RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 TRAV10A0A0B4J240 114 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 SDHAF1A6NFY7 115 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 CEBPZOSA8MTT3 80 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 CHKB-CPT1BH3BT56 60 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 H3BVH4 76 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 ERC2-IT1O76042 136 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 CTSGP08311 255 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 TOMM5Q8N4H5 51 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 IFI27L1Q96BM0 104 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 LIMD2Q9BT23 127 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 PSENENQ9NZ42 101 aa1.57□□□□□ -2.16
TARDBP-212ENST00000611008 USF3Q68DE3 2245 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 LYSTQ99698 3801 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 IGLV3-32A0A0A0MS00 114 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 TRAV12-3A0A0B4J271 114 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 CXorf51AA0A1B0GTR3 108 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 TMEM30CPA0ZSE6 113 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 C2orf70A6NJV1 201 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 ZNF815PA8K554 130 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 HCRTO43612 131 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 COX6CP09669 75 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 BAALC-AS2P0C853 105 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 SPINT3P49223 89 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 PLGLAQ15195 96 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 SPANXN5Q5MJ07 72 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 Q6JHZ5 121 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 TMEM254Q8TBM7 123 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 ANKRD36A6QL64 1941 aa1.56□□□□□ -2.16
TARDBP-212ENST00000611008 HEATR5BQ9P2D3 2071 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 HEATR1Q9H583 2144 aaKnown RBP1.55□□□□□ -2.16
TARDBP-212ENST00000611008 TRBV6-7A0A0A0MS04 114 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 TMEM14DPA8MWL7 114 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 C10orf142B7Z368 130 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 COX6B1P14854 86 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 LYPD6Q86Y78 171 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 Q8NAQ8 132 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 TMEM14BQ9NUH8 114 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 HECTD4Q9Y4D8 3996 aa1.55□□□□□ -2.16
TARDBP-212ENST00000611008 MDC1Q14676 2089 aaKnown RBP1.54□□□□□ -2.16
TARDBP-212ENST00000611008 IGHV3-64A0A075B6Q5 118 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 TRAV23DV6A0A075B6W5 121 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 ODF3BA8MYP8 253 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 LEPROTL1O95214 131 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 IFI27P40305 119 aaPredicted RBP1.54□□□□□ -2.16
TARDBP-212ENST00000611008 UBE2D1P51668 147 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 CSAG1Q6PB30 78 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.54□□□□□ -2.16
TARDBP-212ENST00000611008 NDUFA11Q86Y39 141 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 CLECL1Q8IZS7 167 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 ZCCHC13Q8WW36 166 aaKnown RBP1.54□□□□□ -2.16
TARDBP-212ENST00000611008 CDC42SE2Q9NRR3 84 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 C22orf24Q9Y442 160 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 FRAS1Q86XX4 4008 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 NCOA6Q14686 2063 aaPredicted RBP1.54□□□□□ -2.16
TARDBP-212ENST00000611008 FREM3P0C091 2139 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 SPTBP11277 2137 aa1.54□□□□□ -2.16
TARDBP-212ENST00000611008 TRBV6-8A0A0A6YYG3 113 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 A0A0J9YX75 114 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 A0A1B0GU33 70 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 ARMS2P0C7Q2 107 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 S100A3P33764 101 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 ATXN8Q156A1 80 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 NCBP2-AS2Q69YL0 99 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 SMR3AQ99954 134 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 NDUFA4L2Q9NRX3 87 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 UBE2D4Q9Y2X8 147 aa1.53□□□□□ -2.16
TARDBP-212ENST00000611008 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
TARDBP-212ENST00000611008 DNAH7Q8WXX0 4024 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 TRAV12-1A0A0B4J245 112 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 TRBV10-1A0A0K0K1A3 114 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 LOC101927531A0A1B0GV80 90 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 A0A1W2PNM2 257 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 LINC01549A6NIU2 74 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 IGHV3-33P01772 117 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 PRH1P02810 166 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 ERHP84090 104 aaKnown RBP1.52□□□□□ -2.17
TARDBP-212ENST00000611008 GDF5OSQ5U4N7 250 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 C2orf82Q6UX34 121 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 ZNF833PQ6ZTB9 187 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 PPP1R1CQ8WVI7 109 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 PLCE1Q9P212 2302 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 ARHGAP32A7KAX9 2087 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 MUC2Q02817 5179 aa1.52□□□□□ -2.17
TARDBP-212ENST00000611008 DNAH9Q9NYC9 4486 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 FREM1Q5H8C1 2179 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 HRNRQ86YZ3 2850 aaPredicted RBP1.51□□□□□ -2.17
TARDBP-212ENST00000611008 CLPSL1A2RUU4 121 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 D6R8Y8 96 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 HMGN4O00479 90 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 SSBP1Q04837 148 aaKnown RBP1.51□□□□□ -2.17
TARDBP-212ENST00000611008 ATP5EP2Q5VTU8 51 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 KRTAP26-1Q6PEX3 210 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 MUSTN1Q8IVN3 82 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 DEFB119Q8N690 84 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 C9orf163Q8N9P6 203 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 PRR15LQ9BU68 103 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 SNURFQ9Y675 71 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 LHFPL6Q9Y693 200 aa1.51□□□□□ -2.17
TARDBP-212ENST00000611008 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms