RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 RPL37AP61513 92 aaKnown RBP12.05□□□□□ -0.48
PNKP-207ENST00000596014 PRO0461Q9UI25 63 aa12.05□□□□□ -0.48
PNKP-207ENST00000596014 F8W1H4 67 aa12.04□□□□□ -0.48
PNKP-207ENST00000596014 TRIAP1O43715 76 aa12.04□□□□□ -0.48
PNKP-207ENST00000596014 KRTAP10-4P60372 401 aaPredicted RBP12.04□□□□□ -0.48
PNKP-207ENST00000596014 M0QXV9 152 aa12.03□□□□□ -0.48
PNKP-207ENST00000596014 SCGB1C2P0DMR2 95 aa12.03□□□□□ -0.48
PNKP-207ENST00000596014 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
PNKP-207ENST00000596014 OCIAD2Q56VL3 154 aa12.02□□□□□ -0.49
PNKP-207ENST00000596014 MTURNQ8N3F0 131 aa12.02□□□□□ -0.49
PNKP-207ENST00000596014 C22orf24Q9Y442 160 aa12.02□□□□□ -0.49
PNKP-207ENST00000596014 PRR3P79522 188 aaKnown RBP11.97□□□□□ -0.49
PNKP-207ENST00000596014 KRTAP11-1Q8IUC1 163 aa11.97□□□□□ -0.49
PNKP-207ENST00000596014 IGLV5-37A0A075B6J1 123 aa11.97□□□□□ -0.49
PNKP-207ENST00000596014 ATXN8Q156A1 80 aa11.97□□□□□ -0.49
PNKP-207ENST00000596014 COX6CP09669 75 aa11.96□□□□□ -0.5
PNKP-207ENST00000596014 INAFM2P0DMQ5 153 aa11.96□□□□□ -0.5
PNKP-207ENST00000596014 UBE2BP63146 152 aa11.96□□□□□ -0.5
PNKP-207ENST00000596014 MRPL55Q7Z7F7 128 aaKnown RBP11.96□□□□□ -0.5
PNKP-207ENST00000596014 PSORS1C2Q9UIG4 136 aa11.96□□□□□ -0.5
PNKP-207ENST00000596014 TRAV13-2A0A0B4J235 113 aa11.95□□□□□ -0.5
PNKP-207ENST00000596014 K7ERU9 68 aa11.95□□□□□ -0.5
PNKP-207ENST00000596014 VPREB1P12018 145 aa11.95□□□□□ -0.5
PNKP-207ENST00000596014 SMCPP49901 116 aaPredicted RBP11.95□□□□□ -0.5
PNKP-207ENST00000596014 NKAPP1Q8N9T2 125 aa11.95□□□□□ -0.5
PNKP-207ENST00000596014 Q8NDZ9 215 aa11.95□□□□□ -0.5
PNKP-207ENST00000596014 IGKV2-28A0A075B6P5 120 aa11.94□□□□□ -0.5
PNKP-207ENST00000596014 IGKV2D-28P01615 120 aa11.94□□□□□ -0.5
PNKP-207ENST00000596014 PCLOQ9Y6V0 5065 aa11.94□□□□□ -0.5
PNKP-207ENST00000596014 FLG2Q5D862 2391 aaPredicted RBP11.94□□□□□ -0.5
PNKP-207ENST00000596014 LINC00167Q96N53 147 aa11.94□□□□□ -0.5
PNKP-207ENST00000596014 LINC00337Q8N6G1 96 aa11.93□□□□□ -0.5
PNKP-207ENST00000596014 PKHD1L1Q86WI1 4243 aa11.92□□□□□ -0.5
PNKP-207ENST00000596014 C9JAW5 83 aa11.91□□□□□ -0.5
PNKP-207ENST00000596014 ETDBQ3ZM63 59 aa11.91□□□□□ -0.5
PNKP-207ENST00000596014 CLEC2BQ92478 149 aa11.91□□□□□ -0.5
PNKP-207ENST00000596014 C1orf137Q5JT78 98 aa11.91□□□□□ -0.5
PNKP-207ENST00000596014 RPL37AP8A6NKH3 93 aa11.9□□□□□ -0.5
PNKP-207ENST00000596014 LST1O00453 97 aa11.9□□□□□ -0.5
PNKP-207ENST00000596014 SLC25A20O43772 301 aa11.89□□□□□ -0.51
PNKP-207ENST00000596014 MYCBP2O75592 4640 aa11.89□□□□□ -0.51
PNKP-207ENST00000596014 RPL28P46779 137 aaKnown RBP11.87□□□□□ -0.51
PNKP-207ENST00000596014 NDUFC2O95298 119 aa11.86□□□□□ -0.51
PNKP-207ENST00000596014 TRBV10-2A0A0K0K1G8 114 aa11.85□□□□□ -0.51
PNKP-207ENST00000596014 M0R378 163 aa11.85□□□□□ -0.51
PNKP-207ENST00000596014 TEN1Q86WV5 123 aa11.85□□□□□ -0.51
PNKP-207ENST00000596014 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
PNKP-207ENST00000596014 IGLV1-50A0A075B6I6 118 aa11.84□□□□□ -0.51
PNKP-207ENST00000596014 IGLV7-43P04211 117 aa11.84□□□□□ -0.51
PNKP-207ENST00000596014 LINC01600Q96MT4 127 aa11.84□□□□□ -0.51
PNKP-207ENST00000596014 NCR3O14931 201 aa11.83□□□□□ -0.52
PNKP-207ENST00000596014 SMIM11BQ8TCY0 68 aa11.83□□□□□ -0.52
PNKP-207ENST00000596014 H3BT86 120 aa11.82□□□□□ -0.52
PNKP-207ENST00000596014 LRP1Q07954 4544 aaKnown RBP11.82□□□□□ -0.52
PNKP-207ENST00000596014 J3QR89 54 aa11.81□□□□□ -0.52
PNKP-207ENST00000596014 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
PNKP-207ENST00000596014 OR13C6PQ8NH95 151 aa11.81□□□□□ -0.52
PNKP-207ENST00000596014 PPDPFLQ8WWR9 84 aa11.81□□□□□ -0.52
PNKP-207ENST00000596014 VPS25Q9BRG1 176 aa11.8□□□□□ -0.52
PNKP-207ENST00000596014 FAT3Q8TDW7 4589 aa11.79□□□□□ -0.52
PNKP-207ENST00000596014 BCE1O60756 84 aa11.79□□□□□ -0.52
PNKP-207ENST00000596014 TRACP01848 142 aa11.79□□□□□ -0.52
PNKP-207ENST00000596014 FAM218AQ96MZ4 157 aa11.78□□□□□ -0.52
PNKP-207ENST00000596014 REG3GQ6UW15 175 aa11.77□□□□□ -0.53
PNKP-207ENST00000596014 TMEM126AQ9H061 195 aa11.77□□□□□ -0.53
PNKP-207ENST00000596014 TRBV10-3A0A0K0K1G6 114 aa11.76□□□□□ -0.53
PNKP-207ENST00000596014 ZNF861PO60384 105 aa11.75□□□□□ -0.53
PNKP-207ENST00000596014 PCP4P48539 62 aa11.75□□□□□ -0.53
PNKP-207ENST00000596014 H0YGX0 51 aa11.74□□□□□ -0.53
PNKP-207ENST00000596014 KCNQ1DNQ9H478 68 aa11.74□□□□□ -0.53
PNKP-207ENST00000596014 DIRC1Q969H9 104 aa11.73□□□□□ -0.53
PNKP-207ENST00000596014 S100A7L2Q5SY68 101 aa11.72□□□□□ -0.53
PNKP-207ENST00000596014 PRYO14603 147 aa11.71□□□□□ -0.53
PNKP-207ENST00000596014 IGLV6-57P01721 117 aa11.71□□□□□ -0.53
PNKP-207ENST00000596014 KRTAP13-1Q8IUC0 172 aa11.71□□□□□ -0.54
PNKP-207ENST00000596014 KRTAP29-1A8MX34 341 aaPredicted RBP11.7□□□□□ -0.54
PNKP-207ENST00000596014 H0Y9J4 135 aa11.7□□□□□ -0.54
PNKP-207ENST00000596014 UBE2AP49459 152 aa11.7□□□□□ -0.54
PNKP-207ENST00000596014 FAM19A1Q7Z5A9 133 aa11.7□□□□□ -0.54
PNKP-207ENST00000596014 OXTP01178 125 aa11.69□□□□□ -0.54
PNKP-207ENST00000596014 SPRR1AP35321 89 aa11.69□□□□□ -0.54
PNKP-207ENST00000596014 PRLHP81277 87 aa11.68□□□□□ -0.54
PNKP-207ENST00000596014 DMBT1Q9UGM3 2413 aaPredicted RBP11.68□□□□□ -0.54
PNKP-207ENST00000596014 DNAL4O96015 105 aa11.68□□□□□ -0.54
PNKP-207ENST00000596014 TEX49A0A1B0GTD5 131 aa11.66□□□□□ -0.54
PNKP-207ENST00000596014 KRTAP4-16G5E9R7 235 aaPredicted RBP11.66□□□□□ -0.54
PNKP-207ENST00000596014 TRAV23DV6A0A075B6W5 121 aa11.65□□□□□ -0.55
PNKP-207ENST00000596014 BAALC-AS2P0C853 105 aa11.64□□□□□ -0.55
PNKP-207ENST00000596014 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
PNKP-207ENST00000596014 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
PNKP-207ENST00000596014 A0A1B0GX51 115 aa11.63□□□□□ -0.55
PNKP-207ENST00000596014 J3QL48 77 aa11.62□□□□□ -0.55
PNKP-207ENST00000596014 ZNF73O43830 326 aaPredicted RBP11.61□□□□□ -0.55
PNKP-207ENST00000596014 TNXBP22105 4242 aa11.6□□□□□ -0.55
PNKP-207ENST00000596014 B5MCH6 92 aa11.6□□□□□ -0.55
PNKP-207ENST00000596014 KRTAP1-4P0C5Y4 121 aa11.6□□□□□ -0.55
PNKP-207ENST00000596014 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
PNKP-207ENST00000596014 CDIP1Q9H305 208 aa11.59□□□□□ -0.55
PNKP-207ENST00000596014 MT1HL1P0DM35 61 aa11.58□□□□□ -0.56
PNKP-207ENST00000596014 ORMDL1Q9P0S3 153 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms