RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
RNF40-212ENST00000602784 HIGD1BQ9P298 99 aa8.37□□□□□ -1.07
RNF40-212ENST00000602784 LRP1Q07954 4544 aaKnown RBP8.36□□□□□ -1.07
RNF40-212ENST00000602784 PRLHP81277 87 aa8.36□□□□□ -1.07
RNF40-212ENST00000602784 TRAV23DV6A0A075B6W5 121 aa8.35□□□□□ -1.07
RNF40-212ENST00000602784 ETDCA0A1B0GVM5 59 aa8.35□□□□□ -1.07
RNF40-212ENST00000602784 OR13C6PQ8NH95 151 aa8.35□□□□□ -1.07
RNF40-212ENST00000602784 ZNF73O43830 326 aaPredicted RBP8.34□□□□□ -1.07
RNF40-212ENST00000602784 KRTAP1-4P0C5Y4 121 aa8.34□□□□□ -1.07
RNF40-212ENST00000602784 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
RNF40-212ENST00000602784 HIST1H4GQ99525 98 aa8.34□□□□□ -1.07
RNF40-212ENST00000602784 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.08
RNF40-212ENST00000602784 B5MCH6 92 aa8.33□□□□□ -1.08
RNF40-212ENST00000602784 TRAV13-2A0A0B4J235 113 aa8.32□□□□□ -1.08
RNF40-212ENST00000602784 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
RNF40-212ENST00000602784 A4D1N5 150 aa8.31□□□□□ -1.08
RNF40-212ENST00000602784 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
RNF40-212ENST00000602784 Q6ZRX8 168 aa8.31□□□□□ -1.08
RNF40-212ENST00000602784 C2orf91Q6ZV80 131 aa8.31□□□□□ -1.08
RNF40-212ENST00000602784 A6NDN8 102 aa8.3□□□□□ -1.08
RNF40-212ENST00000602784 TAL2Q16559 108 aa8.3□□□□□ -1.08
RNF40-212ENST00000602784 HIGD2AQ9BW72 106 aa8.3□□□□□ -1.08
RNF40-212ENST00000602784 TRBV7-6A0A0J9YX20 115 aa8.28□□□□□ -1.08
RNF40-212ENST00000602784 RPL13AP40429 203 aaKnown RBP8.28□□□□□ -1.08
RNF40-212ENST00000602784 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
RNF40-212ENST00000602784 FAM229BQ4G0N7 80 aa8.27□□□□□ -1.09
RNF40-212ENST00000602784 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.09
RNF40-212ENST00000602784 Q9BRP9 147 aa8.27□□□□□ -1.09
RNF40-212ENST00000602784 ZNF706Q9Y5V0 76 aaPredicted RBP8.27□□□□□ -1.09
RNF40-212ENST00000602784 SMIM6P0DI80 62 aa8.26□□□□□ -1.09
RNF40-212ENST00000602784 C6orf99Q4VX62 202 aa8.26□□□□□ -1.09
RNF40-212ENST00000602784 UQCR10Q9UDW1 63 aa8.26□□□□□ -1.09
RNF40-212ENST00000602784 CRYGAP11844 174 aa8.25□□□□□ -1.09
RNF40-212ENST00000602784 ELOF1P60002 83 aaKnown RBP8.25□□□□□ -1.09
RNF40-212ENST00000602784 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
RNF40-212ENST00000602784 COX7BP24311 80 aa8.24□□□□□ -1.09
RNF40-212ENST00000602784 CEND1Q8N111 149 aa8.24□□□□□ -1.09
RNF40-212ENST00000602784 SMIM11BQ8TCY0 68 aa8.24□□□□□ -1.09
RNF40-212ENST00000602784 DHRS4-AS1Q9P1J3 65 aa8.24□□□□□ -1.09
RNF40-212ENST00000602784 LOC105371267A0A1B0GV96 52 aa8.23□□□□□ -1.09
RNF40-212ENST00000602784 A0A1B0GWB2 263 aa8.23□□□□□ -1.09
RNF40-212ENST00000602784 ERC2-IT1O76042 136 aa8.23□□□□□ -1.09
RNF40-212ENST00000602784 TNXBP22105 4242 aa8.23□□□□□ -1.09
RNF40-212ENST00000602784 A0A087X002 238 aa8.22□□□□□ -1.09
RNF40-212ENST00000602784 TMEM238LA0A1B0GVL6 79 aa8.22□□□□□ -1.09
RNF40-212ENST00000602784 A6NJY4 79 aa8.22□□□□□ -1.09
RNF40-212ENST00000602784 CFC1BP0CG36 223 aa8.22□□□□□ -1.09
RNF40-212ENST00000602784 CFC1P0CG37 223 aa8.22□□□□□ -1.09
RNF40-212ENST00000602784 HSD52Q0P140 79 aa8.22□□□□□ -1.09
RNF40-212ENST00000602784 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
RNF40-212ENST00000602784 A0A0B4J2C4 111 aa8.21□□□□□ -1.1
RNF40-212ENST00000602784 LINC00483Q53H64 154 aa8.21□□□□□ -1.1
RNF40-212ENST00000602784 C12orf57Q99622 126 aa8.21□□□□□ -1.1
RNF40-212ENST00000602784 HERC1Q15751 4861 aa8.2□□□□□ -1.1
RNF40-212ENST00000602784 VAMP3Q15836 100 aa8.2□□□□□ -1.1
RNF40-212ENST00000602784 KRTAP13-2Q52LG2 175 aa8.19□□□□□ -1.1
RNF40-212ENST00000602784 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
RNF40-212ENST00000602784 FXYD2P54710 66 aa8.18□□□□□ -1.1
RNF40-212ENST00000602784 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
RNF40-212ENST00000602784 TYMSOSQ8TAI1 123 aa8.18□□□□□ -1.1
RNF40-212ENST00000602784 GAGE2AQ6NT46 116 aa8.17□□□□□ -1.1
RNF40-212ENST00000602784 NHP2Q9NX24 153 aaKnown RBP8.17□□□□□ -1.1
RNF40-212ENST00000602784 PRO1854Q9UHT4 67 aa8.16□□□□□ -1.1
RNF40-212ENST00000602784 BVES-AS1Q5T3Y7 98 aa8.15□□□□□ -1.1
RNF40-212ENST00000602784 ST20-AS1Q8NBB2 130 aa8.15□□□□□ -1.1
RNF40-212ENST00000602784 PRO1933Q9H354 126 aa8.15□□□□□ -1.1
RNF40-212ENST00000602784 SPRR1BP22528 89 aa8.14□□□□□ -1.11
RNF40-212ENST00000602784 LINC00575Q6W349 94 aa8.14□□□□□ -1.11
RNF40-212ENST00000602784 H7C2G1 150 aa8.13□□□□□ -1.11
RNF40-212ENST00000602784 SLC25A20O43772 301 aa8.13□□□□□ -1.11
RNF40-212ENST00000602784 C3orf22Q8N5N4 141 aa8.13□□□□□ -1.11
RNF40-212ENST00000602784 CTAG1AP78358 180 aa8.11□□□□□ -1.11
RNF40-212ENST00000602784 IGLV5-48A0A075B6I7 105 aa8.1□□□□□ -1.11
RNF40-212ENST00000602784 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
RNF40-212ENST00000602784 hADV29S1A0JD25 119 aa8.1□□□□□ -1.11
RNF40-212ENST00000602784 TSTD3H0UI37 97 aa8.1□□□□□ -1.11
RNF40-212ENST00000602784 H0YGX0 51 aa8.1□□□□□ -1.11
RNF40-212ENST00000602784 SSBP3-AS1Q7Z2R9 100 aa8.1□□□□□ -1.11
RNF40-212ENST00000602784 Q1RN00 199 aa8.09□□□□□ -1.11
RNF40-212ENST00000602784 LINC00304Q8N9R0 145 aa8.09□□□□□ -1.11
RNF40-212ENST00000602784 SPAG11AQ6PDA7 123 aa8.08□□□□□ -1.12
RNF40-212ENST00000602784 IGLV9-49A0A0B4J1Y8 123 aa8.07□□□□□ -1.12
RNF40-212ENST00000602784 M0R143 59 aa8.07□□□□□ -1.12
RNF40-212ENST00000602784 SNCGO76070 127 aa8.07□□□□□ -1.12
RNF40-212ENST00000602784 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
RNF40-212ENST00000602784 DEFB105AQ8NG35 78 aa8.07□□□□□ -1.12
RNF40-212ENST00000602784 LAMTOR3Q9UHA4 124 aa8.07□□□□□ -1.12
RNF40-212ENST00000602784 K7ERJ3 54 aa8.06□□□□□ -1.12
RNF40-212ENST00000602784 MOBPQ13875 183 aa8.06□□□□□ -1.12
RNF40-212ENST00000602784 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.06□□□□□ -1.12
RNF40-212ENST00000602784 Q8NBF4 154 aa8.05□□□□□ -1.12
RNF40-212ENST00000602784 A0A1B0GX51 115 aa8.04□□□□□ -1.12
RNF40-212ENST00000602784 TRIAP1O43715 76 aa8.04□□□□□ -1.12
RNF40-212ENST00000602784 C4orf48Q5BLP8 95 aa8.04□□□□□ -1.12
RNF40-212ENST00000602784 Q6ZQY7 126 aa8.04□□□□□ -1.12
RNF40-212ENST00000602784 SMIM29Q86T20 159 aa8.04□□□□□ -1.12
RNF40-212ENST00000602784 Q8N377 158 aa8.04□□□□□ -1.12
RNF40-212ENST00000602784 TSPAN13O95857 204 aa8.03□□□□□ -1.12
RNF40-212ENST00000602784 PPDPFLQ8WWR9 84 aa8.03□□□□□ -1.12
RNF40-212ENST00000602784 SPINK1P00995 79 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms