RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
MSH6-211ENST00000606499 TMEM126AQ9H061 195 aa4.73□□□□□ -1.65
MSH6-211ENST00000606499 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
MSH6-211ENST00000606499 TRAV23DV6A0A075B6W5 121 aa4.72□□□□□ -1.65
MSH6-211ENST00000606499 PRYO14603 147 aa4.72□□□□□ -1.65
MSH6-211ENST00000606499 PLA2G1BP04054 148 aaKnown RBP4.72□□□□□ -1.65
MSH6-211ENST00000606499 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
MSH6-211ENST00000606499 CFC1P0CG37 223 aa4.72□□□□□ -1.65
MSH6-211ENST00000606499 CTAG1AP78358 180 aa4.72□□□□□ -1.65
MSH6-211ENST00000606499 REG3GQ6UW15 175 aa4.72□□□□□ -1.65
MSH6-211ENST00000606499 TRAV13-2A0A0B4J235 113 aa4.71□□□□□ -1.66
MSH6-211ENST00000606499 TMEM238LA0A1B0GVL6 79 aa4.71□□□□□ -1.66
MSH6-211ENST00000606499 BCE1O60756 84 aa4.71□□□□□ -1.66
MSH6-211ENST00000606499 RPL13AP40429 203 aaKnown RBP4.71□□□□□ -1.66
MSH6-211ENST00000606499 HINT1P49773 126 aaPredicted RBP4.71□□□□□ -1.66
MSH6-211ENST00000606499 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.66
MSH6-211ENST00000606499 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
MSH6-211ENST00000606499 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.66
MSH6-211ENST00000606499 MYCBP2O75592 4640 aa4.7□□□□□ -1.66
MSH6-211ENST00000606499 A0A0B4J2C4 111 aa4.7□□□□□ -1.66
MSH6-211ENST00000606499 KRTAP4-16G5E9R7 235 aaPredicted RBP4.7□□□□□ -1.66
MSH6-211ENST00000606499 K7ERJ3 54 aa4.7□□□□□ -1.66
MSH6-211ENST00000606499 IGLV7-43P04211 117 aa4.7□□□□□ -1.66
MSH6-211ENST00000606499 SPRR1AP35321 89 aa4.7□□□□□ -1.66
MSH6-211ENST00000606499 PRLHP81277 87 aa4.7□□□□□ -1.66
MSH6-211ENST00000606499 BVES-AS1Q5T3Y7 98 aa4.7□□□□□ -1.66
MSH6-211ENST00000606499 RAB37Q96AX2 223 aa4.7□□□□□ -1.66
MSH6-211ENST00000606499 ETDCA0A1B0GVM5 59 aa4.69□□□□□ -1.66
MSH6-211ENST00000606499 H7C2G1 150 aa4.69□□□□□ -1.66
MSH6-211ENST00000606499 ZNF73O43830 326 aaPredicted RBP4.69□□□□□ -1.66
MSH6-211ENST00000606499 FAM19A1Q7Z5A9 133 aa4.69□□□□□ -1.66
MSH6-211ENST00000606499 KRTAP13-1Q8IUC0 172 aa4.69□□□□□ -1.66
MSH6-211ENST00000606499 SMIM11BQ8TCY0 68 aa4.69□□□□□ -1.66
MSH6-211ENST00000606499 A0A1B0GWB2 263 aa4.68□□□□□ -1.66
MSH6-211ENST00000606499 B5MCH6 92 aa4.68□□□□□ -1.66
MSH6-211ENST00000606499 M0R143 59 aa4.68□□□□□ -1.66
MSH6-211ENST00000606499 UBE2AP49459 152 aa4.68□□□□□ -1.66
MSH6-211ENST00000606499 C6orf99Q4VX62 202 aa4.68□□□□□ -1.66
MSH6-211ENST00000606499 DIRC1Q969H9 104 aa4.68□□□□□ -1.66
MSH6-211ENST00000606499 PRO1854Q9UHT4 67 aa4.68□□□□□ -1.66
MSH6-211ENST00000606499 PCP4L1A6NKN8 68 aa4.67□□□□□ -1.66
MSH6-211ENST00000606499 RPL28P46779 137 aaKnown RBP4.67□□□□□ -1.66
MSH6-211ENST00000606499 BATFQ16520 125 aa4.67□□□□□ -1.66
MSH6-211ENST00000606499 Q6ZRX8 168 aa4.67□□□□□ -1.66
MSH6-211ENST00000606499 CBY1Q9Y3M2 126 aa4.67□□□□□ -1.66
MSH6-211ENST00000606499 ZNF861PO60384 105 aa4.66□□□□□ -1.66
MSH6-211ENST00000606499 ELOF1P60002 83 aaKnown RBP4.66□□□□□ -1.66
MSH6-211ENST00000606499 Q1RN00 199 aa4.66□□□□□ -1.66
MSH6-211ENST00000606499 Q9BRP9 147 aa4.66□□□□□ -1.66
MSH6-211ENST00000606499 HIGD2AQ9BW72 106 aa4.66□□□□□ -1.66
MSH6-211ENST00000606499 H0Y9J4 135 aa4.65□□□□□ -1.67
MSH6-211ENST00000606499 TSPAN13O95857 204 aa4.65□□□□□ -1.67
MSH6-211ENST00000606499 COX7BP24311 80 aa4.65□□□□□ -1.67
MSH6-211ENST00000606499 SPINK6Q6UWN8 80 aa4.65□□□□□ -1.67
MSH6-211ENST00000606499 SMCR5Q8TEV8 140 aa4.65□□□□□ -1.67
MSH6-211ENST00000606499 LRP1Q07954 4544 aaKnown RBP4.65□□□□□ -1.67
MSH6-211ENST00000606499 FAT3Q8TDW7 4589 aa4.64□□□□□ -1.67
MSH6-211ENST00000606499 TRBV7-6A0A0J9YX20 115 aa4.64□□□□□ -1.67
MSH6-211ENST00000606499 TRIAP1O43715 76 aa4.64□□□□□ -1.67
MSH6-211ENST00000606499 ERC2-IT1O76042 136 aa4.64□□□□□ -1.67
MSH6-211ENST00000606499 INAFM2P0DMQ5 153 aa4.64□□□□□ -1.67
MSH6-211ENST00000606499 SNHG12Q9BXW3 62 aa4.63□□□□□ -1.67
MSH6-211ENST00000606499 PSMB2P49721 201 aa4.62□□□□□ -1.67
MSH6-211ENST00000606499 VAMP3Q15836 100 aa4.62□□□□□ -1.67
MSH6-211ENST00000606499 NAA38Q9BRA0 125 aaKnown RBP4.62□□□□□ -1.67
MSH6-211ENST00000606499 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
MSH6-211ENST00000606499 ST20-AS1Q8NBB2 130 aa4.61□□□□□ -1.67
MSH6-211ENST00000606499 DHRS4-AS1Q9P1J3 65 aa4.61□□□□□ -1.67
MSH6-211ENST00000606499 LINC00575Q6W349 94 aa4.6□□□□□ -1.67
MSH6-211ENST00000606499 CLEC2BQ92478 149 aa4.6□□□□□ -1.67
MSH6-211ENST00000606499 FAM218AQ96MZ4 157 aa4.6□□□□□ -1.67
MSH6-211ENST00000606499 SPRR4Q96PI1 79 aa4.6□□□□□ -1.67
MSH6-211ENST00000606499 ANAPC11Q9NYG5 84 aa4.6□□□□□ -1.67
MSH6-211ENST00000606499 TAX1BP3O14907 124 aa4.59□□□□□ -1.67
MSH6-211ENST00000606499 ZNF706Q9Y5V0 76 aaPredicted RBP4.59□□□□□ -1.67
MSH6-211ENST00000606499 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
MSH6-211ENST00000606499 A0A087X002 238 aa4.58□□□□□ -1.68
MSH6-211ENST00000606499 hADV29S1A0JD25 119 aa4.58□□□□□ -1.68
MSH6-211ENST00000606499 H0YGX0 51 aa4.58□□□□□ -1.68
MSH6-211ENST00000606499 SLC25A20O43772 301 aa4.58□□□□□ -1.68
MSH6-211ENST00000606499 Q6ZQY7 126 aa4.58□□□□□ -1.68
MSH6-211ENST00000606499 H3BUT2 72 aa4.57□□□□□ -1.68
MSH6-211ENST00000606499 COX6CP09669 75 aa4.57□□□□□ -1.68
MSH6-211ENST00000606499 COL5A1-AS1Q5SY13 56 aa4.57□□□□□ -1.68
MSH6-211ENST00000606499 GAGE2AQ6NT46 116 aa4.57□□□□□ -1.68
MSH6-211ENST00000606499 PRR26Q8N8Z3 221 aa4.57□□□□□ -1.68
MSH6-211ENST00000606499 DEFB105AQ8NG35 78 aa4.57□□□□□ -1.68
MSH6-211ENST00000606499 C9orf118A6NHY6 69 aa4.56□□□□□ -1.68
MSH6-211ENST00000606499 SCGB1C2P0DMR2 95 aa4.56□□□□□ -1.68
MSH6-211ENST00000606499 LINC01547P58512 204 aaPredicted RBP4.56□□□□□ -1.68
MSH6-211ENST00000606499 LINC00483Q53H64 154 aa4.56□□□□□ -1.68
MSH6-211ENST00000606499 LINC01600Q96MT4 127 aa4.56□□□□□ -1.68
MSH6-211ENST00000606499 TNXBP22105 4242 aa4.56□□□□□ -1.68
MSH6-211ENST00000606499 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
MSH6-211ENST00000606499 FAM229BQ4G0N7 80 aa4.55□□□□□ -1.68
MSH6-211ENST00000606499 KRTAP13-2Q52LG2 175 aa4.55□□□□□ -1.68
MSH6-211ENST00000606499 C3orf22Q8N5N4 141 aa4.55□□□□□ -1.68
MSH6-211ENST00000606499 A0A1B0GX51 115 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 A0A1W2PPM0 123 aa4.54□□□□□ -1.68
MSH6-211ENST00000606499 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms