RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 KRTAP15-1Q3LI76 137 aa2.37□□□□□ -2.03
SNCA-213ENST00000618500 SLC25A34Q6PIV7 304 aa2.37□□□□□ -2.03
SNCA-213ENST00000618500 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 C10orf91Q5T1B1 145 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 SLC51BQ86UW2 128 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 Q75L30 129 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 SMIM7Q9BQ49 75 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 ETDCA0A1B0GVM5 59 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 S100A12P80511 92 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 TMEM136Q6ZRR5 245 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 Q6ZRX8 168 aa2.36□□□□□ -2.03
SNCA-213ENST00000618500 ZNF625Q96I27 306 aaPredicted RBP2.36□□□□□ -2.03
SNCA-213ENST00000618500 C20orf202A1L168 122 aa2.35□□□□□ -2.03
SNCA-213ENST00000618500 SRP19P09132 144 aaKnown RBP2.35□□□□□ -2.03
SNCA-213ENST00000618500 MT1FP04733 61 aa2.35□□□□□ -2.03
SNCA-213ENST00000618500 RPL23P62829 140 aaKnown RBP2.35□□□□□ -2.03
SNCA-213ENST00000618500 CST9LQ9H4G1 147 aa2.35□□□□□ -2.03
SNCA-213ENST00000618500 NAT8Q9UHE5 227 aa2.35□□□□□ -2.03
SNCA-213ENST00000618500 JOSD1Q15040 202 aaPredicted RBP2.34□□□□□ -2.03
SNCA-213ENST00000618500 C6orf99Q4VX62 202 aa2.34□□□□□ -2.03
SNCA-213ENST00000618500 PMVKQ15126 192 aa2.34□□□□□ -2.03
SNCA-213ENST00000618500 Q9BRP9 147 aa2.34□□□□□ -2.03
SNCA-213ENST00000618500 IGLV9-49A0A0B4J1Y8 123 aa2.34□□□□□ -2.04
SNCA-213ENST00000618500 LINC00587B1AMM8 73 aa2.34□□□□□ -2.04
SNCA-213ENST00000618500 HERV-K104P63124 156 aa2.34□□□□□ -2.04
SNCA-213ENST00000618500 ZC2HC1BQ5TFG8 222 aa2.34□□□□□ -2.04
SNCA-213ENST00000618500 SYNE2Q8WXH0 6885 aaKnown RBP2.33□□□□□ -2.04
SNCA-213ENST00000618500 RAB5BP61020 215 aa2.33□□□□□ -2.04
SNCA-213ENST00000618500 TCTE3Q8IZS6 198 aa2.33□□□□□ -2.04
SNCA-213ENST00000618500 SPINK8P0C7L1 97 aa2.33□□□□□ -2.04
SNCA-213ENST00000618500 C9orf92A6NGG3 77 aa2.32□□□□□ -2.04
SNCA-213ENST00000618500 NDUFC2O95298 119 aa2.32□□□□□ -2.04
SNCA-213ENST00000618500 ZNF22P17026 224 aaPredicted RBP2.32□□□□□ -2.04
SNCA-213ENST00000618500 C1orf195Q5TG92 126 aa2.32□□□□□ -2.04
SNCA-213ENST00000618500 ERC2-IT1O76042 136 aa2.32□□□□□ -2.04
SNCA-213ENST00000618500 C9orf153Q5TBE3 101 aa2.32□□□□□ -2.04
SNCA-213ENST00000618500 SCGB3A1Q96QR1 104 aa2.32□□□□□ -2.04
SNCA-213ENST00000618500 PFN2P35080 140 aa2.31□□□□□ -2.04
SNCA-213ENST00000618500 SMIM29Q86T20 159 aa2.31□□□□□ -2.04
SNCA-213ENST00000618500 SPANXB1Q9NS25 103 aaPredicted RBP2.31□□□□□ -2.04
SNCA-213ENST00000618500 TRBV10-3A0A0K0K1G6 114 aa2.31□□□□□ -2.04
SNCA-213ENST00000618500 S100A1P23297 94 aa2.31□□□□□ -2.04
SNCA-213ENST00000618500 RGS21Q2M5E4 152 aa2.31□□□□□ -2.04
SNCA-213ENST00000618500 PRO1933Q9H354 126 aa2.31□□□□□ -2.04
SNCA-213ENST00000618500 LOC389332A0A1B0GUA5 103 aa2.3□□□□□ -2.04
SNCA-213ENST00000618500 MRPL54Q6P161 138 aaKnown RBP2.3□□□□□ -2.04
SNCA-213ENST00000618500 DHRS4-AS1Q9P1J3 65 aa2.3□□□□□ -2.04
SNCA-213ENST00000618500 H7C2G1 150 aa2.3□□□□□ -2.04
SNCA-213ENST00000618500 Q1RN00 199 aa2.3□□□□□ -2.04
SNCA-213ENST00000618500 LAMTOR3Q9UHA4 124 aa2.3□□□□□ -2.04
SNCA-213ENST00000618500 DDTP30046 118 aa2.29□□□□□ -2.04
SNCA-213ENST00000618500 C20orf166-AS1Q96NR2 134 aa2.29□□□□□ -2.04
SNCA-213ENST00000618500 NDUFA6P56556 154 aa2.29□□□□□ -2.04
SNCA-213ENST00000618500 ADIRFQ15847 76 aa2.29□□□□□ -2.04
SNCA-213ENST00000618500 ATP11AUNQ6ZP68 121 aa2.29□□□□□ -2.04
SNCA-213ENST00000618500 MAP1LC3CQ9BXW4 147 aa2.29□□□□□ -2.04
SNCA-213ENST00000618500 TRBV7-6A0A0J9YX20 115 aa2.28□□□□□ -2.04
SNCA-213ENST00000618500 IFITM2Q01629 132 aa2.28□□□□□ -2.04
SNCA-213ENST00000618500 TRBV20-1A0A075B6N2 111 aa2.28□□□□□ -2.04
SNCA-213ENST00000618500 TMEM223A0PJW6 202 aa2.28□□□□□ -2.04
SNCA-213ENST00000618500 NCR3O14931 201 aa2.28□□□□□ -2.04
SNCA-213ENST00000618500 TRAV23DV6A0A075B6W5 121 aa2.28□□□□□ -2.05
SNCA-213ENST00000618500 A8MUU9 505 aa2.28□□□□□ -2.05
SNCA-213ENST00000618500 TCL1BO95988 128 aa2.28□□□□□ -2.05
SNCA-213ENST00000618500 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.05
SNCA-213ENST00000618500 LINC00158P58513 81 aa2.28□□□□□ -2.05
SNCA-213ENST00000618500 KRTAP10-10P60014 251 aa2.28□□□□□ -2.05
SNCA-213ENST00000618500 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.05
SNCA-213ENST00000618500 IGLV5-48A0A075B6I7 105 aa2.27□□□□□ -2.05
SNCA-213ENST00000618500 ADCYAP1P18509 176 aa2.27□□□□□ -2.05
SNCA-213ENST00000618500 PEA15Q15121 130 aa2.27□□□□□ -2.05
SNCA-213ENST00000618500 C5orf47Q569G3 176 aa2.27□□□□□ -2.05
SNCA-213ENST00000618500 BAGE3Q86Y29 109 aa2.27□□□□□ -2.05
SNCA-213ENST00000618500 TRAV12-1A0A0B4J245 112 aa2.27□□□□□ -2.05
SNCA-213ENST00000618500 COX19Q49B96 90 aa2.27□□□□□ -2.05
SNCA-213ENST00000618500 C11orf86A6NJI1 115 aa2.26□□□□□ -2.05
SNCA-213ENST00000618500 ZNF73O43830 326 aaPredicted RBP2.26□□□□□ -2.05
SNCA-213ENST00000618500 IGKV2-30P06310 120 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 SMIM13P0DJ93 91 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 AKR1D1P51857 326 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 Q6Q795 121 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 SOSTDC1Q6X4U4 206 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 LINC00518Q8N0U6 118 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 MIR7-3HGQ8N6C7 128 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 TEX49A0A1B0GTD5 131 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 A8MWP4 228 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 HBDP02042 147 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 NMUP48645 174 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 MYMXA0A1B0GTQ4 84 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 ZNF815PA8K554 130 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 ELOF1P60002 83 aaKnown RBP2.25□□□□□ -2.05
SNCA-213ENST00000618500 COMMD7Q86VX2 200 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 ST20-AS1Q8NBB2 130 aa2.25□□□□□ -2.05
SNCA-213ENST00000618500 A0A096LNJ9 63 aa2.24□□□□□ -2.05
SNCA-213ENST00000618500 A0A1B0GV90 55 aa2.24□□□□□ -2.05
SNCA-213ENST00000618500 V9GYY9 64 aa2.24□□□□□ -2.05
SNCA-213ENST00000618500 C9JQL5 133 aa2.24□□□□□ -2.05
SNCA-213ENST00000618500 SNAPINO95295 136 aa2.24□□□□□ -2.05
SNCA-213ENST00000618500 MT-ND4LP03901 98 aa2.24□□□□□ -2.05
SNCA-213ENST00000618500 HINT1P49773 126 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms