RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 Q5XG85 94 aa13.76□□□□□ -0.21
PCSK6-217ENST00000618548 OXTP01178 125 aa13.75□□□□□ -0.21
PCSK6-217ENST00000618548 REG3GQ6UW15 175 aa13.75□□□□□ -0.21
PCSK6-217ENST00000618548 CASC2Q6XLA1 102 aa13.74□□□□□ -0.21
PCSK6-217ENST00000618548 WIPF1O43516 503 aa13.73□□□□□ -0.21
PCSK6-217ENST00000618548 GVQW2A0A096LPI5 108 aaPredicted RBP13.73□□□□□ -0.21
PCSK6-217ENST00000618548 H0Y9P7 68 aa13.73□□□□□ -0.21
PCSK6-217ENST00000618548 ST20-AS1Q8NBB2 130 aa13.73□□□□□ -0.21
PCSK6-217ENST00000618548 TEX15Q9BXT5 2789 aa13.73□□□□□ -0.21
PCSK6-217ENST00000618548 LINC00528Q8N1L1 170 aa13.72□□□□□ -0.21
PCSK6-217ENST00000618548 Q8NBF4 154 aa13.72□□□□□ -0.21
PCSK6-217ENST00000618548 ERC2-IT1O76042 136 aa13.72□□□□□ -0.21
PCSK6-217ENST00000618548 Q6ZRP5 223 aa13.71□□□□□ -0.21
PCSK6-217ENST00000618548 PRLHP81277 87 aa13.71□□□□□ -0.21
PCSK6-217ENST00000618548 CR1P17927 2039 aa13.71□□□□□ -0.22
PCSK6-217ENST00000618548 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
PCSK6-217ENST00000618548 PCOTHQ58A44 107 aa13.7□□□□□ -0.22
PCSK6-217ENST00000618548 UNC79Q9P2D8 2635 aa13.7□□□□□ -0.22
PCSK6-217ENST00000618548 FLNCQ14315 2725 aa13.69□□□□□ -0.22
PCSK6-217ENST00000618548 HECTD1Q9ULT8 2610 aa13.68□□□□□ -0.22
PCSK6-217ENST00000618548 Q9BRP9 147 aa13.67□□□□□ -0.22
PCSK6-217ENST00000618548 Q8NAQ8 132 aa13.66□□□□□ -0.22
PCSK6-217ENST00000618548 Q6ZRX8 168 aa13.66□□□□□ -0.22
PCSK6-217ENST00000618548 K7EQZ3 153 aa13.64□□□□□ -0.23
PCSK6-217ENST00000618548 Q8NDZ9 215 aa13.64□□□□□ -0.23
PCSK6-217ENST00000618548 hDV103S1A0JD37 113 aa13.64□□□□□ -0.23
PCSK6-217ENST00000618548 IGLV9-49A0A0B4J1Y8 123 aa13.63□□□□□ -0.23
PCSK6-217ENST00000618548 PRR34Q9NV39 138 aa13.63□□□□□ -0.23
PCSK6-217ENST00000618548 LINC00612Q8N6U2 182 aa13.62□□□□□ -0.23
PCSK6-217ENST00000618548 C1orf64Q8NEQ6 169 aa13.61□□□□□ -0.23
PCSK6-217ENST00000618548 F8WDY8 70 aa13.61□□□□□ -0.23
PCSK6-217ENST00000618548 Q8N377 158 aa13.61□□□□□ -0.23
PCSK6-217ENST00000618548 LINC00476Q8WZB0 136 aa13.61□□□□□ -0.23
PCSK6-217ENST00000618548 SERTAD4-AS1Q5TG53 156 aa13.6□□□□□ -0.23
PCSK6-217ENST00000618548 SPINK6Q6UWN8 80 aa13.6□□□□□ -0.23
PCSK6-217ENST00000618548 A0A1B0GW54 56 aa13.6□□□□□ -0.23
PCSK6-217ENST00000618548 A8MUN3 132 aa13.59□□□□□ -0.23
PCSK6-217ENST00000618548 DMDP11532 3685 aa13.59□□□□□ -0.23
PCSK6-217ENST00000618548 LINC01556Q5JQF7 62 aa13.58□□□□□ -0.24
PCSK6-217ENST00000618548 ZANQ9Y493 2812 aa13.58□□□□□ -0.24
PCSK6-217ENST00000618548 RPL37AP61513 92 aaKnown RBP13.58□□□□□ -0.24
PCSK6-217ENST00000618548 C14orf177Q52M58 125 aa13.58□□□□□ -0.24
PCSK6-217ENST00000618548 FP248Q71RG6 208 aaPredicted RBP13.57□□□□□ -0.24
PCSK6-217ENST00000618548 FAM168BA1KXE4 195 aa13.56□□□□□ -0.24
PCSK6-217ENST00000618548 HRNRQ86YZ3 2850 aaPredicted RBP13.55□□□□□ -0.24
PCSK6-217ENST00000618548 LIMD2Q9BT23 127 aa13.55□□□□□ -0.24
PCSK6-217ENST00000618548 KCNQ1DNQ9H478 68 aa13.54□□□□□ -0.24
PCSK6-217ENST00000618548 A0A0G2JQZ4 141 aa13.54□□□□□ -0.24
PCSK6-217ENST00000618548 A0A1W2PNN7 141 aa13.54□□□□□ -0.24
PCSK6-217ENST00000618548 MUC3AQ02505 3323 aa13.54□□□□□ -0.24
PCSK6-217ENST00000618548 OCR1Q9BZK8 76 aa13.53□□□□□ -0.24
PCSK6-217ENST00000618548 CSMD1Q96PZ7 3565 aa13.52□□□□□ -0.25
PCSK6-217ENST00000618548 C15orf56Q8N910 161 aa13.51□□□□□ -0.25
PCSK6-217ENST00000618548 IGHV6-1A0A0B4J1U7 121 aa13.5□□□□□ -0.25
PCSK6-217ENST00000618548 LAMA5O15230 3695 aa13.5□□□□□ -0.25
PCSK6-217ENST00000618548 A0A1W2PNM2 257 aa13.49□□□□□ -0.25
PCSK6-217ENST00000618548 SMG1Q96Q15 3661 aaKnown RBP13.49□□□□□ -0.25
PCSK6-217ENST00000618548 MGAM2Q2M2H8 2515 aa13.48□□□□□ -0.25
PCSK6-217ENST00000618548 TRAV22A0A0B4J277 110 aa13.47□□□□□ -0.25
PCSK6-217ENST00000618548 FAM229BQ4G0N7 80 aa13.47□□□□□ -0.25
PCSK6-217ENST00000618548 EPM2AB3EWF7 344 aa13.46□□□□□ -0.25
PCSK6-217ENST00000618548 RELNP78509 3460 aa13.46□□□□□ -0.25
PCSK6-217ENST00000618548 H3BNG1 76 aa13.44□□□□□ -0.26
PCSK6-217ENST00000618548 SPAG11AQ6PDA7 123 aa13.43□□□□□ -0.26
PCSK6-217ENST00000618548 SETXQ7Z333 2677 aaKnown RBP13.43□□□□□ -0.26
PCSK6-217ENST00000618548 IGLV1-50A0A075B6I6 118 aa13.43□□□□□ -0.26
PCSK6-217ENST00000618548 IGSF10Q6WRI0 2623 aa13.41□□□□□ -0.26
PCSK6-217ENST00000618548 KRTAP10-3P60369 221 aa13.39□□□□□ -0.27
PCSK6-217ENST00000618548 UBR5O95071 2799 aaPredicted RBP13.39□□□□□ -0.27
PCSK6-217ENST00000618548 IGFL1Q6UW32 110 aa13.38□□□□□ -0.27
PCSK6-217ENST00000618548 DCHS2Q6V1P9 2916 aa13.37□□□□□ -0.27
PCSK6-217ENST00000618548 IGLV5-48A0A075B6I7 105 aa13.37□□□□□ -0.27
PCSK6-217ENST00000618548 FBN2P35556 2912 aa13.34□□□□□ -0.27
PCSK6-217ENST00000618548 H3BPC8 53 aa13.34□□□□□ -0.27
PCSK6-217ENST00000618548 MAST4O15021 2626 aa13.33□□□□□ -0.28
PCSK6-217ENST00000618548 NF1P21359 2839 aa13.32□□□□□ -0.28
PCSK6-217ENST00000618548 PHF5AQ7RTV0 110 aaKnown RBP13.32□□□□□ -0.28
PCSK6-217ENST00000618548 LINC00588Q9Y4M8 146 aa13.31□□□□□ -0.28
PCSK6-217ENST00000618548 KRTAP1-3Q8IUG1 177 aa13.31□□□□□ -0.28
PCSK6-217ENST00000618548 UTP20O75691 2785 aaKnown RBP13.3□□□□□ -0.28
PCSK6-217ENST00000618548 DSCR10P59022 87 aa13.29□□□□□ -0.28
PCSK6-217ENST00000618548 COA5Q86WW8 74 aa13.28□□□□□ -0.28
PCSK6-217ENST00000618548 ZNF706Q9Y5V0 76 aaPredicted RBP13.28□□□□□ -0.28
PCSK6-217ENST00000618548 DNAH10OSP0CZ25 163 aa13.27□□□□□ -0.28
PCSK6-217ENST00000618548 CHTF8P0CG12 524 aa13.27□□□□□ -0.28
PCSK6-217ENST00000618548 NOTCH1P46531 2555 aa13.27□□□□□ -0.29
PCSK6-217ENST00000618548 TEP1Q99973 2627 aaKnown RBP13.26□□□□□ -0.29
PCSK6-217ENST00000618548 A8MWP4 228 aa13.26□□□□□ -0.29
PCSK6-217ENST00000618548 RETNLBQ9BQ08 111 aa13.25□□□□□ -0.29
PCSK6-217ENST00000618548 PRR15Q8IV56 129 aa13.25□□□□□ -0.29
PCSK6-217ENST00000618548 CASC10Q5T4H9 136 aa13.24□□□□□ -0.29
PCSK6-217ENST00000618548 HELZ2Q9BYK8 2649 aaKnown RBP13.24□□□□□ -0.29
PCSK6-217ENST00000618548 TP53AIP1Q9HCN2 124 aa13.23□□□□□ -0.29
PCSK6-217ENST00000618548 Q1T7F1 81 aa13.23□□□□□ -0.29
PCSK6-217ENST00000618548 CIRBP-AS1Q8TBR5 109 aa13.22□□□□□ -0.29
PCSK6-217ENST00000618548 CRYBG3Q68DQ2 2970 aa13.22□□□□□ -0.29
PCSK6-217ENST00000618548 CELSR2Q9HCU4 2923 aa13.22□□□□□ -0.29
PCSK6-217ENST00000618548 C16orf90A8MZG2 172 aa13.21□□□□□ -0.3
PCSK6-217ENST00000618548 BAHCC1Q9P281 2608 aa13.2□□□□□ -0.3
PCSK6-217ENST00000618548 CYP4F30PQ9H0H9 118 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms