33□□□□□ -1.4
TARDBP-221ENST00000619555 HIST1H4GQ99525 98 aa6.33□□□□□ -1.4
TARDBP-221ENST00000619555 C12orf57Q99622 126 aa6.33□□□□□ -1.4
TARDBP-221ENST00000619555 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
TARDBP-221ENST00000619555 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
TARDBP-221ENST00000619555 FP248Q71RG6 208 aaPredicted RBP6.32□□□□□ -1.4
TARDBP-221ENST00000619555 SMIM11BQ8TCY0 68 aa6.32□□□□□ -1.4
TARDBP-221ENST00000619555 HIGD1BQ9P298 99 aa6.32□□□□□ -1.4
TARDBP-221ENST00000619555 TRAV13-2A0A0B4J235 113 aa6.31□□□□□ -1.4
TARDBP-221ENST00000619555 ST20-AS1Q8NBB2 130 aa6.31□□□□□ -1.4
TARDBP-221ENST00000619555 CBY1Q9Y3M2 126 aa6.31□□□□□ -1.4
TARDBP-221ENST00000619555 COX7BP24311 80 aa6.3□□□□□ -1.4
TARDBP-221ENST00000619555 KRTAP13-3Q3SY46 172 aa6.3□□□□□ -1.4
TARDBP-221ENST00000619555 GAGE2AQ6NT46 116 aa6.3□□□□□ -1.4
TARDBP-221ENST00000619555 HINT1P49773 126 aaPredicted RBP6.29□□□□□ -1.4
TARDBP-221ENST00000619555 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
TARDBP-221ENST00000619555 SPINK1P00995 79 aa6.28□□□□□ -1.4
TARDBP-221ENST00000619555 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
TARDBP-221ENST00000619555 CFC1P0CG37 223 aa6.28□□□□□ -1.4
TARDBP-221ENST00000619555 TRBV7-6A0A0J9YX20 115 aa6.27□□□□□ -1.41
TARDBP-221ENST00000619555 A0A1B0GWB2 263 aa6.27□□□□□ -1.41
TARDBP-221ENST00000619555 CEND1Q8N111 149 aa6.27□□□□□ -1.41
TARDBP-221ENST00000619555 DHRS4-AS1Q9P1J3 65 aa6.27□□□□□ -1.41
TARDBP-221ENST00000619555 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
TARDBP-221ENST00000619555 FXYD2P54710 66 aa6.26□□□□□ -1.41
TARDBP-221ENST00000619555 MOBPQ13875 183 aa6.26□□□□□ -1.41
TARDBP-221ENST00000619555 TAL2Q16559 108 aa6.26□□□□□ -1.41
TARDBP-221ENST00000619555 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
TARDBP-221ENST00000619555 KRTAP4-1Q9BYQ7 146 aa6.26□□□□□ -1.41
TARDBP-221ENST00000619555 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
TARDBP-221ENST00000619555 SPRR1BP22528 89 aa6.24□□□□□ -1.41
TARDBP-221ENST00000619555 LINC01547P58512 204 aaPredicted RBP6.24□□□□□ -1.41
TARDBP-221ENST00000619555 SSBP3-AS1Q7Z2R9 100 aa6.24□□□□□ -1.41
TARDBP-221ENST00000619555 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 352.6 ms