RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TRBV7-6A0A0J9YX20 115 aa11.6□□□□□ -0.55
SSBP4-212ENST00000601919 TRIAP1O43715 76 aa11.6□□□□□ -0.55
SSBP4-212ENST00000601919 SCGB1C2P0DMR2 95 aa11.6□□□□□ -0.55
SSBP4-212ENST00000601919 ETDCA0A1B0GVM5 59 aa11.58□□□□□ -0.56
SSBP4-212ENST00000601919 H0YGX0 51 aa11.58□□□□□ -0.56
SSBP4-212ENST00000601919 SPRR1AP35321 89 aa11.58□□□□□ -0.56
SSBP4-212ENST00000601919 NAA38Q9BRA0 125 aaKnown RBP11.58□□□□□ -0.56
SSBP4-212ENST00000601919 A0A1W2PPM0 123 aa11.56□□□□□ -0.56
SSBP4-212ENST00000601919 FABP2P12104 132 aa11.56□□□□□ -0.56
SSBP4-212ENST00000601919 COX7BP24311 80 aa11.56□□□□□ -0.56
SSBP4-212ENST00000601919 HAMPP81172 84 aa11.55□□□□□ -0.56
SSBP4-212ENST00000601919 SNCGO76070 127 aa11.54□□□□□ -0.56
SSBP4-212ENST00000601919 XGP55808 180 aa11.54□□□□□ -0.56
SSBP4-212ENST00000601919 DNAH8Q96JB1 4490 aa11.54□□□□□ -0.56
SSBP4-212ENST00000601919 BCE1O60756 84 aa11.53□□□□□ -0.56
SSBP4-212ENST00000601919 ELOF1P60002 83 aaKnown RBP11.53□□□□□ -0.56
SSBP4-212ENST00000601919 KRTAP11-1Q8IUC1 163 aa11.53□□□□□ -0.56
SSBP4-212ENST00000601919 PSORS1C2Q9UIG4 136 aa11.53□□□□□ -0.56
SSBP4-212ENST00000601919 KRTAP4-16G5E9R7 235 aaPredicted RBP11.52□□□□□ -0.57
SSBP4-212ENST00000601919 FAM19A1Q7Z5A9 133 aa11.52□□□□□ -0.57
SSBP4-212ENST00000601919 PKHD1P08F94 4074 aa11.51□□□□□ -0.57
SSBP4-212ENST00000601919 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
SSBP4-212ENST00000601919 B5MCH6 92 aa11.51□□□□□ -0.57
SSBP4-212ENST00000601919 SLC25A20O43772 301 aa11.51□□□□□ -0.57
SSBP4-212ENST00000601919 CDK2AP2O75956 126 aa11.51□□□□□ -0.57
SSBP4-212ENST00000601919 Q6ZRX8 168 aa11.51□□□□□ -0.57
SSBP4-212ENST00000601919 UBE2AP49459 152 aa11.5□□□□□ -0.57
SSBP4-212ENST00000601919 C1orf137Q5JT78 98 aa11.5□□□□□ -0.57
SSBP4-212ENST00000601919 H0Y9J4 135 aa11.49□□□□□ -0.57
SSBP4-212ENST00000601919 INAFM2P0DMQ5 153 aa11.49□□□□□ -0.57
SSBP4-212ENST00000601919 A0A1B0GX51 115 aa11.48□□□□□ -0.57
SSBP4-212ENST00000601919 LINC00575Q6W349 94 aa11.48□□□□□ -0.57
SSBP4-212ENST00000601919 LINC00528Q8N1L1 170 aa11.48□□□□□ -0.57
SSBP4-212ENST00000601919 DHRS4-AS1Q9P1J3 65 aa11.48□□□□□ -0.57
SSBP4-212ENST00000601919 DYNC1H1Q14204 4646 aaKnown RBP11.47□□□□□ -0.57
SSBP4-212ENST00000601919 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
SSBP4-212ENST00000601919 ATXN8Q156A1 80 aa11.47□□□□□ -0.57
SSBP4-212ENST00000601919 CLEC2BQ92478 149 aa11.47□□□□□ -0.57
SSBP4-212ENST00000601919 SPCS1Q9Y6A9 102 aa11.47□□□□□ -0.57
SSBP4-212ENST00000601919 hADV29S1A0JD25 119 aa11.45□□□□□ -0.58
SSBP4-212ENST00000601919 TCL1BO95988 128 aa11.45□□□□□ -0.58
SSBP4-212ENST00000601919 LST1O00453 97 aa11.44□□□□□ -0.58
SSBP4-212ENST00000601919 PRLHP81277 87 aa11.44□□□□□ -0.58
SSBP4-212ENST00000601919 GTF2H5Q6ZYL4 71 aa11.44□□□□□ -0.58
SSBP4-212ENST00000601919 DNAL4O96015 105 aa11.43□□□□□ -0.58
SSBP4-212ENST00000601919 TRACP01848 142 aa11.43□□□□□ -0.58
SSBP4-212ENST00000601919 FAM218AQ96MZ4 157 aa11.43□□□□□ -0.58
SSBP4-212ENST00000601919 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
SSBP4-212ENST00000601919 RPL37AP61513 92 aaKnown RBP11.42□□□□□ -0.58
SSBP4-212ENST00000601919 K7EP34 96 aa11.41□□□□□ -0.58
SSBP4-212ENST00000601919 ZNF861PO60384 105 aa11.41□□□□□ -0.58
SSBP4-212ENST00000601919 SMR3BP02814 79 aaPredicted RBP11.41□□□□□ -0.58
SSBP4-212ENST00000601919 KRTAP13-1Q8IUC0 172 aa11.41□□□□□ -0.58
SSBP4-212ENST00000601919 Q9BRP9 147 aa11.41□□□□□ -0.58
SSBP4-212ENST00000601919 HIGD2AQ9BW72 106 aa11.4□□□□□ -0.58
SSBP4-212ENST00000601919 A0A1B0GV90 55 aa11.39□□□□□ -0.59
SSBP4-212ENST00000601919 GHRHP01286 108 aa11.39□□□□□ -0.59
SSBP4-212ENST00000601919 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.38□□□□□ -0.59
SSBP4-212ENST00000601919 SMCR5Q8TEV8 140 aa11.38□□□□□ -0.59
SSBP4-212ENST00000601919 FAM229AH3BQW9 127 aa11.37□□□□□ -0.59
SSBP4-212ENST00000601919 OCIAD2Q56VL3 154 aa11.37□□□□□ -0.59
SSBP4-212ENST00000601919 H3BMG7 143 aa11.36□□□□□ -0.59
SSBP4-212ENST00000601919 H3BQ85 93 aa11.35□□□□□ -0.59
SSBP4-212ENST00000601919 PLA2G1BP04054 148 aaKnown RBP11.35□□□□□ -0.59
SSBP4-212ENST00000601919 Q6ZQY7 126 aa11.34□□□□□ -0.59
SSBP4-212ENST00000601919 ORMDL1Q9P0S3 153 aa11.34□□□□□ -0.59
SSBP4-212ENST00000601919 APOBP04114 4563 aaKnown RBP11.33□□□□□ -0.6
SSBP4-212ENST00000601919 C9JAW5 83 aa11.32□□□□□ -0.6
SSBP4-212ENST00000601919 ERC2-IT1O76042 136 aa11.32□□□□□ -0.6
SSBP4-212ENST00000601919 ZNF706Q9Y5V0 76 aaPredicted RBP11.32□□□□□ -0.6
SSBP4-212ENST00000601919 UBE2V1Q13404 147 aa11.3□□□□□ -0.6
SSBP4-212ENST00000601919 PPDPFLQ8WWR9 84 aa11.3□□□□□ -0.6
SSBP4-212ENST00000601919 TMEM256-PLSCR3K7ERE1 68 aa11.28□□□□□ -0.6
SSBP4-212ENST00000601919 BAALC-AS2P0C853 105 aa11.28□□□□□ -0.6
SSBP4-212ENST00000601919 SPINK6Q6UWN8 80 aa11.28□□□□□ -0.6
SSBP4-212ENST00000601919 TEX49A0A1B0GTD5 131 aa11.27□□□□□ -0.61
SSBP4-212ENST00000601919 H3BT86 120 aa11.27□□□□□ -0.61
SSBP4-212ENST00000601919 ST20-AS1Q8NBB2 130 aa11.27□□□□□ -0.61
SSBP4-212ENST00000601919 DEFB105AQ8NG35 78 aa11.27□□□□□ -0.61
SSBP4-212ENST00000601919 IGLV5-48A0A075B6I7 105 aa11.26□□□□□ -0.61
SSBP4-212ENST00000601919 Q5VSD8 79 aa11.26□□□□□ -0.61
SSBP4-212ENST00000601919 F8W1H4 67 aa11.25□□□□□ -0.61
SSBP4-212ENST00000601919 SPRR4Q96PI1 79 aa11.25□□□□□ -0.61
SSBP4-212ENST00000601919 GAGE2AQ6NT46 116 aa11.24□□□□□ -0.61
SSBP4-212ENST00000601919 Q8N1X5 172 aa11.24□□□□□ -0.61
SSBP4-212ENST00000601919 EPPK1P58107 5090 aaKnown RBP11.23□□□□□ -0.61
SSBP4-212ENST00000601919 KRTAP10-4P60372 401 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-212ENST00000601919 MTURNQ8N3F0 131 aa11.23□□□□□ -0.61
SSBP4-212ENST00000601919 ANKRD29Q8N6D5 301 aa11.23□□□□□ -0.61
SSBP4-212ENST00000601919 SPRR1BP22528 89 aa11.22□□□□□ -0.61
SSBP4-212ENST00000601919 LINC01547P58512 204 aaPredicted RBP11.22□□□□□ -0.61
SSBP4-212ENST00000601919 Q8N377 158 aa11.22□□□□□ -0.61
SSBP4-212ENST00000601919 PRO0461Q9UI25 63 aa11.21□□□□□ -0.61
SSBP4-212ENST00000601919 LINC00483Q53H64 154 aa11.19□□□□□ -0.62
SSBP4-212ENST00000601919 LINC01600Q96MT4 127 aa11.19□□□□□ -0.62
SSBP4-212ENST00000601919 LAMTOR3Q9UHA4 124 aa11.18□□□□□ -0.62
SSBP4-212ENST00000601919 F8WEM9 126 aa11.17□□□□□ -0.62
SSBP4-212ENST00000601919 NDUFV3P56181 108 aaKnown RBP11.17□□□□□ -0.62
SSBP4-212ENST00000601919 SMCPP49901 116 aaPredicted RBP11.16□□□□□ -0.62
SSBP4-212ENST00000601919 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms