RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 HERC1Q15751 4861 aa8.3□□□□□ -1.08
SNRPA-208ENST00000600456 ETDCA0A1B0GVM5 59 aa8.3□□□□□ -1.08
SNRPA-208ENST00000600456 KRTAP1-4P0C5Y4 121 aa8.3□□□□□ -1.08
SNRPA-208ENST00000600456 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
SNRPA-208ENST00000600456 TRAV23DV6A0A075B6W5 121 aa8.29□□□□□ -1.08
SNRPA-208ENST00000600456 KRTAP4-16G5E9R7 235 aaPredicted RBP8.29□□□□□ -1.08
SNRPA-208ENST00000600456 DLEU1O43261 78 aa8.29□□□□□ -1.08
SNRPA-208ENST00000600456 COX8AP10176 69 aa8.29□□□□□ -1.08
SNRPA-208ENST00000600456 VAMP8Q9BV40 100 aa8.29□□□□□ -1.08
SNRPA-208ENST00000600456 MUSTN1Q8IVN3 82 aa8.28□□□□□ -1.08
SNRPA-208ENST00000600456 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
SNRPA-208ENST00000600456 OR13C6PQ8NH95 151 aa8.27□□□□□ -1.09
SNRPA-208ENST00000600456 HIGD2AQ9BW72 106 aa8.27□□□□□ -1.09
SNRPA-208ENST00000600456 PAM16Q9Y3D7 125 aa8.27□□□□□ -1.09
SNRPA-208ENST00000600456 B5MCH6 92 aa8.26□□□□□ -1.09
SNRPA-208ENST00000600456 ZNF73O43830 326 aaPredicted RBP8.26□□□□□ -1.09
SNRPA-208ENST00000600456 SPATA45Q537H7 98 aa8.26□□□□□ -1.09
SNRPA-208ENST00000600456 PRR26Q8N8Z3 221 aa8.26□□□□□ -1.09
SNRPA-208ENST00000600456 FAM229BQ4G0N7 80 aa8.24□□□□□ -1.09
SNRPA-208ENST00000600456 PYY3Q5JQD4 70 aa8.24□□□□□ -1.09
SNRPA-208ENST00000600456 Q6ZRX8 168 aa8.24□□□□□ -1.09
SNRPA-208ENST00000600456 CRYGAP11844 174 aa8.23□□□□□ -1.09
SNRPA-208ENST00000600456 HINT1P49773 126 aaPredicted RBP8.23□□□□□ -1.09
SNRPA-208ENST00000600456 C14orf144Q96I85 54 aa8.23□□□□□ -1.09
SNRPA-208ENST00000600456 ZNF706Q9Y5V0 76 aaPredicted RBP8.23□□□□□ -1.09
SNRPA-208ENST00000600456 TNXBP22105 4242 aa8.23□□□□□ -1.09
SNRPA-208ENST00000600456 TRAV13-2A0A0B4J235 113 aa8.22□□□□□ -1.09
SNRPA-208ENST00000600456 SLC25A34Q6PIV7 304 aa8.22□□□□□ -1.09
SNRPA-208ENST00000600456 HIGD1BQ9P298 99 aa8.22□□□□□ -1.09
SNRPA-208ENST00000600456 A6NDN8 102 aa8.21□□□□□ -1.1
SNRPA-208ENST00000600456 SMCR5Q8TEV8 140 aa8.21□□□□□ -1.1
SNRPA-208ENST00000600456 HIST1H4GQ99525 98 aa8.21□□□□□ -1.1
SNRPA-208ENST00000600456 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
SNRPA-208ENST00000600456 A0A087X002 238 aa8.19□□□□□ -1.1
SNRPA-208ENST00000600456 A4D1N5 150 aa8.19□□□□□ -1.1
SNRPA-208ENST00000600456 Q9BRP9 147 aa8.19□□□□□ -1.1
SNRPA-208ENST00000600456 TRBV7-6A0A0J9YX20 115 aa8.18□□□□□ -1.1
SNRPA-208ENST00000600456 C6orf99Q4VX62 202 aa8.18□□□□□ -1.1
SNRPA-208ENST00000600456 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
SNRPA-208ENST00000600456 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
SNRPA-208ENST00000600456 COX7BP24311 80 aa8.16□□□□□ -1.1
SNRPA-208ENST00000600456 ELOF1P60002 83 aaKnown RBP8.16□□□□□ -1.1
SNRPA-208ENST00000600456 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
SNRPA-208ENST00000600456 DHRS4-AS1Q9P1J3 65 aa8.16□□□□□ -1.1
SNRPA-208ENST00000600456 ERC2-IT1O76042 136 aa8.15□□□□□ -1.1
SNRPA-208ENST00000600456 TAL2Q16559 108 aa8.15□□□□□ -1.1
SNRPA-208ENST00000600456 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
SNRPA-208ENST00000600456 KRTAP13-2Q52LG2 175 aa8.14□□□□□ -1.11
SNRPA-208ENST00000600456 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
SNRPA-208ENST00000600456 SMIM11BQ8TCY0 68 aa8.13□□□□□ -1.11
SNRPA-208ENST00000600456 GAGE2AQ6NT46 116 aa8.12□□□□□ -1.11
SNRPA-208ENST00000600456 C12orf57Q99622 126 aa8.11□□□□□ -1.11
SNRPA-208ENST00000600456 UQCR10Q9UDW1 63 aa8.11□□□□□ -1.11
SNRPA-208ENST00000600456 HMCN2Q8NDA2 5059 aa8.11□□□□□ -1.11
SNRPA-208ENST00000600456 VAMP3Q15836 100 aa8.1□□□□□ -1.11
SNRPA-208ENST00000600456 CEND1Q8N111 149 aa8.1□□□□□ -1.11
SNRPA-208ENST00000600456 A0A0B4J2C4 111 aa8.09□□□□□ -1.11
SNRPA-208ENST00000600456 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
SNRPA-208ENST00000600456 NHP2Q9NX24 153 aaKnown RBP8.09□□□□□ -1.11
SNRPA-208ENST00000600456 CFC1BP0CG36 223 aa8.08□□□□□ -1.12
SNRPA-208ENST00000600456 CFC1P0CG37 223 aa8.08□□□□□ -1.12
SNRPA-208ENST00000600456 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
SNRPA-208ENST00000600456 HSD52Q0P140 79 aa8.08□□□□□ -1.12
SNRPA-208ENST00000600456 C3orf22Q8N5N4 141 aa8.08□□□□□ -1.12
SNRPA-208ENST00000600456 ST20-AS1Q8NBB2 130 aa8.08□□□□□ -1.12
SNRPA-208ENST00000600456 RAB37Q96AX2 223 aa8.08□□□□□ -1.12
SNRPA-208ENST00000600456 SMIM6P0DI80 62 aa8.07□□□□□ -1.12
SNRPA-208ENST00000600456 SPRR1BP22528 89 aa8.07□□□□□ -1.12
SNRPA-208ENST00000600456 CTAG1AP78358 180 aa8.07□□□□□ -1.12
SNRPA-208ENST00000600456 LINC00304Q8N9R0 145 aa8.07□□□□□ -1.12
SNRPA-208ENST00000600456 SLC25A20O43772 301 aa8.05□□□□□ -1.12
SNRPA-208ENST00000600456 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
SNRPA-208ENST00000600456 FXYD2P54710 66 aa8.04□□□□□ -1.12
SNRPA-208ENST00000600456 SPAG11AQ6PDA7 123 aa8.04□□□□□ -1.12
SNRPA-208ENST00000600456 IGLV9-49A0A0B4J1Y8 123 aa8.03□□□□□ -1.12
SNRPA-208ENST00000600456 LINC00575Q6W349 94 aa8.03□□□□□ -1.12
SNRPA-208ENST00000600456 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
SNRPA-208ENST00000600456 PRO1854Q9UHT4 67 aa8.03□□□□□ -1.12
SNRPA-208ENST00000600456 IGLV5-48A0A075B6I7 105 aa8.02□□□□□ -1.13
SNRPA-208ENST00000600456 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
SNRPA-208ENST00000600456 H7C2G1 150 aa8.02□□□□□ -1.13
SNRPA-208ENST00000600456 TSPAN13O95857 204 aa8.02□□□□□ -1.13
SNRPA-208ENST00000600456 MOBPQ13875 183 aa8.02□□□□□ -1.13
SNRPA-208ENST00000600456 Q8NBF4 154 aa8.02□□□□□ -1.13
SNRPA-208ENST00000600456 LAMTOR3Q9UHA4 124 aa8.01□□□□□ -1.13
SNRPA-208ENST00000600456 hADV29S1A0JD25 119 aa8□□□□□ -1.13
SNRPA-208ENST00000600456 DEFB105AQ8NG35 78 aa8□□□□□ -1.13
SNRPA-208ENST00000600456 LOC105371267A0A1B0GV96 52 aa7.99□□□□□ -1.13
SNRPA-208ENST00000600456 H0YGX0 51 aa7.99□□□□□ -1.13
SNRPA-208ENST00000600456 Q1RN00 199 aa7.99□□□□□ -1.13
SNRPA-208ENST00000600456 C9orf153Q5TBE3 101 aa7.99□□□□□ -1.13
SNRPA-208ENST00000600456 LINC01547P58512 204 aaPredicted RBP7.98□□□□□ -1.13
SNRPA-208ENST00000600456 PRO1933Q9H354 126 aa7.98□□□□□ -1.13
SNRPA-208ENST00000600456 SPINK1P00995 79 aa7.97□□□□□ -1.13
SNRPA-208ENST00000600456 SNCGO76070 127 aa7.96□□□□□ -1.14
SNRPA-208ENST00000600456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.96□□□□□ -1.14
SNRPA-208ENST00000600456 Q6ZQY7 126 aa7.96□□□□□ -1.14
SNRPA-208ENST00000600456 SMIM29Q86T20 159 aa7.95□□□□□ -1.14
SNRPA-208ENST00000600456 Q8N377 158 aa7.95□□□□□ -1.14
SNRPA-208ENST00000600456 K7ERJ3 54 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms