RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 C20orf202A1L168 122 aa10.16□□□□□ -0.78
IRF3-230ENST00000601809 ATOH7Q8N100 152 aa10.16□□□□□ -0.78
IRF3-230ENST00000601809 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
IRF3-230ENST00000601809 SPANXCQ9NY87 97 aa10.15□□□□□ -0.78
IRF3-230ENST00000601809 TSPAN13O95857 204 aa10.14□□□□□ -0.79
IRF3-230ENST00000601809 LINC00483Q53H64 154 aa10.14□□□□□ -0.79
IRF3-230ENST00000601809 Q6ZRX8 168 aa10.14□□□□□ -0.79
IRF3-230ENST00000601809 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
IRF3-230ENST00000601809 TRAV23DV6A0A075B6W5 121 aa10.13□□□□□ -0.79
IRF3-230ENST00000601809 S100A7L2Q5SY68 101 aa10.13□□□□□ -0.79
IRF3-230ENST00000601809 LINC00304Q8N9R0 145 aa10.13□□□□□ -0.79
IRF3-230ENST00000601809 ZNF706Q9Y5V0 76 aaPredicted RBP10.13□□□□□ -0.79
IRF3-230ENST00000601809 S100A12P80511 92 aa10.12□□□□□ -0.79
IRF3-230ENST00000601809 PCP2Q8IVA1 136 aa10.12□□□□□ -0.79
IRF3-230ENST00000601809 ZNF73O43830 326 aaPredicted RBP10.11□□□□□ -0.79
IRF3-230ENST00000601809 AKR1D1P51857 326 aa10.11□□□□□ -0.79
IRF3-230ENST00000601809 CTAG1AP78358 180 aa10.11□□□□□ -0.79
IRF3-230ENST00000601809 PPDPFQ9H3Y8 114 aa10.11□□□□□ -0.79
IRF3-230ENST00000601809 PRR4Q16378 134 aa10.08□□□□□ -0.8
IRF3-230ENST00000601809 SNRPEP62304 92 aaKnown RBP10.07□□□□□ -0.8
IRF3-230ENST00000601809 S100A2P29034 98 aa10.06□□□□□ -0.8
IRF3-230ENST00000601809 SCGB1D4Q6XE38 83 aa10.06□□□□□ -0.8
IRF3-230ENST00000601809 IFITM1P13164 125 aa10.05□□□□□ -0.8
IRF3-230ENST00000601809 Q6ZVH6 145 aa10.05□□□□□ -0.8
IRF3-230ENST00000601809 C5orf52A6NGY3 159 aa10.04□□□□□ -0.8
IRF3-230ENST00000601809 GAGE2AQ6NT46 116 aa10.04□□□□□ -0.8
IRF3-230ENST00000601809 LINC00518Q8N0U6 118 aa10.04□□□□□ -0.8
IRF3-230ENST00000601809 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
IRF3-230ENST00000601809 S100A6P06703 90 aa10.03□□□□□ -0.8
IRF3-230ENST00000601809 JOSD1Q15040 202 aaPredicted RBP10.03□□□□□ -0.8
IRF3-230ENST00000601809 MUSTN1Q8IVN3 82 aa10.02□□□□□ -0.81
IRF3-230ENST00000601809 OR13C6PQ8NH95 151 aa10.02□□□□□ -0.81
IRF3-230ENST00000601809 SPAG11AQ6PDA7 123 aa10.01□□□□□ -0.81
IRF3-230ENST00000601809 ST20-AS1Q8NBB2 130 aa10.01□□□□□ -0.81
IRF3-230ENST00000601809 Q8NBF4 154 aa10.01□□□□□ -0.81
IRF3-230ENST00000601809 RETNLBQ9BQ08 111 aa10.01□□□□□ -0.81
IRF3-230ENST00000601809 ELOF1P60002 83 aaKnown RBP10□□□□□ -0.81
IRF3-230ENST00000601809 SPRR1BP22528 89 aa9.98□□□□□ -0.81
IRF3-230ENST00000601809 C6orf99Q4VX62 202 aa9.98□□□□□ -0.81
IRF3-230ENST00000601809 COPS9Q8WXC6 57 aa9.98□□□□□ -0.81
IRF3-230ENST00000601809 MUC17Q685J3 4493 aa9.97□□□□□ -0.81
IRF3-230ENST00000601809 SSBP3-AS1Q7Z2R9 100 aa9.97□□□□□ -0.81
IRF3-230ENST00000601809 TRBV7-6A0A0J9YX20 115 aa9.96□□□□□ -0.82
IRF3-230ENST00000601809 HINT1P49773 126 aaPredicted RBP9.96□□□□□ -0.82
IRF3-230ENST00000601809 MOBPQ13875 183 aa9.96□□□□□ -0.82
IRF3-230ENST00000601809 DHRS4-AS1Q9P1J3 65 aa9.96□□□□□ -0.82
IRF3-230ENST00000601809 IGLV9-49A0A0B4J1Y8 123 aa9.95□□□□□ -0.82
IRF3-230ENST00000601809 COX7BP24311 80 aa9.95□□□□□ -0.82
IRF3-230ENST00000601809 MUC2Q02817 5179 aa9.94□□□□□ -0.82
IRF3-230ENST00000601809 HSBP1L1C9JCN9 74 aa9.93□□□□□ -0.82
IRF3-230ENST00000601809 SPINK1P00995 79 aa9.93□□□□□ -0.82
IRF3-230ENST00000601809 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
IRF3-230ENST00000601809 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
IRF3-230ENST00000601809 SCGB1D1O95968 90 aa9.91□□□□□ -0.82
IRF3-230ENST00000601809 IGLV7-46A0A075B6I9 117 aa9.9□□□□□ -0.82
IRF3-230ENST00000601809 TRAV13-2A0A0B4J235 113 aa9.9□□□□□ -0.82
IRF3-230ENST00000601809 A6NDN8 102 aa9.9□□□□□ -0.82
IRF3-230ENST00000601809 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
IRF3-230ENST00000601809 A0A1B0GWB2 263 aa9.89□□□□□ -0.83
IRF3-230ENST00000601809 COX8AP10176 69 aa9.89□□□□□ -0.83
IRF3-230ENST00000601809 LINC01547P58512 204 aaPredicted RBP9.89□□□□□ -0.83
IRF3-230ENST00000601809 SMIM11BQ8TCY0 68 aa9.89□□□□□ -0.83
IRF3-230ENST00000601809 A4D1N5 150 aa9.88□□□□□ -0.83
IRF3-230ENST00000601809 FP248Q71RG6 208 aaPredicted RBP9.88□□□□□ -0.83
IRF3-230ENST00000601809 Q8N377 158 aa9.88□□□□□ -0.83
IRF3-230ENST00000601809 DLEU1O43261 78 aa9.87□□□□□ -0.83
IRF3-230ENST00000601809 IGLV5-48A0A075B6I7 105 aa9.86□□□□□ -0.83
IRF3-230ENST00000601809 SMIM29Q86T20 159 aa9.86□□□□□ -0.83
IRF3-230ENST00000601809 C9orf153Q5TBE3 101 aa9.85□□□□□ -0.83
IRF3-230ENST00000601809 TEX49A0A1B0GTD5 131 aa9.82□□□□□ -0.84
IRF3-230ENST00000601809 KRTAP13-3Q3SY46 172 aa9.82□□□□□ -0.84
IRF3-230ENST00000601809 SLC25A34Q6PIV7 304 aa9.82□□□□□ -0.84
IRF3-230ENST00000601809 LAMTOR3Q9UHA4 124 aa9.81□□□□□ -0.84
IRF3-230ENST00000601809 TAL2Q16559 108 aa9.8□□□□□ -0.84
IRF3-230ENST00000601809 C2orf91Q6ZV80 131 aa9.8□□□□□ -0.84
IRF3-230ENST00000601809 C14orf144Q96I85 54 aa9.8□□□□□ -0.84
IRF3-230ENST00000601809 SPATA45Q537H7 98 aa9.79□□□□□ -0.84
IRF3-230ENST00000601809 DEFB105AQ8NG35 78 aa9.79□□□□□ -0.84
IRF3-230ENST00000601809 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
IRF3-230ENST00000601809 HIGD1BQ9P298 99 aa9.79□□□□□ -0.84
IRF3-230ENST00000601809 PAM16Q9Y3D7 125 aa9.79□□□□□ -0.84
IRF3-230ENST00000601809 SLC25A20O43772 301 aa9.78□□□□□ -0.84
IRF3-230ENST00000601809 Q1RN00 199 aa9.78□□□□□ -0.84
IRF3-230ENST00000601809 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
IRF3-230ENST00000601809 CDIP1Q9H305 208 aa9.78□□□□□ -0.84
IRF3-230ENST00000601809 C12orf57Q99622 126 aa9.76□□□□□ -0.85
IRF3-230ENST00000601809 NHP2Q9NX24 153 aaKnown RBP9.76□□□□□ -0.85
IRF3-230ENST00000601809 VAMP8Q9BV40 100 aa9.75□□□□□ -0.85
IRF3-230ENST00000601809 CFC1BP0CG36 223 aa9.74□□□□□ -0.85
IRF3-230ENST00000601809 CFC1P0CG37 223 aa9.74□□□□□ -0.85
IRF3-230ENST00000601809 CD164Q04900 197 aa9.74□□□□□ -0.85
IRF3-230ENST00000601809 PYY3Q5JQD4 70 aa9.73□□□□□ -0.85
IRF3-230ENST00000601809 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
IRF3-230ENST00000601809 VAMP3Q15836 100 aa9.72□□□□□ -0.85
IRF3-230ENST00000601809 HRCT1Q6UXD1 115 aa9.71□□□□□ -0.86
IRF3-230ENST00000601809 A0A0G2JQZ4 141 aa9.7□□□□□ -0.86
IRF3-230ENST00000601809 hADV29S1A0JD25 119 aa9.7□□□□□ -0.86
IRF3-230ENST00000601809 Q5XG85 94 aa9.7□□□□□ -0.86
IRF3-230ENST00000601809 Q6ZQY7 126 aa9.7□□□□□ -0.86
IRF3-230ENST00000601809 A0A0B4J2C4 111 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms