RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
HDDC2-209ENST00000609477 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
HDDC2-209ENST00000609477 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
HDDC2-209ENST00000609477 TRAV23DV6A0A075B6W5 121 aa8.47□□□□□ -1.05
HDDC2-209ENST00000609477 PCP2Q8IVA1 136 aa8.47□□□□□ -1.05
HDDC2-209ENST00000609477 B5MCH6 92 aa8.46□□□□□ -1.06
HDDC2-209ENST00000609477 SCGB1D1O95968 90 aa8.46□□□□□ -1.06
HDDC2-209ENST00000609477 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.06
HDDC2-209ENST00000609477 A0A087X002 238 aa8.45□□□□□ -1.06
HDDC2-209ENST00000609477 HINT1P49773 126 aaPredicted RBP8.45□□□□□ -1.06
HDDC2-209ENST00000609477 Q6ZRX8 168 aa8.45□□□□□ -1.06
HDDC2-209ENST00000609477 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
HDDC2-209ENST00000609477 ZNF73O43830 326 aaPredicted RBP8.44□□□□□ -1.06
HDDC2-209ENST00000609477 CTAG1AP78358 180 aa8.43□□□□□ -1.06
HDDC2-209ENST00000609477 OR13C6PQ8NH95 151 aa8.43□□□□□ -1.06
HDDC2-209ENST00000609477 SMCR5Q8TEV8 140 aa8.43□□□□□ -1.06
HDDC2-209ENST00000609477 SPRR4Q96PI1 79 aa8.43□□□□□ -1.06
HDDC2-209ENST00000609477 MUSTN1Q8IVN3 82 aa8.41□□□□□ -1.06
HDDC2-209ENST00000609477 ANAPC11Q9NYG5 84 aa8.41□□□□□ -1.06
HDDC2-209ENST00000609477 HMCN2Q8NDA2 5059 aa8.41□□□□□ -1.06
HDDC2-209ENST00000609477 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
HDDC2-209ENST00000609477 Q9BRP9 147 aa8.39□□□□□ -1.07
HDDC2-209ENST00000609477 TRBV7-6A0A0J9YX20 115 aa8.38□□□□□ -1.07
HDDC2-209ENST00000609477 DLEU1O43261 78 aa8.38□□□□□ -1.07
HDDC2-209ENST00000609477 LINC00483Q53H64 154 aa8.38□□□□□ -1.07
HDDC2-209ENST00000609477 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
HDDC2-209ENST00000609477 COX8AP10176 69 aa8.37□□□□□ -1.07
HDDC2-209ENST00000609477 DHRS4-AS1Q9P1J3 65 aa8.37□□□□□ -1.07
HDDC2-209ENST00000609477 ERC2-IT1O76042 136 aa8.35□□□□□ -1.07
HDDC2-209ENST00000609477 ELOF1P60002 83 aaKnown RBP8.35□□□□□ -1.07
HDDC2-209ENST00000609477 LINC00304Q8N9R0 145 aa8.35□□□□□ -1.07
HDDC2-209ENST00000609477 A6NDN8 102 aa8.34□□□□□ -1.07
HDDC2-209ENST00000609477 C6orf99Q4VX62 202 aa8.34□□□□□ -1.07
HDDC2-209ENST00000609477 SPAG11AQ6PDA7 123 aa8.34□□□□□ -1.07
HDDC2-209ENST00000609477 VAMP8Q9BV40 100 aa8.34□□□□□ -1.07
HDDC2-209ENST00000609477 A4D1N5 150 aa8.33□□□□□ -1.08
HDDC2-209ENST00000609477 COX7BP24311 80 aa8.33□□□□□ -1.08
HDDC2-209ENST00000609477 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
HDDC2-209ENST00000609477 A0A1B0GWB2 263 aa8.32□□□□□ -1.08
HDDC2-209ENST00000609477 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
HDDC2-209ENST00000609477 SPATA45Q537H7 98 aa8.31□□□□□ -1.08
HDDC2-209ENST00000609477 HIST1H4GQ99525 98 aa8.31□□□□□ -1.08
HDDC2-209ENST00000609477 HIGD1BQ9P298 99 aa8.31□□□□□ -1.08
HDDC2-209ENST00000609477 PAM16Q9Y3D7 125 aa8.31□□□□□ -1.08
HDDC2-209ENST00000609477 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
HDDC2-209ENST00000609477 SSBP3-AS1Q7Z2R9 100 aa8.3□□□□□ -1.08
HDDC2-209ENST00000609477 TSPAN13O95857 204 aa8.29□□□□□ -1.08
HDDC2-209ENST00000609477 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
HDDC2-209ENST00000609477 C14orf144Q96I85 54 aa8.29□□□□□ -1.08
HDDC2-209ENST00000609477 SPRR1BP22528 89 aa8.28□□□□□ -1.08
HDDC2-209ENST00000609477 NHP2Q9NX24 153 aaKnown RBP8.28□□□□□ -1.08
HDDC2-209ENST00000609477 VAMP3Q15836 100 aa8.27□□□□□ -1.09
HDDC2-209ENST00000609477 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.09
HDDC2-209ENST00000609477 SPINK1P00995 79 aa8.26□□□□□ -1.09
HDDC2-209ENST00000609477 PRR4Q16378 134 aa8.25□□□□□ -1.09
HDDC2-209ENST00000609477 TAL2Q16559 108 aa8.25□□□□□ -1.09
HDDC2-209ENST00000609477 PYY3Q5JQD4 70 aa8.25□□□□□ -1.09
HDDC2-209ENST00000609477 ST20-AS1Q8NBB2 130 aa8.25□□□□□ -1.09
HDDC2-209ENST00000609477 Q8NBF4 154 aa8.25□□□□□ -1.09
HDDC2-209ENST00000609477 IGLV9-49A0A0B4J1Y8 123 aa8.24□□□□□ -1.09
HDDC2-209ENST00000609477 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
HDDC2-209ENST00000609477 TMA7Q9Y2S6 64 aaKnown RBP8.24□□□□□ -1.09
HDDC2-209ENST00000609477 TEX49A0A1B0GTD5 131 aa8.23□□□□□ -1.09
HDDC2-209ENST00000609477 SLC25A20O43772 301 aa8.23□□□□□ -1.09
HDDC2-209ENST00000609477 MOBPQ13875 183 aa8.23□□□□□ -1.09
HDDC2-209ENST00000609477 LAMTOR3Q9UHA4 124 aa8.23□□□□□ -1.09
HDDC2-209ENST00000609477 C2orf91Q6ZV80 131 aa8.22□□□□□ -1.09
HDDC2-209ENST00000609477 IGLV5-48A0A075B6I7 105 aa8.21□□□□□ -1.1
HDDC2-209ENST00000609477 BVES-AS1Q5T3Y7 98 aa8.21□□□□□ -1.1
HDDC2-209ENST00000609477 TMEM238LA0A1B0GVL6 79 aa8.2□□□□□ -1.1
HDDC2-209ENST00000609477 A6NJY4 79 aa8.2□□□□□ -1.1
HDDC2-209ENST00000609477 C9orf153Q5TBE3 101 aa8.2□□□□□ -1.1
HDDC2-209ENST00000609477 LRP2P98164 4655 aa8.2□□□□□ -1.1
HDDC2-209ENST00000609477 A0A0B4J2C4 111 aa8.19□□□□□ -1.1
HDDC2-209ENST00000609477 CFC1BP0CG36 223 aa8.19□□□□□ -1.1
HDDC2-209ENST00000609477 CFC1P0CG37 223 aa8.19□□□□□ -1.1
HDDC2-209ENST00000609477 LINC00575Q6W349 94 aa8.19□□□□□ -1.1
HDDC2-209ENST00000609477 CEND1Q8N111 149 aa8.19□□□□□ -1.1
HDDC2-209ENST00000609477 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
HDDC2-209ENST00000609477 C12orf57Q99622 126 aa8.18□□□□□ -1.1
HDDC2-209ENST00000609477 FP248Q71RG6 208 aaPredicted RBP8.17□□□□□ -1.1
HDDC2-209ENST00000609477 DEFB105AQ8NG35 78 aa8.17□□□□□ -1.1
HDDC2-209ENST00000609477 hADV29S1A0JD25 119 aa8.16□□□□□ -1.1
HDDC2-209ENST00000609477 LINC01547P58512 204 aaPredicted RBP8.16□□□□□ -1.1
HDDC2-209ENST00000609477 UBR4Q5T4S7 5183 aa8.16□□□□□ -1.1
HDDC2-209ENST00000609477 H0YGX0 51 aa8.14□□□□□ -1.11
HDDC2-209ENST00000609477 SNCGO76070 127 aa8.14□□□□□ -1.11
HDDC2-209ENST00000609477 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
HDDC2-209ENST00000609477 RETNLBQ9BQ08 111 aa8.14□□□□□ -1.11
HDDC2-209ENST00000609477 PRO1933Q9H354 126 aa8.14□□□□□ -1.11
HDDC2-209ENST00000609477 UQCR10Q9UDW1 63 aa8.14□□□□□ -1.11
HDDC2-209ENST00000609477 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
HDDC2-209ENST00000609477 CD164Q04900 197 aa8.13□□□□□ -1.11
HDDC2-209ENST00000609477 HSD52Q0P140 79 aa8.13□□□□□ -1.11
HDDC2-209ENST00000609477 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
HDDC2-209ENST00000609477 Q1RN00 199 aa8.13□□□□□ -1.11
HDDC2-209ENST00000609477 Q8N377 158 aa8.13□□□□□ -1.11
HDDC2-209ENST00000609477 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
HDDC2-209ENST00000609477 PRO1854Q9UHT4 67 aa8.13□□□□□ -1.11
HDDC2-209ENST00000609477 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms