RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
CLTCL1-208ENST00000615606 FAM218AQ96MZ4 157 aa6.22□□□□□ -1.41
CLTCL1-208ENST00000615606 CXCL6P80162 114 aa6.22□□□□□ -1.41
CLTCL1-208ENST00000615606 KCNQ1DNQ9H478 68 aa6.22□□□□□ -1.41
CLTCL1-208ENST00000615606 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
CLTCL1-208ENST00000615606 HCG22E2RYF7 251 aa6.21□□□□□ -1.41
CLTCL1-208ENST00000615606 PSPHP1O15172 72 aa6.21□□□□□ -1.41
CLTCL1-208ENST00000615606 BAHCC1Q9P281 2608 aa6.21□□□□□ -1.41
CLTCL1-208ENST00000615606 H0Y9P7 68 aa6.21□□□□□ -1.41
CLTCL1-208ENST00000615606 LINC00476Q8WZB0 136 aa6.21□□□□□ -1.41
CLTCL1-208ENST00000615606 TEP1Q99973 2627 aaKnown RBP6.21□□□□□ -1.42
CLTCL1-208ENST00000615606 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.42
CLTCL1-208ENST00000615606 A0A0C4DFX4 3053 aa6.21□□□□□ -1.42
CLTCL1-208ENST00000615606 CNBPP62633 177 aaKnown RBP6.2□□□□□ -1.42
CLTCL1-208ENST00000615606 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
CLTCL1-208ENST00000615606 WDFY4Q6ZS81 3184 aa6.2□□□□□ -1.42
CLTCL1-208ENST00000615606 LAMA2P24043 3122 aaKnown RBP6.19□□□□□ -1.42
CLTCL1-208ENST00000615606 J3QL48 77 aa6.19□□□□□ -1.42
CLTCL1-208ENST00000615606 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
CLTCL1-208ENST00000615606 C9orf129Q5T035 196 aaKnown RBP6.18□□□□□ -1.42
CLTCL1-208ENST00000615606 PRO0628Q9UI54 55 aa6.18□□□□□ -1.42
CLTCL1-208ENST00000615606 LOC110117498A0A087WWA1 95 aa6.17□□□□□ -1.42
CLTCL1-208ENST00000615606 CASC10Q5T4H9 136 aa6.17□□□□□ -1.42
CLTCL1-208ENST00000615606 ZNF861PO60384 105 aa6.17□□□□□ -1.42
CLTCL1-208ENST00000615606 RPS28P62857 69 aaKnown RBP6.16□□□□□ -1.42
CLTCL1-208ENST00000615606 hDV103S1A0JD37 113 aa6.16□□□□□ -1.42
CLTCL1-208ENST00000615606 SMIM29Q86T20 159 aa6.16□□□□□ -1.42
CLTCL1-208ENST00000615606 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
CLTCL1-208ENST00000615606 UNC80Q8N2C7 3258 aa6.15□□□□□ -1.42
CLTCL1-208ENST00000615606 Q6ZQT0 140 aa6.15□□□□□ -1.42
CLTCL1-208ENST00000615606 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.43
CLTCL1-208ENST00000615606 TRIOO75962 3097 aa6.14□□□□□ -1.43
CLTCL1-208ENST00000615606 CHD6Q8TD26 2715 aa6.14□□□□□ -1.43
CLTCL1-208ENST00000615606 SPINK1P00995 79 aa6.14□□□□□ -1.43
CLTCL1-208ENST00000615606 TRBV7-4A0A0J9YYF1 115 aa6.13□□□□□ -1.43
CLTCL1-208ENST00000615606 CDH23Q9H251 3354 aa6.13□□□□□ -1.43
CLTCL1-208ENST00000615606 SSBP3-AS1Q7Z2R9 100 aa6.13□□□□□ -1.43
CLTCL1-208ENST00000615606 TP53AIP1Q9HCN2 124 aa6.12□□□□□ -1.43
CLTCL1-208ENST00000615606 COL6A5A8TX70 2615 aa6.12□□□□□ -1.43
CLTCL1-208ENST00000615606 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
CLTCL1-208ENST00000615606 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
CLTCL1-208ENST00000615606 STAB1Q9NY15 2570 aa6.11□□□□□ -1.43
CLTCL1-208ENST00000615606 TNP2Q05952 138 aa6.11□□□□□ -1.43
CLTCL1-208ENST00000615606 SPAG11AQ6PDA7 123 aa6.11□□□□□ -1.43
CLTCL1-208ENST00000615606 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
CLTCL1-208ENST00000615606 IGLV7-43P04211 117 aa6.11□□□□□ -1.43
CLTCL1-208ENST00000615606 C4orf26Q17RF5 130 aa6.1□□□□□ -1.43
CLTCL1-208ENST00000615606 TEX15Q9BXT5 2789 aa6.1□□□□□ -1.43
CLTCL1-208ENST00000615606 LINC00313P59037 77 aa6.1□□□□□ -1.43
CLTCL1-208ENST00000615606 TNRC18O15417 2968 aaPredicted RBP6.1□□□□□ -1.43
CLTCL1-208ENST00000615606 SETXQ7Z333 2677 aaKnown RBP6.1□□□□□ -1.43
CLTCL1-208ENST00000615606 PSORS1C2Q9UIG4 136 aa6.1□□□□□ -1.43
CLTCL1-208ENST00000615606 IGKV2D-30A0A075B6S6 120 aa6.09□□□□□ -1.43
CLTCL1-208ENST00000615606 IGKV2-30P06310 120 aa6.09□□□□□ -1.43
CLTCL1-208ENST00000615606 LINC00304Q8N9R0 145 aa6.09□□□□□ -1.43
CLTCL1-208ENST00000615606 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
CLTCL1-208ENST00000615606 C8orf87E5RJ46 101 aa6.08□□□□□ -1.44
CLTCL1-208ENST00000615606 CFAP54Q96N23 3096 aa6.07□□□□□ -1.44
CLTCL1-208ENST00000615606 XIRP2A4UGR9 3374 aa6.07□□□□□ -1.44
CLTCL1-208ENST00000615606 IGFL1Q6UW32 110 aa6.06□□□□□ -1.44
CLTCL1-208ENST00000615606 Q8N377 158 aa6.05□□□□□ -1.44
CLTCL1-208ENST00000615606 SZT2Q5T011 3432 aa6.05□□□□□ -1.44
CLTCL1-208ENST00000615606 Q96NJ1 140 aa6.04□□□□□ -1.44
CLTCL1-208ENST00000615606 SPRR4Q96PI1 79 aa6.04□□□□□ -1.44
CLTCL1-208ENST00000615606 A8MWP4 228 aa6.04□□□□□ -1.44
CLTCL1-208ENST00000615606 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
CLTCL1-208ENST00000615606 GCN1Q92616 2671 aaKnown RBP6.03□□□□□ -1.44
CLTCL1-208ENST00000615606 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
CLTCL1-208ENST00000615606 H3BPC8 53 aa6.02□□□□□ -1.45
CLTCL1-208ENST00000615606 TRAV22A0A0B4J277 110 aa6.02□□□□□ -1.45
CLTCL1-208ENST00000615606 KRTAP21-3Q3LHN1 58 aa6.02□□□□□ -1.45
CLTCL1-208ENST00000615606 ACYP2P14621 99 aa6.01□□□□□ -1.45
CLTCL1-208ENST00000615606 A0A1B0GU69 56 aa6.01□□□□□ -1.45
CLTCL1-208ENST00000615606 FAM104AQ969W3 186 aa6.01□□□□□ -1.45
CLTCL1-208ENST00000615606 VPS13AQ96RL7 3174 aa6.01□□□□□ -1.45
CLTCL1-208ENST00000615606 FLNCQ14315 2725 aa6□□□□□ -1.45
CLTCL1-208ENST00000615606 ERC2-IT1O76042 136 aa6□□□□□ -1.45
CLTCL1-208ENST00000615606 ANAPC11Q9NYG5 84 aa6□□□□□ -1.45
CLTCL1-208ENST00000615606 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.99□□□□□ -1.45
CLTCL1-208ENST00000615606 MRPL34Q9BQ48 92 aaKnown RBP5.99□□□□□ -1.45
CLTCL1-208ENST00000615606 LCE6AA0A183 80 aa5.98□□□□□ -1.45
CLTCL1-208ENST00000615606 NOTCH1P46531 2555 aa5.97□□□□□ -1.45
CLTCL1-208ENST00000615606 K7EQZ3 153 aa5.97□□□□□ -1.45
CLTCL1-208ENST00000615606 PLAC8Q9NZF1 115 aa5.96□□□□□ -1.45
CLTCL1-208ENST00000615606 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
CLTCL1-208ENST00000615606 A0A1B0GVX0 72 aa5.96□□□□□ -1.46
CLTCL1-208ENST00000615606 PRR15Q8IV56 129 aa5.95□□□□□ -1.46
CLTCL1-208ENST00000615606 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
CLTCL1-208ENST00000615606 DSCR10P59022 87 aa5.95□□□□□ -1.46
CLTCL1-208ENST00000615606 MAP1AP78559 2803 aaPredicted RBP5.95□□□□□ -1.46
CLTCL1-208ENST00000615606 KRTAP1-5Q9BYS1 174 aa5.94□□□□□ -1.46
CLTCL1-208ENST00000615606 COL6A3P12111 3177 aa5.93□□□□□ -1.46
CLTCL1-208ENST00000615606 A0A0G2JQZ4 141 aa5.93□□□□□ -1.46
CLTCL1-208ENST00000615606 UBR5O95071 2799 aaPredicted RBP5.93□□□□□ -1.46
CLTCL1-208ENST00000615606 OBSCN-AS1Q96MR7 158 aa5.93□□□□□ -1.46
CLTCL1-208ENST00000615606 ITPR2Q14571 2701 aa5.92□□□□□ -1.46
CLTCL1-208ENST00000615606 IGLV5-48A0A075B6I7 105 aa5.91□□□□□ -1.46
CLTCL1-208ENST00000615606 FAM229BQ4G0N7 80 aa5.91□□□□□ -1.46
CLTCL1-208ENST00000615606 FRYLO94915 3013 aa5.91□□□□□ -1.46
CLTCL1-208ENST00000615606 C9orf92A6NGG3 77 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms