RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 KRTAP21-3Q3LHN1 58 aa5□□□□□ -1.61
NEK3-207ENST00000617054 Q6ZRN7 208 aaPredicted RBP5□□□□□ -1.61
NEK3-207ENST00000617054 C7orf33Q8WU49 177 aa5□□□□□ -1.61
NEK3-207ENST00000617054 PPDPFLQ8WWR9 84 aa5□□□□□ -1.61
NEK3-207ENST00000617054 ZNF73O43830 326 aaPredicted RBP5□□□□□ -1.61
NEK3-207ENST00000617054 Q8N814 137 aa5□□□□□ -1.61
NEK3-207ENST00000617054 M0R378 163 aa4.99□□□□□ -1.61
NEK3-207ENST00000617054 XGP55808 180 aa4.99□□□□□ -1.61
NEK3-207ENST00000617054 H3BT86 120 aa4.99□□□□□ -1.61
NEK3-207ENST00000617054 A0A1W2PNN7 141 aa4.99□□□□□ -1.61
NEK3-207ENST00000617054 TTC32Q5I0X7 151 aa4.98□□□□□ -1.61
NEK3-207ENST00000617054 LINC00575Q6W349 94 aa4.98□□□□□ -1.61
NEK3-207ENST00000617054 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
NEK3-207ENST00000617054 PANO1I0J062 215 aa4.98□□□□□ -1.61
NEK3-207ENST00000617054 TLX1NBP0CAT3 122 aa4.98□□□□□ -1.61
NEK3-207ENST00000617054 LINC00167Q96N53 147 aa4.98□□□□□ -1.61
NEK3-207ENST00000617054 DIRC1Q969H9 104 aa4.98□□□□□ -1.61
NEK3-207ENST00000617054 hADV29S1A0JD25 119 aa4.97□□□□□ -1.61
NEK3-207ENST00000617054 J3QR89 54 aa4.97□□□□□ -1.61
NEK3-207ENST00000617054 DPH3Q96FX2 82 aa4.97□□□□□ -1.61
NEK3-207ENST00000617054 WWC2-AS2Q96NR7 200 aa4.97□□□□□ -1.61
NEK3-207ENST00000617054 Q6ZQY7 126 aa4.97□□□□□ -1.61
NEK3-207ENST00000617054 C14orf132Q9NPU4 83 aa4.97□□□□□ -1.61
NEK3-207ENST00000617054 ORMDL1Q9P0S3 153 aa4.96□□□□□ -1.61
NEK3-207ENST00000617054 COX7BP24311 80 aa4.96□□□□□ -1.62
NEK3-207ENST00000617054 CNBPP62633 177 aaKnown RBP4.96□□□□□ -1.62
NEK3-207ENST00000617054 MRPL55Q7Z7F7 128 aaKnown RBP4.96□□□□□ -1.62
NEK3-207ENST00000617054 M0QXV9 152 aa4.95□□□□□ -1.62
NEK3-207ENST00000617054 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
NEK3-207ENST00000617054 Q6ZR54 194 aa4.95□□□□□ -1.62
NEK3-207ENST00000617054 KRTAP11-1Q8IUC1 163 aa4.95□□□□□ -1.62
NEK3-207ENST00000617054 DEFB105AQ8NG35 78 aa4.95□□□□□ -1.62
NEK3-207ENST00000617054 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
NEK3-207ENST00000617054 A0A087WTM6 91 aa4.94□□□□□ -1.62
NEK3-207ENST00000617054 ELOF1P60002 83 aaKnown RBP4.94□□□□□ -1.62
NEK3-207ENST00000617054 PHF5AQ7RTV0 110 aaKnown RBP4.94□□□□□ -1.62
NEK3-207ENST00000617054 C9orf163Q8N9P6 203 aa4.94□□□□□ -1.62
NEK3-207ENST00000617054 DNAH17Q9UFH2 4485 aa4.94□□□□□ -1.62
NEK3-207ENST00000617054 SDIM1Q6ZPB5 146 aa4.94□□□□□ -1.62
NEK3-207ENST00000617054 LINC01600Q96MT4 127 aa4.94□□□□□ -1.62
NEK3-207ENST00000617054 KCNQ1DNQ9H478 68 aa4.94□□□□□ -1.62
NEK3-207ENST00000617054 GAGE2AQ6NT46 116 aa4.93□□□□□ -1.62
NEK3-207ENST00000617054 C14orf177Q52M58 125 aa4.93□□□□□ -1.62
NEK3-207ENST00000617054 C1orf134Q5TEV5 83 aa4.93□□□□□ -1.62
NEK3-207ENST00000617054 LINC00476Q8WZB0 136 aa4.93□□□□□ -1.62
NEK3-207ENST00000617054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.93□□□□□ -1.62
NEK3-207ENST00000617054 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
NEK3-207ENST00000617054 Q9BRP9 147 aa4.92□□□□□ -1.62
NEK3-207ENST00000617054 LAMTOR3Q9UHA4 124 aa4.92□□□□□ -1.62
NEK3-207ENST00000617054 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
NEK3-207ENST00000617054 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
NEK3-207ENST00000617054 FAT2Q9NYQ8 4349 aa4.92□□□□□ -1.62
NEK3-207ENST00000617054 DNAH5Q8TE73 4624 aa4.91□□□□□ -1.62
NEK3-207ENST00000617054 TMEM256-PLSCR3K7ERE1 68 aa4.91□□□□□ -1.62
NEK3-207ENST00000617054 ERC2-IT1O76042 136 aa4.91□□□□□ -1.62
NEK3-207ENST00000617054 SNCGO76070 127 aa4.91□□□□□ -1.62
NEK3-207ENST00000617054 PRLHP81277 87 aa4.91□□□□□ -1.62
NEK3-207ENST00000617054 ST20-AS1Q8NBB2 130 aa4.91□□□□□ -1.62
NEK3-207ENST00000617054 ETDCA0A1B0GVM5 59 aa4.91□□□□□ -1.62
NEK3-207ENST00000617054 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.62
NEK3-207ENST00000617054 PKHD1P08F94 4074 aa4.9□□□□□ -1.62
NEK3-207ENST00000617054 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.62
NEK3-207ENST00000617054 RTL8CO15255 209 aa4.9□□□□□ -1.62
NEK3-207ENST00000617054 UBE2BP63146 152 aa4.9□□□□□ -1.62
NEK3-207ENST00000617054 IGLV5-37A0A075B6J1 123 aa4.9□□□□□ -1.63
NEK3-207ENST00000617054 A0A1B0GX51 115 aa4.9□□□□□ -1.63
NEK3-207ENST00000617054 REG3GQ6UW15 175 aa4.9□□□□□ -1.63
NEK3-207ENST00000617054 PKD1P98161 4303 aa4.9□□□□□ -1.63
NEK3-207ENST00000617054 KMT2CQ8NEZ4 4911 aaKnown RBP4.9□□□□□ -1.63
NEK3-207ENST00000617054 HAMPP81172 84 aa4.89□□□□□ -1.63
NEK3-207ENST00000617054 Q6ZRX8 168 aa4.89□□□□□ -1.63
NEK3-207ENST00000617054 SMCR5Q8TEV8 140 aa4.89□□□□□ -1.63
NEK3-207ENST00000617054 SCGB1A1P11684 91 aa4.89□□□□□ -1.63
NEK3-207ENST00000617054 FAM19A1Q7Z5A9 133 aa4.89□□□□□ -1.63
NEK3-207ENST00000617054 KRTAP10-2P60368 255 aa4.88□□□□□ -1.63
NEK3-207ENST00000617054 PRR26Q8N8Z3 221 aa4.88□□□□□ -1.63
NEK3-207ENST00000617054 OBSCN-AS1Q96MR7 158 aa4.88□□□□□ -1.63
NEK3-207ENST00000617054 IGLV5-52A0A0A0MRZ9 124 aa4.88□□□□□ -1.63
NEK3-207ENST00000617054 HIGD2AQ9BW72 106 aa4.88□□□□□ -1.63
NEK3-207ENST00000617054 TRBV7-6A0A0J9YX20 115 aa4.87□□□□□ -1.63
NEK3-207ENST00000617054 INAFM2P0DMQ5 153 aa4.87□□□□□ -1.63
NEK3-207ENST00000617054 SPRR1AP35321 89 aa4.87□□□□□ -1.63
NEK3-207ENST00000617054 RBM3P98179 157 aaKnown RBP4.87□□□□□ -1.63
NEK3-207ENST00000617054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.87□□□□□ -1.63
NEK3-207ENST00000617054 Q8N377 158 aa4.87□□□□□ -1.63
NEK3-207ENST00000617054 LINC00846Q9NV44 126 aa4.87□□□□□ -1.63
NEK3-207ENST00000617054 ALMS1Q8TCU4 4167 aa4.87□□□□□ -1.63
NEK3-207ENST00000617054 A0A0G2JQZ4 141 aa4.86□□□□□ -1.63
NEK3-207ENST00000617054 SPACA4Q8TDM5 124 aa4.86□□□□□ -1.63
NEK3-207ENST00000617054 NDUFV3P56181 108 aaKnown RBP4.85□□□□□ -1.63
NEK3-207ENST00000617054 JMJD7-PLA2G4BH0Y9G9 81 aa4.85□□□□□ -1.63
NEK3-207ENST00000617054 LINC01547P58512 204 aaPredicted RBP4.85□□□□□ -1.63
NEK3-207ENST00000617054 C3orf84H3BNL1 204 aa4.85□□□□□ -1.63
NEK3-207ENST00000617054 CCKP06307 115 aa4.84□□□□□ -1.63
NEK3-207ENST00000617054 EPM2AB3EWF7 344 aa4.84□□□□□ -1.63
NEK3-207ENST00000617054 DSCR8Q96T75 97 aa4.84□□□□□ -1.63
NEK3-207ENST00000617054 DHRS4-AS1Q9P1J3 65 aa4.84□□□□□ -1.64
NEK3-207ENST00000617054 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
NEK3-207ENST00000617054 Q6ZQT0 140 aa4.83□□□□□ -1.64
NEK3-207ENST00000617054 LINC00474Q9P2X8 69 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms